Geospiza fortis (medium ground-finch): 102040664
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Entry
102040664 CDS
T03755
Symbol
SPTBN1
Name
(RefSeq) spectrin beta, non-erythrocytic 1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04517
IgSF CAM signaling
gfr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
102040664 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102040664 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gfr04812
]
102040664 (SPTBN1)
Cytoskeleton proteins [BR:
gfr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
102040664 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
102040664 (SPTBN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SCAR_helical
SOS1_NGEF_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
102040664
NCBI-ProteinID:
XP_005422698
UniProt:
A0A6I9HJ84
LinkDB
All DBs
Position
Un
AA seq
2273 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVAKELETENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQI
LSSDDYGKDLTSVVRLLSKHKAFEDEMSGRSGHFQQAIKEGEDMIAEEHFGSEKIRERIK
DIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEIASYRPTIDSLHEQAKALPQEHAESPDVQGRLSGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEKWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPGEKIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNYH
LECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAEK
LESEHPDQAQAILSRLAEINDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSRT
QTAIASEDMPNTLTEAEKLLTQHENIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFLR
QRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTTL
EGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDKIQEKVDSIDDRHRKNR
EAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFMA
ELASNKEWLEKIEKVGMLENQMDVRKKEIEELQSQARALSQEGKSTDEVDGKRLTVEKKF
LELLEPLNERKANLLASKEIHQFNRDVEDEILWVGERMPIATSTDHGHNLQTVQLLIKKN
QTLQKEIQGHQPRIDDIFERSQNIITESSPNAEVIQQRLADLKQLWNLLIEETEKRHKRL
EESHRAQQYYFDAAEAEAWMSEQELYMMSEEKAKDEQSAVSMLKKHQILEQAVEDYAETV
HQLSKTSRTLVADNHPESERISMRQSKVDKLYAGLKDLAEERRGKLDERHRLFQLNREVD
DLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDTVNHMADELINS
GHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHDAKEILGRIQDKHKKL
PEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAARLQAAYAGDKADDIQKRENE
VLEAWKALLDACEGRRVRLVDTGDKFRFFSMVRDLMLWMEDVIRQIEAQEKPRDVSSVEL
LMNNHQGIKAEIDARNDSFTTCIELGKSLLARKHYASEEIKEKLLQLTEKRKEMIDKWED
RWEWLRLILEVHQFSRDASVAEAWLLGQEPYLSSREIGQSVDEVEKLIKRHEAFEKSAAT
WDERFAALERLTTLELLEVRRQQEEEERKRQPPTPEPKVAEDGDSQQQWDGTKGEQVSQN
GLPSDQESPRVAESAETNEMVNGAAEQRTSSKESSPIPSPTSDRKAKSGVQAQTAATLPA
KTQEIPSAQMEGFLHRKHEWETHSKKASSRSWHNVYCVINNQEMGFYKDSKAAASGIPYH
NEIPVSLKDAVCEVAVDYKKKKHVFKLRLTDGNEYLFQAKDDEEMNTWIQAITSAISSDK
IEVSPTTQSTPASSRAQTLPASVTITSESSPGKREKDKEKDKEKRFSLFGKKK
NT seq
6822 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgacggtagcgacagattacgacaacattgagatccaacagcagtacagcgac
gtcaacaaccgctgggatgtggacgactgggacaatgagaacagctctgctcggctgttc
gagcgctcccgcatcaaggccctggctgatgaacgtgaggcagttcagaagaagaccttc
accaagtgggtgaattcccacttggctcgtgtgtcctgccggattacagacctgtacact
gaccttcgagatgggaggatgctcatcaagctcctggaagtgctttcaggagagagactt
cctaaaccaactaaaggaaggatgcgcatccattgcctggagaatgtggataaagccctc
cagttcctgaaggagcagcgagtgcacctggaaaacatggggtctcatgatattgtggat
gggaatcacaggctgacacttggccttatttggaccattatcctgagattccagatccaa
