Geospiza fortis (medium ground-finch): 102040625
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Entry
102040625 CDS
T03755
Symbol
MYB
Name
(RefSeq) MYB proto-oncogene, transcription factor
KO
K09420
transcriptional activator Myb
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gfr03000
]
102040625 (MYB)
Transcription factors [BR:
gfr03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
102040625 (MYB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cmyb_C
Myb_DNA-binding
Myb_DNA-bind_6
LMSTEN
Myb_DNA-bind_7
Myb_DNA-binding_7
SANT_DAMP1_like
DUF6581
Spore_III_AB
Motif
Other DBs
NCBI-GeneID:
102040625
NCBI-ProteinID:
XP_014164379
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All DBs
Position
Un
AA seq
740 aa
AA seq
DB search
MDAYLLVAVYGKLIFKMILGNCATKLPLAYGQRRSCLCVSLRKVNLLGTEPRLWQLERGS
FCSSTGGSSCQRGVRAEWDLPSGLAPSGYGVWGIESEWRGCRTAARIYSSDDDEEDVEVY
DHDYDGLLPKTGKRHLGKTRWTREEDEKLKKLVEQNGTEDWKVIANFLPNRTDVQCQHRW
QKVLNPELIKGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEV
KKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEGYLQES
SKACHSSAAAGFQKNNHLMAFAHNPSPPAQLPVASQPPLGSDYPYYHIPEPQNVPGQIPY
PVALHVNIVNVPQPAAAAIQRHYNDEDPEKEKRIKELELLLMSTENELKGQQALPTQNHT
SNYPGWHSTTIADSTRTSGDSAPVSCLGEHHHCTPSPPVDHGCLPEESASPARCMIVHQS
NILDNVKNLLEFAETLQLIDSFLNTSSTHENLNLENPALTSTPVCGHKMAVTSPFHRDQA
FKAQKENHVFRTPAIKRSILESSPRTPTPFKNALAAQEIKYGPLKMLPQTPTHLVEDLQD
VIKQESEESAIVAGLHESGPPLLKKIKQEVESPTDKAGNFFCSNHWEGENLNTQLFTPGS
AMEDVPNLLTSSILKMPVSEDDDSFHKTVAVPRNRPLASPLQHLNTTWEPASCGKIEDQM
ALPDQARKYMGTFPTRTLVM
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgtacctgctggttgccgtctacggaaaactcattttcaaaatgatacttgga
aactgtgccacaaaacttcctttggcatatgggcagcggcgcagctgtctctgtgtgtca
ctgagaaaagtgaatctgctggggacggagccgcgcttgtggcagctggagcgtgggagc
ttttgctcaagcacgggaggctccagctgccagcgaggggtgcgtgcggagtgggatctt
ccatcggggcttgctcccagtggttatggggtctggggaatagagagtgaatggcggggc
tgccggactgctgcgcgtatatatagtagtgatgatgatgaagaagatgttgaggtgtat
gatcacgactatgatggtctgcttcctaagacaggaaaacgccacttaggaaaaaccagg
tggacccgggaagaggatgagaagctgaagaagcttgtggagcagaatggcacagaagac
tggaaagtcattgccaatttccttcctaatcggacagatgttcagtgccagcaccgatgg
cagaaggtactaaacccagaacttatcaaaggtccctggactaaagaggaggatcaaagg
gtaatagagctcgtgcagaaatacggtccaaagcgctggtctgtcattgctaagcatttg
aagggaaggattggaaagcagtgcagggagaggtggcacaaccatttgaatccagaagtg
aagaaaacctcctggacagaagaggaagatagaattatttaccaggcacacaagaggctg
ggaaacagatgggcagagattgcaaagttgctgcctggacgaactgataatgctatcaag
aaccactggaactccaccatgcgccggaaggtcgagcaggagggctacctgcaggagtcc
tccaaagcctgccactcctcagcagctgctggctttcagaagaacaaccacctgatggcc
tttgctcacaacccatcgccacccgcccagctgccggtggccagccagcccccgctgggc
agtgactacccgtactaccacatccctgagcctcagaacgttcctggtcagatcccgtat
ccagtagcactgcatgtaaatattgtcaatgtacctcagccagctgctgcagctatccag
agacactataatgatgaagaccctgagaaagaaaagcgaataaaggaattagagttgcta
ctaatgtcgactgagaatgaactgaaagggcagcaggcattaccaacacagaaccacaca
tcaaactaccctggctggcacagcaccacaattgctgacagtaccaggaccagtggtgac
agtgcacctgtttcctgtttgggggagcatcaccactgtactccatctccaccagtggat
cacggttgcttacctgaggaaagtgcatcccctgcccggtgcatgattgttcaccagagc
aacatcctggacaatgttaagaatctcttagaatttgctgaaacactccagttaatagac
tccttcttaaacacctcatccactcacgaaaacttgaacctggagaaccctgcacttacc
tccacgccggtgtgtggccataagatggcagttacctccccgttccacagggaccaggct
ttcaaagctcagaaggaaaaccacgttttcaggactccagcaatcaagaggtcgatatta
gaaagctctccaagaacacccactccattcaaaaacgcacttgcagctcaggaaatcaaa
tacggtcctttgaagatgctgcctcaaactccaactcatcttgtagaagatctgcaggat
gttatcaagcaggagtcggaggaatctgcaatagtggctgggctacatgaaagtggaccc
cctttgctgaagaaaatcaaacaagaggtggagtccccaacagataaagctggaaatttt
ttttgctcaaatcattgggaaggagaaaacctgaacactcagctctttacacctgggtct
gctatggaagatgtgccaaatcttcttacgagttccattttaaagatgcctgtgtctgaa
gatgatgatagttttcacaaaacagttgcagtacctagaaacaggccactagctagtcct
ctacagcatctgaacaccacctgggagccggcgtcctgcgggaagatcgaggatcagatg
gctctgccagatcaggcgcgcaaatacatgggcaccttccccacccggactctggtgatg
tga
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