Geospiza fortis (medium ground-finch): 102040656
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Entry
102040656 CDS
T03755
Symbol
MYO5C
Name
(RefSeq) myosin VC
KO
K10357
myosin V
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
102040656 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gfr03019
]
102040656 (MYO5C)
04131 Membrane trafficking [BR:
gfr04131
]
102040656 (MYO5C)
03029 Mitochondrial biogenesis [BR:
gfr03029
]
102040656 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gfr04812
]
102040656 (MYO5C)
Messenger RNA biogenesis [BR:
gfr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
102040656 (MYO5C)
mRNA cycle factors
P-body specific factors
102040656 (MYO5C)
Membrane trafficking [BR:
gfr04131
]
Others
Actin-binding proteins
Myosins
102040656 (MYO5C)
Mitochondrial biogenesis [BR:
gfr03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
102040656 (MYO5C)
Cytoskeleton proteins [BR:
gfr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
102040656 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_22
AAA_16
Csm1_N
Motif
Other DBs
NCBI-GeneID:
102040656
NCBI-ProteinID:
XP_005419711
UniProt:
A0A6I9HFD7
LinkDB
All DBs
Position
Un
AA seq
1740 aa
AA seq
DB search
MCAAELGSKYNRVWIPDNEEVWQSAEITKNYKAGDSFLHVQLEDGTELSYPVDPAALPPL
RNPDILVGENDLTALSYLHEPAVLHNLKIRFVESKLIYTYSGIILVAINPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYTMRYFAT
VSKSSSNAHVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDRSYQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASAMQPEYEHLKLGSAEEFNYTRMGGSTVIEGVDDR
ANMVETQKTFALLGLKRDFQMDVFKMLAAILHLGNVEIAAVGDERSSISMEDKHLSIFCE
LLDLNCDKMARWLCHRKIVTTSETVVKPMTRAQAVNARDALAKKIYSHLFDFIVERINQA
LQFPGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPHGKDENWLQKLYNNFVNKNTLFEKPR
MSNTSFIIQHFADKVEYKCEGFLEKNRDTVHEVLIEILKESKFHLCTNFFQDSPVSISPF
SSTINVKSARPVLKSPNKQLRTTVGSKFRNSLSLLMVTLNATTPHYVRCIKPNDEKLPFE
FDSKRVAQQLRACGVLETIRISAQSYPSRWTYIEFFSRYSILMTQQELSINDKKQICKIV
LQRLIQDPNQYQFGRTKIFFRAGQVAYLEKLRSDRLRQACTLLQRRVRGWLQRRRFLALR
RAALTVQQYFRGQRTVRQAITARNLKETWAAIIIQKYCRGYLVRRLCQLIHVAAVTIQAY
TRGFLARKKYRKMREEQKAVVLQKYARAWLARRRFQNIRRFVLNIQLSYRVQQLQKRIEE
QSKENHGLLERLTNLASTHMNDVDTIQKLESELEKLTAQKRTYEEKGKKYKEDSEQKILK
LENQNKELQEQKETLEIKLQEKTEEMKEKMDDLTQQLFNDVQKEENQRMILEKNFQNQKQ
DYEKEIELLKGEIKILKEEKIQLQQQIQQEITTQDGLKMEVGQLTKQAQKIPELQKEIEL
LQTQKLDVEKQAHSQKRELREKMSEVTKQLLESYDFEDVRSRLSTEDLEHLNEDGELWFA
YEGLKKATRVLESHFQSQKEIYEKEIEGLNFKVEHLSQDINHLQKLFREENDINDGIRLE
VSRLTSENLVIPDLKQQVAELENQKLDLENRLQEQTIKLKGKMEEMSNRLHYELERDRTP
RRTTEAQNEVDIKEKESLKDTIQGIEGLSNGLMQDEIQGELQSKIKQVTTRLAEENMDLE
EKLDMKDRIIKKLEDQIKTLTKTIEKSEAHVPTVPKEYIGMMEYKKEDEERIIQNLILDL
KPRGVVVNMIPGLPAHILFMCVRYADYLNDADMLKSFMNVTIDGIKQVVKEHSEDFEMLS
FWLSNTYYFLNCLKQYSGEEEFMKHNTPRQNKNCLKHFDLSEYRQILSDLAIQIYHQFII
VMENNIQHMIVPGMLEYESLQGISGLKPTGFRKRSSSIDDTDTYTMTSILQQLSYFYSTM
