Geospiza fortis (medium ground-finch): 102040577
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Entry
102040577 CDS
T03755
Symbol
PKD1L2
Name
(RefSeq) polycystin 1 like 2
KO
K04988
polycystin 1L2
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gfr04040
]
102040577 (PKD1L2)
04091 Lectins [BR:
gfr04091
]
102040577 (PKD1L2)
Ion channels [BR:
gfr04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
102040577 (PKD1L2)
Lectins [BR:
gfr04091
]
C-Type lectins
Others
102040577 (PKD1L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
SUEL_Lectin
Lectin_C
Ion_trans
GPS
REJ
AGA2
Motif
Other DBs
NCBI-GeneID:
102040577
NCBI-ProteinID:
XP_014165711
LinkDB
All DBs
Position
Un
AA seq
2144 aa
AA seq
DB search
MWLGITVLISLAVSLAVEEATDEGIPCSKYQQAFNHSCYEFVRLQQTFTGAQSWCERGGG
HLVFIKNEETQEFLQKHIAENQEWWIGLISNSLLNETTDGSITWLDTSNIIYSNWYKDQP
SPFSSMCGYILKNAKYQWGVTENCSQEFDFICEFESGQSIACDNSNATVQCGSGEVIQIE
ESFYGRKTPHYCVSETSLQFNRDEGCSWLSVKDEVAGQCHGLQACQVAADGTFFGDPCPA
LGSYLSIQYHCKEGLQLVMKDTCFVFENITVTLIWLLSPYSGNLSCTISTGDGHTIDPYY
PLTLVSNLTYRYSSPGEFSVFVECTSSEWHVMAQKQVTVQEQEDQLSITGCYSQYEAGNS
SRCRTLYGELLWIQVQLTGGNGVTYSVLADNMTLSESRAKEGLVPHNLTLGRASQELIGP
GMHQLEIRASRSTMASQISATIAVHLIEPVSGIQAAVASHTLQLGQDLEVNVSVSHGAPE
ELMFEVTGSNQSQWHKADGPRGELRAYSIPVPWEGTYLVKVVAMNDFSNMSLDLGFITVL
ANSSHKEAPGCALSPEHGTVLTAFRVSCSAPGSASPGGQLTYCFYVTPDSLLDCSPDPEL
FPVYLPLGEEENDFILHVKIIVSNNFGDTVQTNASVKVGPADMIDGNLTLQAVVSEKANT
ILKDGNSSMSLFQLYKSVTSVLNQQIQEESFNMSLPTDTRKETALKMSEVLKEITYRSEE
LSVSAQVEASNTLKHVSASLLTVNTEHSRDGQELKEAANYLFNASSVSHQLLRTVENLQS
ALLFGKAPGDEPTVLTSPSATMYMHRLQTENMDSTSINISSSSSASFTLPPASSLNISGV
DGETVDIRMVSFAMNPFFSSDSSFDISGTVGGLSLTGLDGLIIPVSNLKENIEIMLPRLS
ATEEDKILLNLGNYSTFQVNVTSENTSIVIHLESEHDIPLILYLGYGYHPNETNYDMKNH
LFCKKTSGGETNSWVLSPELIFGEGTYYFMVLQDMGMDSTVYNGLTINATCFASHCVFWD
EHQGGWNSYGCRVGPKTNPSSTQCLCNHLTFFGSSFFVIPNAIDVSKTAQLFGTFVDNPV
VVTTVGCIFLIYVLVVIWARRKDIQDDAKVKITVLEDNDPFAQYRYLVTVFTGHRRGAAT
TSKVTLTLYGLDGESEPHHLNDPDTPVFERGGVDVFLLCTFFPLGELQSIRLWHDNSGDS
PSWYVNRVLVHDLAWDQKWYFLCNSWLAIDIGECVLDKVFPVATEQDMKQFSNLFFMKTS
KGFQDGHIWYSVFSRSPRSSFTRAQRVSCCFSLLLCTMLTSIMFWGVPKDPAEQKMDLGK
IEFTWQEVMIGFESSLLMFPINLLIVQIFRNVRPRPAQLGREKKPGKNGRVSPSLPPTPG
ATQAASLTPEADIRRIANSLFKALKTPSLTSAPDFEKLANINTLLSLVEDVICQNRAGQG
FCDESKKDGPIIVTLGAMDIQEKTRSPTPEKRICDQLKYSGYHRCLWSHTPNLSSDDKKS
SSPRGLPWWFVFIAWFLVAATSSVSGFFTMLYGLHYGKENSIKWLISMVISFLESLFITQ
PLKVLGFAAFFALVLKKMEHEDEENTAIDGPLSAPGDSHPLFGVRRDSRSNIYRPPPAAD
