Geospiza fortis (medium ground-finch): 102040615
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Entry
102040615 CDS
T03755
Symbol
ATG4C
Name
(RefSeq) autophagy related 4C cysteine peptidase
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04136
Autophagy - other
gfr04140
Autophagy - animal
gfr04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
102040615 (ATG4C)
04140 Autophagy - animal
102040615 (ATG4C)
04136 Autophagy - other
102040615 (ATG4C)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gfr01002
]
102040615 (ATG4C)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gfr04131
]
102040615 (ATG4C)
03029 Mitochondrial biogenesis [BR:
gfr03029
]
102040615 (ATG4C)
Peptidases and inhibitors [BR:
gfr01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
102040615 (ATG4C)
Membrane trafficking [BR:
gfr04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
102040615 (ATG4C)
Mitochondrial biogenesis [BR:
gfr03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
102040615 (ATG4C)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
102040615
NCBI-ProteinID:
XP_005423031
LinkDB
All DBs
Position
Un
AA seq
457 aa
AA seq
DB search
MEATGTDEVEKIKSKFMSAWHNMKYSWVLKTKTYFSRNSPVFLLGKCYHFKTEGEYRALH
SFQSSSAGISTEISGNVEEFRKDFISRIWLTYREEFPQIKGSALTTDCGWGCTLRTGQML
LAQGLMLHFLGRAWVWPEALAMDSCDSESWPSSTVRKLTASFEASLTAERDPRLLARPPA
RRDWDGTERRNELYHRKIISWFGDSPLAAFGLHQLIEYGKKSGKMAGDWYGPAVVAHILR
KAVEEARDPELQGVTVYVAQDCTVYSSDVIDRQCSFVDSGKAGTKAVIILVPVRLGGERT
NTDYLEFVKGILSLEYCVGIIGGRPKQSYYFAGFQDDSLIYMDPHYCQSFVDVSIKDFPL
ESFHCPSPKKMSFKKMDPSCTIGFYCRTVQDFEKASEEITKMLKSSSKEKYPLFTFVKGH
SRDYDFASSPLHEENYLFSEDEKKRLKRFSTEEFVLL
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggaggccacggggacagatgaagtagaaaagatcaaatcaaagtttatgtctgcatgg
cacaacatgaaatacagttgggtgttgaaaacaaaaacttacttcagtcggaactctcca
gtttttctgctgggaaaatgttaccacttcaaaactgagggtgagtacagagctcttcac
tcattccagtcttcctcagcaggaataagcaccgagatttcggggaacgttgaggagttc
cgcaaggatttcatttctaggatctggctgacctacagagaggagttccctcagatcaag
ggctctgctctcaccacagactgtggctggggctgcacgctcagaacggggcagatgctg
ctggctcaggggctgatgcttcatttccttgggagagcctgggtgtggccagaagcgctg
gccatggacagctgtgactcggagtcctggcccagcagcaccgtcaggaagctcacggcc
tccttcgaggcgtcgctcacggctgagagggaccccaggctgctggcccggccccccgcc
aggagggactgggatggcaccgagaggaggaacgagctttatcacaggaaaatcatctcc
tggtttggggactcccccctggcagcctttgggctgcaccagctgatagagtacgggaag
aaatccgggaagatggcgggggattggtacgggcctgccgtggtggcacacatcttgaga
aaagctgttgaagaagcaagagaccctgagctgcaaggagtaacagtctatgttgcccag
gattgtacagtctacagctcggatgttattgacaggcagtgctcctttgtggattctggg
aaagcaggcacaaaagctgtaattatattggttcctgtgagactcggtggagagagaaca
aacacagactacctggagtttgtaaagggaattttgagcctggagtactgtgttggcatc
attggtggcagacccaagcaatcctattactttgctgggttccaagatgacagtttgatt
tacatggatcctcattactgccaatcttttgtagatgtcagcataaaggatttccctctt
gagtcattccactgtccttctcccaaaaagatgtccttcaaaaaaatggacccgagctgc
acaataggattttactgtaggactgtgcaggactttgagaaggcttctgaagaaatcacc
aagatgctgaaatcttcatccaaggagaaatatcccctgtttacttttgtcaagggtcat
tctagagactatgactttgcttccagtccactccatgaagaaaattaccttttctctgag
gatgagaagaaaaggctgaagagatttagcacagaggagtttgtcttgctttaa
DBGET
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