CQNGLDSELLKQAVKQLFFLIGAVTLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKDKNL
QSSNAKETLEPLSQAAWLLQVKKITDDDAKEICEHCTSLSTVQIVKILNSYTPIDDFEKR
VTPSFVRKVQAMLNNREDVPQLMLDTKHLFQVTFPFTPSPHALELIQVPSSFKLGFLTRV
NT seq
5223 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcggcggagcttggctctaaatacaatagggtttggatccctgataatgaagaa
gtttggcagtctgcagaaatcacaaaaaactacaaagctggagacagctttctccatgtg
caattagaagatggaactgagctgagttaccctgttgatccagctgctttgccaccccta
cgaaatcctgacatacttgttggtgaaaatgatcttactgcactcagttacctgcatgaa
ccggctgttctacacaaccttaaaattcgttttgtggagtccaagcttatctacacatac
agtgggataattctggttgcaataaacccctataagcagctgccaatatatggagatgcc
attatccatgcatacagtgggcaaaacatgggggacatggatccacacatatttgctgtg
gcagaagaagcatacaagcaaatggcaagaaataacaaaaatcagtccattatagtcagt
ggagaatcaggagctggaaagactgtgtctgcaaggtacaccatgagatactttgccact
gtgagtaagtcaagcagcaatgctcatgtggaggataaagtactggcatccaatccaata
actgaggctgtgggcaatgcaaaaaccacacggaatgataacagcagtcggtttgggaaa
tacactgaaatcagttttgatcggagttaccaaatcattggagctaacatgagaacatac
ctgcttgagaaatccagagttgtatttcagtcagaaaatgaaaggaactaccatatattt
tatcagttgtgtgcatctgctatgcaacctgaatatgaacatcttaaattgggaagtgca
gaagaatttaactacacacgaatgggtggcagcactgtaatagaaggggttgatgacaga
gcaaatatggtggagactcagaagacatttgccttactgggtctgaagagggattttcag
atggatgtttttaaaatgctggcagcaatcctgcacttgggcaatgtggaaatagcagct
gttggagatgaaagatcatccatcagtatggaagataaacacctcagtatattctgtgag
cttctggatttaaactgtgacaaaatggcccgatggctgtgccacaggaagattgtcacc
acctccgagaccgtggtgaagcccatgacgagggcccaggctgtcaacgccagggatgcc
ctggcaaagaagatctactcccatttatttgacttcattgtggaaagaattaaccaagct
ctgcagttccctggcaagcagcacactttcattggtgttttggatatttatggatttgaa
acatttgatgtgaacagttttgaacaattttgtatcaattatgcgaatgaaaaactacag
cagcaatttaacctgcatgtctttaaactcgaacaagaagaatatatgaaggaagatatc
ccatggactttaatagacttttatgacaaccagcctgtcattgaccttattgaagctaaa
atgggaattttagaacttctggatgaagaatgcttgttgcctcatggaaaagatgaaaac
tggcttcaaaagctgtataataattttgtcaataaaaacacactctttgaaaagccaagg
atgtcaaacacttctttcatcattcaacactttgctgataaggtagaatataaatgtgaa
ggatttctggaaaaaaacagagatacagtacacgaagttttgattgaaatcttgaaagag
agcaagtttcatctgtgcacaaatttttttcaagacagtccagtgtccatctcacccttc
agttcaactataaacgtcaaatctgccagacctgttctgaaatcacccaacaaacagctc
cggaccactgtgggcagtaagttcaggaattctttgtctttgcttatggtgacgctcaat
gcaaccactcctcattatgtgagatgcataaagccaaatgatgagaaattgccttttgag
tttgattccaagagagttgctcagcagctgagagcatgtggtgttttggaaactattcgg
attagtgcacagagctacccatccaggtggacttacattgagtttttcagccgttacagc
attcttatgacacagcaggaactctccataaatgacaagaaacagatttgcaagattgtt
ttgcagaggctgatccaggatcctaaccaatatcagtttgggagaacaaagatatttttc
agagcggggcaggtggcttacctggagaagctgcgctcggacaggctgcggcaggcgtgc
acgctgctgcagcggcgcgtgcggggctggctgcagcgccggcgcttcctggccctgcgc
cgggccgcgctcaccgtgcagcagtacttccgtgggcagcgcaccgtcaggcaagctata
actgcaagaaatctgaaggaaacatgggcagcaataatcattcagaaatactgtcggggt
taccttgtccgtagactttgccagctcatccatgtggctgctgtgacaatccaagcttac