VEKMKISHMKEQKAFALIREILAYLGFLWMLLLVAYGQRDPNSYYLNKHIEDSFTDGFHD
VYSYQDFFTWANTTLLKNLYGSYKGFITDGNSKLVGSARIRQVRVKGDTCSISPRLQHVV
EECHAPYSLQTEDTSVYGEHWNTSAPDNSSDLSSAWQYQSQSKLRGYPSWGKFAVYSGGG
YVIHLGTDPKNASRILQYLFNNVWLDTFTRAVFVEFTVYNANVNLFCIISLMFESNALGA
FFTSAELQSVRLYPYTDSLHIFVVAAEIIYFLFIVYYMIVQGKLLKSLRWRYFHSKWNLL
EMAIILISWSALSVFVKRTVLGTRDISYYQEHKEDSVSFSETARADAVLGYLIAFLVLLS
TVKLWHLLRLNPKLNMITSTLRRAWGDISGFITVIAIMFLAYSIAANLIFGWKLYSYKTL
LDSAETMVSLQLGIFNYEEVLDYNPILGSFLIGSCIVFMTFVVLNLFISVILVAFSEEQK
HYQASEEEEIVDLMLMKLFSFFGIKCKKEEKPVTGEQLEQPVSK
NT seq
6435 nt
NT seq
+upstream
nt +downstream
nt
atgtggctggggatcacagttctgatttctcttgctgtgagtttggctgtggaggaagca
actgatgaaggaataccttgttcaaagtaccagcaagctttcaaccattcatgctatgag
tttgttagactccagcaaaccttcacaggtgcccagagctggtgtgagagaggaggaggg
catcttgtctttattaaaaatgaagaaactcaagagttcttgcaaaaacatattgctgag
aatcaggaatggtggataggactgatctcaaactccttgctgaatgaaactactgatggg
tcaataacttggctggacacttcaaatatcatctacagtaactggtacaaggatcagcca
tctcccttctcatccatgtgtgggtacatcctgaagaatgccaagtatcagtggggtgtg
actgaaaattgcagccaggaatttgacttcatttgcgagtttgaatctggccagagcatc
gcttgtgataattccaatgccactgtacagtgtggatcaggagaagtgattcaaattgaa
gagagcttctatgggaggaagacccctcactactgtgtgtcagagacttctctgcagttt
aacagagatgaaggctgcagctggctcagtgtcaaggatgaagtagcaggccagtgtcac
gggctgcaggcctgccaggtggcagcagatggcacgttctttggagatccttgtccagct
ttgggaagctatttgtcaattcaataccactgcaaggaaggtctgcagctggttatgaaa
gacacatgttttgtctttgaaaatatcacagtcactttgatctggctgctttcaccatat
tctgggaacctttcctgtaccattagcactggagatggtcacaccattgatccttactac
cctctaacactggtcagcaacctcacatacaggtactcctctcctggggagtttagtgtt
tttgtggagtgcaccagcagcgagtggcacgtgatggcccagaagcaggtgacagttcaa
gagcaggaggatcagctcagcattaccgggtgctacagccagtacgaggcagggaacagc
tcccgctgccgaacactctatggggagctgctctggatccaggttcagctcactggaggc
aatggagtaacctacagcgtgttagcagataacatgacactgagtgaatccagggcaaag
gaaggtcttgtcccccataacctgacactgggcagggcctctcaagaactgataggccca
gggatgcaccagctggagatccgagcatccaggagcacgatggcatcgcagatctctgcg
actattgctgttcatttaattgagccagtatctggaattcaggctgcagtggcttcccac
actctgcagctggggcaggatttggaggtgaatgtctctgtgtcccatggtgccccagag
gagctgatgtttgaggtgactggatccaaccaaagccagtggcacaaagcagacggccct
cgtggggagctgcgggcgtacagcattcctgtgccctgggaaggtacttatctagtgaaa
gtggtggccatgaatgacttctcaaacatgagtctggatcttggattcatcactgtgttg
gcaaacagctcccataaagaagcccccggctgtgccctgagtcccgagcacggcacggtg
ctcaccgccttcagagtctcctgcagcgctcccggttcagccagccctggcgggcagctc
acctattgcttctatgtcacaccagattcccttctggattgtagcccagatcctgaactc