gatatcagcgttgaaactgaagacaacaaagagaagaaatctgctaaagatgctttgctt
ttgtggtgccagatgaaaacagctgggtaccccaatgtcaatatccacaactttacaacg
agctggagggatgggatggcgttcaatgcactgatccataagcacaggcctgatctgatt
gattttgacaagctgaagaaatcaaatgcacactacaatctgcagaatgcttttaacctt
gcagagcagcaccttggtcttaccaagctcctggaccctgaggatatcagtgttgatcac
cctgatgaaaagtcaatcatcacctatgtggtgacatattaccactacttctccaagatg
aaagctttggctgtcgaaggaaaacgtattggaaaggtgcttgacaatgccattgaaaca
gagaaaatgatagaaaaatacgagtccctggcttctgacctgctggagtggattgagcaa
accattatcatcctcaacaatcgcaaattcgccaactccctggttggggtgcagcagcag
ctgcaggcgttcaacacttaccgcacagtggagaaaccacccaaatttacagaaaaagga
aacttggaagtgctgctttttaccatccaaagcaaaatgagagccaacaatcagaaagtg
tacatgccaagggagggcaaactcatctctgacattaacaaggcctgggaaagactggaa
aaagctgaacatgaaagagaactggcactgcgaaatgagctcatcagacaagagaaactg
gaacaacttgcacggagattcgatcgcaaggcagctatgagagaaacttggctgagtgaa
aatcaacgtctcgtttctcaggacaattttggctttgacctcccagcagtggaggctgcc
acgaagaagcacgaggccatcgagacggacatcgcggcatacgaggagcgtgttcaggcc
gtggtggccgtggccaaggaactcgagactgaaaactaccacgacatcaaacgcatcact
gcaaggaaggacaatgttatccgcctgtgggagtatctcctggagctgctccgggcacgg
agacagcgcctggagatgaaccttgggctgcagaagattttccaggaaatgctgtacatt
atggactggatggacgagatgaaggtgcttttactgtcccaagactatggcaaacatttg
ttgggagttgaggacctgctgcagaagcacgctctggtggaagctgacattgctattcag
gctgagagagtgagaggggtcaatgcctctgctcagaagtttgccacggatggagaaggt
tacaagccctgtgacccgcaggtgatccgggaccgcgtggctcacatggagttctgctac
caggagctctgccagctcgcggccgagcgccgcgcgcgcctcgaggagtcccggcgcctc
tggaaattcttctgggaaatggctgaagaggagggctggatcagggagaaggagcagatc
ctgtcatctgatgactacgggaaggacctaaccagtgtcgtccgactcttgagtaaacac
aaggcgtttgaggatgagatgagcggccgcagcggccactttcagcaggcgataaaagaa
ggtgaagacatgatcgcggaagagcattttgggtctgagaagatcagagaaagaattaag
gatatccgggagcagtgggctaacctggagcagttatctgccattcggaagaagcggctg
gaggaagcctctctccttcaccagttccaggctgatgctgacgatattgatgcgtggatg
ttggacatcctcaagattgtctccagcaacgatgttggccatgatgaatattccacgcag
tccttggtcaagaagcacaaagatgtggctgaagagattgcgagctaccggccgaccatc
gactctcttcacgagcaggccaaggccctgccgcaggagcacgcggagtctccggatgtg
caaggcaggttgtccggaatcgaggagagatacaaagaggttgctgagctgacccggctg
cgtaaacaggccctgcaggataccctcgctctctataagatgttcagcgaggcagatgct
tgtgagctttggatcgacgaaaaggagaagtggctgaataatatgcagattccagagaag
ctggaggacctggaagtgatccagcacaggtttgaaagcttggagccagaaatgaacaac
caggcatcccgtgtggctgtggtgaaccagattgccaggcagctgatgcacagtggccac
cctggggagaagatcaaagcacagcaagataaactgaacacaaggtggagccagttcaga
gagctggtagataggaagaaggatgctctgctttctgctctgagtatccagaactaccat
cttgaatgtaatgaaaccaaatcctggatcagggaaaagaccaaagtgattgagtccaca
caagacctgggtaatgacctggctggagtgatggccttgcagaggaagctgacgggcatg
gaacgggacctggtggccatcgaagccaagctcagtgacctgcagaaggaggcagagaag
ctggaatcagagcatcctgaccaggcacaagccatcctttcacggcttgcagagatcaac
gacgtgtgggaagaaatgaagaccaccctgaagaaccgggaagagtccctgggagaggcc
agcaagctgcagcagttcctgagagatctggatgacttccagtcctggctctccagaaca
cagactgcaattgcctctgaagatatgcccaacaccctgacagaggctgagaagctgctc
actcagcacgagaatatcaagaatgaaatcaacaactacgaggaagattatcagaagatg
agggacatgggtgagatggtgacacaaggacaaactgacgctcagtacatgttcctacgc
cagcgcctgcaggctttggacaccggatggaatgagcttcacaaaatgtgggagaacagg
caaaatctcctttcccagtctcatgcctaccagctgttcctcagagataccaaacaagca
gaagctttccttaataaccaggagtatgttctggcacacacggagatgccaaccaccttg
gaaggagcagaagctgctattaaaaagcaggaggatttcatgactaccatggatgccaat