acgagaggatttctagcaagaaaaaagtatcgcaagatgcgtgaggagcagaaggctgtg
gtcctccagaagtacgcccgtgcgtggctggccaggcgcaggttccagaacattcggcgc
tttgtgttgaatatccagctctcatacagagttcagcagttgcagaaaaggatagaagaa
cagagtaaagaaaatcatggcttgctggaacgattgaccaatctggcttcaactcatatg
aatgacgtggatacaattcagaaacttgaatcggaactcgaaaaattaactgctcaaaag
agaacatatgaagagaaagggaaaaaatataaagaggacagtgagcagaaaatcttaaaa
cttgagaatcagaataaagaattacaagagcagaaggagaccttagaaataaaactccaa
gaaaaaactgaggaaatgaaagagaaaatggatgacctcacacagcaactcttcaatgat
gtacagaaagaagaaaaccagcgaatgatacttgagaaaaatttccaaaaccagaagcag
gactatgaaaaggagattgaactgctcaagggagaaattaagatcctgaaagaagaaaaa
attcagctacagcaacaaattcagcaagaaattaccactcaggacggcttgaaaatggaa
gtaggacagcttacaaaacaagcacagaaaatacccgagttgcaaaaggaaattgaactt
cttcagacacagaaactggatgttgaaaagcaggcccactcacagaaaagagaattgagg
gaaaagatgtcagaagttacaaagcagcttcttgaaagttatgattttgaagatgtaaga
agcagactctctacagaggatctggaacacttaaatgaggatggagaactgtggtttgct
tatgagggcttgaaaaaagccacaagagtattggaaagccatttccagtctcagaaagaa
atatatgagaaggagattgaaggtttgaactttaaagttgaacatcttagtcaagatatt
aatcatctacagaaattattccgagaggaaaatgacatcaacgatggcattcggctggaa
gttagcaggctgacttcagaaaatctggtaatcccagatcttaagcagcaagttgctgaa
cttgaaaatcaaaaattagaccttgaaaaccgtcttcaagagcagaccataaagttgaaa
ggaaaaatggaagagatgtcaaatcggctgcattatgagctggaacgggacaggacacca
agacgaactactgaggcccagaatgaagtagacataaaagaaaaagaaagtctgaaggac
acaatccaaggaattgaggggctgagcaatggtttgatgcaagatgaaatccagggtgaa
ctacaaagcaagataaagcaagtgacaactcgacttgctgaggaaaacatggatcttgaa
gaaaagctagacatgaaagacagaataataaaaaaattagaagatcagatcaaaactctg
accaagactattgaaaaatctgaagcccacgtgcccactgtgcccaaagagtacattgga
atgatggagtacaaaaaagaggacgaagaaaggatcattcaaaatcttatcctcgatttg
aagccccgtggagttgtagttaatatgattcctggcctcccagctcacatcctgttcatg
tgtgtgaggtatgcagattacctgaacgatgctgacatgctgaagtctttcatgaatgtc
accattgatggcatcaagcaggttgttaaggaacattcagaagactttgagatgttgtcc
ttttggctttccaacacatattattttcttaactgtttgaagcagtacagcggggaagag
gaattcatgaagcataacactccacgtcagaataagaactgtttgaagcattttgatctc
tcagaatacagacaaattctcagtgatttggccattcaaatatatcaccaattcattatt
gtaatggagaacaacattcaacacatgattgtaccaggcatgctggaatatgaaagtctt
caaggaatttctggcttgaaacctacggggttccgtaaacgttcttccagtatagatgac
acggatacctacaccatgacctctatattgcagcaactcagctatttttatagcactatg
tgtcagaatggcttggactctgagctcctaaagcaggcagtgaagcagcttttctttctg
attggagctgtcaccctcaatagtctcttcctccgcaaggacatgtgctcctgtaggaaa
ggaatgcagataagatgtaatatcagctacttggaagaatggcttaaggacaagaatctt
caaagcagcaatgccaaagaaacgttggagcccctgtctcaggcagcctggctccttcag
gttaaaaagatcacagatgatgatgccaaggaaatatgtgaacactgcacatctctttct
actgtgcagatagttaagatcctgaactcatacactccaatagatgactttgagaaaaga
gtgactccatcctttgttcggaaggtccaggctatgctaaacaaccgtgaggatgtccca
cagctgatgcttgataccaagcatctcttccaagtgacgtttcctttcaccccctctcca
catgctttggaactgatacaagtccccagcagcttcaaacttggctttctcacgagggtt
taa
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integrated database retrieval system