ttcccagtttatcttccacttggagaagaggaaaatgattttattttacatgtgaaaatt
attgttagcaacaactttggtgacacagttcaaacaaatgcttcagtgaaggttggacct
gcagatatgatagatgggaacctgaccctgcaggctgtggtatctgagaaggcaaacacc
atcctaaaagatgggaacagcagcatgagtctcttccagctgtacaagtcagtgacatct
gtccttaatcagcagatccaagaggaaagttttaacatgtctttaccgacagacacacga
aaagagactgctctgaagatgtcagaggtattgaaagaaatcacttacaggagtgaggag
ctgtctgtctcagcacaggtggaagccagcaacactctgaaacatgtcagtgcctccttg
ctcactgtaaacacagagcacagcagagatggtcaggagttaaaggaagcagccaactat
ttgtttaatgcaagctcagtgtcacaccagctcctgagaacagttgaaaatctccagagt
gcccttctgtttgggaaggcaccaggcgatgagccaacagtgctcacctctccctctgcc
acaatgtatatgcacagattgcaaacagaaaacatggatagcacatccattaacatctcc
agttccagctctgccagctttactctcccacctgcttcctctctcaatatttcaggagtt
gatggtgaaacagtggatataaggatggtgagctttgccatgaatccctttttctccagt
gacagcagttttgacatcagtggaacagtgggaggtctaagtctaactggtctggatggt
ttgatcataccagtcagcaacctcaaagagaacattgagatcatgttaccaaggctttca
gcaactgaggaagataagattctgttgaatctgggcaattatagcacttttcaagtcaat
gttacctcagaaaacacatctatagtgatccacctggaatctgaacatgacattccccta
atactttacttgggctatggttatcacccaaatgaaaccaactatgatatgaaaaatcat
ctgttctgtaagaaaacttctggaggtgagacaaacagctgggttctcagcccagaactc
atttttggagagggaacctactatttcatggttttacaagatatgggaatggattcaaca
gtctacaatgggctaaccataaatgccacttgctttgcatcccactgtgtgttttgggac
gagcaccagggaggctggaacagctatggatgtcgtgtaggaccaaaaacaaatcctagc
agcacacagtgcctctgcaaccatctgaccttctttgggagctccttctttgtcataccc
aatgccatagatgtcagcaaaaccgcacagctgtttggtacatttgtggacaatcctgtg
gtggtgacaactgtaggatgcatatttctgatatatgtgcttgtagttatttgggctcga
aggaaagacatccaggatgatgccaaagtgaaaatcacagtcctggaagacaatgacccc
tttgctcagtatcgttaccttgtgacagttttcacaggacaccgccgtggtgcagccaca
acctccaaggtgactctcaccctctatggactggatggagagagtgagccccatcatcta
aatgatcctgatacaccagtctttgaacgtggaggagtggatgttttcctgctctgtacc
ttcttccctcttggggaactgcagagtattagattgtggcatgataattcaggggacagt
ccgtcctggtatgtgaatcgagtattagtccatgacctggcatgggatcagaaatggtat
ttcctctgcaactcttggctagccattgatattggagaatgtgtcctagataaagtgttc
ccagtagcaacagaacaggacatgaagcagttcagcaatctgtttttcatgaagacctcc
aagggtttccaggatgggcacatctggtactcggtgttcagccgctcccctcgaagctcc
ttcacgcgagcccagcgcgtgtcttgctgcttctcactgctcctctgcaccatgctgacc
agcatcatgttctggggtgtgccaaaggatcctgctgagcagaaaatggatctgggtaag
atcgaattcacatggcaggaagtgatgattggctttgagagctccctcctcatgttcccc
atcaacctgctcattgtgcagatcttcaggaacgtacgaccccggccagcccagctgggc
agagagaagaagccgggaaagaatggccgagtgtccccaagcctgcctcccactccaggg