gaagaaaagatcaatgcagttgtggagacgggcaggaggctcgttagtgatgggaacatt
aactctgataaaatccaggagaaagtggactcaattgatgacagacataggaagaaccgt
gaagcagccagtgaacttttgatgagactgaaagataacagggatctccaaaagtttctt
caggattgccaagagctctccctctggatcaatgagaagatgctcacagcccaggatatg
tcctatgatgaggcaaggaacctgcacagcaagtggctgaagcatcaggcattcatggca
gagcttgcatccaacaaagagtggctggagaagattgaaaaggtagggatgctggagaat
caaatggatgtccgtaagaaggagatagaggaactgcaaagccaggcaagggctttgagc
caagagggcaagagcacagatgaagtcgatggcaaacgccttactgtagaaaagaaattc
ttggagctgctggagcctttgaatgagagaaaggccaacctgctggcctccaaagagatc
caccagttcaacagggatgtggaagatgaaattttgtgggtaggagagaggatgcccata
gctacatctactgatcatggacacaacctccagactgtgcagctactaataaagaaaaat
cagacccttcagaaagaaatccagggtcaccagcctcgtatcgatgacatttttgagagg
agtcagaacatcatcacagagagcagccccaatgctgaagtcatccagcagagacttgca
gacttgaagcagctgtggaacctcctcatcgaggagacggagaagcgccacaagcgcctg
gaggagtctcacagggctcagcaatattacttcgatgcagccgaggctgaggcctggatg
agtgagcaggagctctacatgatgtcagaagagaaagccaaggatgaacagagtgcagtg
tccatgctgaagaaacaccagattttggaacaagctgtagaagattatgctgaaactgtg
caccagctttcaaagaccagcagaactttggtggcagataatcacccagaaagcgagcgc
atcagcatgcgccagtccaaggtggacaagctctacgcgggcctgaaggacctggccgag
gagaggaggggcaagctggacgagaggcaccggctgttccagctcaaccgcgaggtggat
gacctggagcagtggattgccgagagggaggtggtggcagggtcccacgagctgggccag
gactacgaacacgtcacgatgctgcaggagcggttccgggagttcgcccgggacaccggg
aacatcgggcaggagcgggtggacaccgtcaaccacatggccgatgagctcatcaactcc
ggccactcggacgccgccaccatcgccgagtggaaggacggactcaacgaggcctgggcg
gatctcctggagctcatcgacacgagaacacaaatcctcgcagcctcttatgaactgcac
aaattttaccacgatgccaaggagatcttaggacgtatccaagacaaacataagaaactg
cccgaggagctcggtagagaccaaaacacagtggaaacactacagagaatgcacacgacg
tttgagcacgatatccaggccctgggcacgcaggtgcgacagctgcaggaggatgcagcg
cgcctccaggctgcctacgccggggacaaggctgatgacatccagaagagggaaaacgag
gtcctggaggcatggaaggcactgctggatgcctgtgagggccgcagggtgaggctggtg
gacacaggagacaaattccgcttcttcagcatggttcgggacctcatgctctggatggaa
gacgttatccggcagatagaagcccaggaaaagccaagggatgtctcatctgtggaactg
ctcatgaacaatcaccaggggatcaaagcagaaattgatgcccgaaatgacagcttcact
acgtgcattgagcttggcaagtctctgctggccaggaaacactatgcatctgaggagatc
aaggaaaagctcctgcagctgacagaaaagagaaaagaaatgattgacaaatgggaagac
agatgggagtggctgagactgattttggaggtgcaccagttctccagagatgcaagtgtg
gctgaggcctggctgctgggacaggagccctacctgtccagccgtgagatagggcagagc
gtggatgaggtggagaagttgatcaagcggcacgaagcgtttgagaaatccgcggctacc
tgggatgagaggtttgcagcgctggagagactgaccacgctggaactgctggaggtgcgt
cggcagcaagaggaggaggagcggaagaggcagccgcccactccagagcccaaggttgca
gaggatggagactcccagcagcaatgggatgggacaaaaggagaacaagtttcccaaaac
ggtttgccctcagaccaggaatctccacgggtggcagaaagtgcagaaaccaacgaaatg
gtcaatggagctgcagaacagaggacgagttccaaagagtccagtcccattccttccccc
acgtcagaccgcaaagccaagagcggcgttcaggcccagactgctgcaaccctcccggcc
aaaacgcaggagatcccctcggcccagatggagggcttcttacaccgcaagcacgagtgg
gagacacacagcaagaaagcctccagcaggtcatggcataacgtgtactgtgtcataaac
aaccaagagatgggcttctacaaggactcaaaagctgctgcttctggcatcccttaccac
aacgagatccccgtcagcttgaaggacgcagtctgcgaagtcgcggtcgattacaaaaag
aagaagcatgtgttcaagctcagattgaccgatggcaacgagtacctcttccaagccaaa
gacgatgaggagatgaacacgtggattcaggccatcacatcagcgatctcttcagacaaa
atcgaagtgtccccgaccacccagagcactccagcctccagccgtgcccagaccctgcct
gccagtgtcacaataaccagcgagtccagccctggcaagcgggagaaagacaaagagaaa
gacaaagagaaaagattcagcctttttggtaaaaagaagtga
DBGET
integrated database retrieval system
