Geospiza fortis (medium ground-finch): 102040564
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Entry
102040564 CDS
T03755
Symbol
TRIM36
Name
(RefSeq) tripartite motif containing 36
KO
K12013
tripartite motif-containing protein 36 [EC:
2.3.2.27
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gfr04131
]
102040564 (TRIM36)
04121 Ubiquitin system [BR:
gfr04121
]
102040564 (TRIM36)
Enzymes [BR:
gfr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102040564 (TRIM36)
Membrane trafficking [BR:
gfr04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
102040564 (TRIM36)
Ubiquitin system [BR:
gfr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102040564 (TRIM36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COS
zf-B_box
ANCHR-like_BBOX
SPRY
fn3
Phasin
DUF4200
IBR
Motif
Other DBs
NCBI-GeneID:
102040564
NCBI-ProteinID:
XP_005425396
UniProt:
A0A6I9HP17
LinkDB
All DBs
Position
Un
AA seq
641 aa
AA seq
DB search
MDRIDRINRSGRKRNSLTPRSTLFPCPSCQRDIDLGERGINGLFRNFTLETIVERYRQAA
RAAIAIMCDFCKPPPQESTKSCMDCSASYCNECFKIHHPWGTVKAQHEYVGPTTNFRPKI
LMCPEHEMERVNMYCEICRRPVCHLCKLGGGHANHRVTTMSTAYKTLKEKLSKDIEYLIS
KECQVKAHITQLDLLLKETECNSERAKQEASQSFEKLYCVLEEKKSAALRAIETSKNIRL
EKLQTQVEEYQGLLENNGLVGYAQEVLKETDPSCFVQTAKQLHVRIQKATESLKSFRPAA
ETTFEDFVVDTAKQEDILGDLSFHSNGLGIPEINEEQSRMYNKTLISWECSGKTDSADIY
VLEYHKLNKEEESVTWQKTEVCGKSKVLSDLDDDSSYAFRVRAYKGSICSPWSREVIMRT
PPAPVFSFLFDDKCGYNNEHLQLNPRRTSVESRAGFPLLLGSERLQVGCFTTLDYIIGDT
GIAKGKHFWAFNVEAYSYLVKVGVVPSSKIQKLFHNTSDVISPRYEQDSGHDSGSEDTFF
DSSQPCTLVTLGMKKFFIPATPAAPKDPASRILPLPSCLGVCLDCDRGRVGFYDAGRMKC
LYECEVDCSGLMYPAFALMGGAAVHLEEAVTAEDREYHDDI
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggacagaattgacaggattaatagatcaggtagaaaacgcaattcactgactcctaga
tcgactctgtttccttgtccgagttgccagcgggatattgatcttggggagcgtggcatc
aatggcttatttcgcaacttcactttggaaaccattgtggaaagatacagacaggcagcc
agggcagccattgctattatgtgtgatttctgcaaacctccacctcaggagtccacaaag
agttgcatggactgcagtgcaagctattgcaatgaatgtttcaaaatacaccatccttgg
ggaacagtgaaagcccagcatgaatacgtaggaccaaccaccaacttcagacccaagatt
ttgatgtgtccagaacatgaaatggagagagtaaacatgtactgtgaaatctgcagaagg
cctgtttgtcatctttgcaaactgggtggaggtcatgcaaaccatagagtaacaaccatg
agcactgcctacaaaacccttaaggagaaactttcaaaagatatcgagtacctcatcagt
aaggagtgccaggtgaaagctcacatcacacagctggatctgctgctgaaagaaacagag
tgcaacagtgaaagagctaaacaagaagcatctcagagttttgagaaattatattgtgtc
ctggaagagaagaaatctgcagctcttagggcaatcgaaacttctaagaatataaggttg
gaaaaattgcaaacacaagtggaagaataccaaggactcctggaaaataatggccttgta
ggatatgctcaagaagtgcttaaagaaacggatccctcttgtttcgttcaaacagcaaaa
caacttcatgtcagaatccaaaaagctactgagtctctgaagagctttaggccagcagct
gaaactacttttgaagactttgtggtggacactgccaagcaagaagacatccttggtgac
ttgtccttccattccaacggtctaggaataccagaaatcaacgaagagcagagcagaatg
tacaacaaaactcttatcagctgggaatgctctgggaagacagattcagctgatatctat
gtccttgagtatcataaacttaataaagaagaggagagtgtgacatggcagaagactgaa
gtgtgtggcaagagcaaagtattatctgatctcgatgatgacagcagctacgcctttaga
gttcgagcttacaaagggtctatctgcagcccttggagccgagaagttattatgcgtact
cctccagctccagttttcagttttctttttgatgacaaatgtgggtacaacaatgaacat
ctccagctgaacccaagaagaacatctgtggaaagtagggctggatttcctctgcttctg
ggatctgagcgcttgcaggttggatgcttcacaaccctggattacatcattggtgacact
gggattgccaaagggaagcacttctgggcttttaatgtggaagcctactcatacctggtg
aaagtgggagttgtccctagcagcaagatacagaaattgttccacaatacctctgatgtt
atcagtccaagatacgagcaagacagcggtcatgacagtgggagtgaagataccttcttt
gactcatcgcagccttgcacactggtcactttaggcatgaagaagttctttatccctgcc
acacctgctgctcccaaggatccggccagcagaatccttcccctgccatcgtgcttgggc
gtctgccttgactgtgacagaggcagggtagggttttatgatgcaggccgtatgaagtgc
ctgtatgagtgtgaggtggattgctctggcctgatgtacccagcgtttgctctgatgggc
ggtgcggcagtgcaccttgaggaggctgtcacagccgaggacagggagtaccatgatgac
atctag
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integrated database retrieval system