gccacccaggctgcctctctcactccggaggctgacataagaagaattgccaactcactc
tttaaagccctgaagactccatctctcacctcagcaccagacttcgaaaaattagctaat
atcaacacactcctgtcattggttgaggatgtcatctgtcagaacagagctgggcaaggg
ttttgtgatgagagcaagaaggatggccctataattgtcacattgggtgctatggatatc
caagaaaaaacaagaagtccaactccagagaagaggatttgtgaccagctgaaatacagt
ggttaccatcgctgcttgtggtcccatactccaaatttgtctagtgatgacaagaaaagt
tcttctcccagagggctgccctggtggtttgtgttcattgcttggttccttgtggcagcc
accagcagtgtgtctgggttcttcaccatgctctacggactccattatggcaaggagaac
tccatcaagtggctcatctccatggtcatctccttcttggaaagtcttttcatcacacag
cccttaaaggtgctgggatttgctgctttttttgctctggttctgaagaagatggaacat
gaggatgaagaaaacacagctattgatggacctttatctgcaccaggtgattcacaccct
ctcttcggggtccgaagggacagtaggagcaacatttaccggccacctcctgctgctgat
gtggagaaaatgaaaatcagccacatgaaggagcagaaagcatttgccctcatcagagaa
atcctggcctatctggggtttttatggatgctgttactggttgcctatgggcagagagac
cccaattcctactatttaaacaaacacattgaggacagctttacagatggattccatgat
gtctacagttaccaggattttttcacgtgggcaaacactactttactcaaaaatctttat
ggatcatataaaggattcattacagatggcaattccaagctggtgggtagtgctcgaatt
cgccaagtaagagtgaaaggagacacctgctctatttctcccagactccagcacgtagtt
gaggaatgccacgctccatactccctacaaacagaagatacatcagtttatggggagcac
tggaatacctcagcccctgataactcctctgacttgagctcagcatggcagtatcagagt
cagtccaaactgagaggataccccagctggggtaaatttgctgtctacagtggaggggga
tatgtgattcacctgggaactgaccctaaaaatgcctccagaattctccagtaccttttc
aacaatgtttggcttgacaccttcacaagagcagtgtttgttgaatttacagtctacaac
gccaacgtgaacctgttctgcattataagcctgatgtttgaaagcaatgctttaggggct
ttcttcacaagtgcagagctgcaaagtgtccggctgtacccctacaccgacagcctccac
atcttcgtggttgcagcagaaatcatttatttcctcttcattgtgtactacatgatagta
cagggaaagctgctgaagagtctgagatggagatacttccatagcaagtggaatctcctg
gagatggccattatattgattagctggagtgctctgtcagtgtttgtgaaacggacagtc
cttgggaccagggacatcagctactaccaggaacacaaggaggactccgtaagcttcagt
gaaacagcaagagctgatgcagttcttggctacctgattgcattcctggtgcttctctcc
acagtgaaactgtggcatctgctgaggctcaaccctaaactgaacatgatcacttcaaca
ctaaggagggcatggggtgatatctctgggttcatcactgttattgcaatcatgttcctt
gcctattccattgctgcaaacctgatatttggctggaagctctactcttacaaaaccctc
cttgattcagcagagaccatggtcagtcttcagctgggaatcttcaactatgaggaggtc
ttggactacaatccaattttaggctccttcttaattggatcctgcatagtttttatgaca
tttgtggtactgaatctgttcatttcggtgattctggttgcttttagtgaggagcagaag
cattaccaggcttcagaagaagaggagattgttgacctaatgctaatgaaactcttcagt
ttctttgggataaaatgcaaaaaggaagagaagccagtcactggtgaacaactggagcaa
cctgtcagcaagtga
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