Geospiza fortis (medium ground-finch): 102040686
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Entry
102040686 CDS
T03755
Symbol
RFC2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03030
DNA replication
gfr03410
Base excision repair
gfr03420
Nucleotide excision repair
gfr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102040686 (RFC2)
03410 Base excision repair
102040686 (RFC2)
03420 Nucleotide excision repair
102040686 (RFC2)
03430 Mismatch repair
102040686 (RFC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gfr03032
]
102040686 (RFC2)
03036 Chromosome and associated proteins [BR:
gfr03036
]
102040686 (RFC2)
03400 DNA repair and recombination proteins [BR:
gfr03400
]
102040686 (RFC2)
DNA replication proteins [BR:
gfr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
102040686 (RFC2)
DNA Replication Termination Factors
ELG1-RFC complex
102040686 (RFC2)
Chromosome and associated proteins [BR:
gfr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
102040686 (RFC2)
DNA repair and recombination proteins [BR:
gfr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
102040686 (RFC2)
Check point factors
HRAD17(Rad24)-RFC complex
102040686 (RFC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_14
AAA_16
RCF1-5-like_lid
Viral_helicase1
Mg_chelatase
AAA_24
AAA_11
AAA_assoc_2
nSTAND3
DNAX_ATPase_lid
AAA_19
MipZ
AAA_18
AAA_5
AAA_28
ABC_tran
AAA_30
AAA_25
AAA_23
RuvB_N
NTPase_1
MeaB
RNA_helicase
SLFN-g3_helicase
Rad17
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
102040686
NCBI-ProteinID:
XP_005429245
UniProt:
A0A6I9HSY7
LinkDB
All DBs
Position
Un
AA seq
310 aa
AA seq
DB search
MKLSEIVGNEDTVSRLEVFAKEGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLE
LNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKT
TRFALACNASDKIIEPIQSRCAVLRYTKLTDAQILARLLKIVEKEDVAYTDDGLEAIIFT
AQGDMRQALNNLQSTYSGFGFINSENVFKVCDEPHPLLVKEMIQHCINANIDEAYKILAH
LWRLGYSPEDVIGNIFRVCKTYQMPEYLKLEFIKEIGYTHMKIAEGVNSLLQMAGLLARL
CQKTAAPAAS
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgtccgaaatagttggaaatgaagatactgtgagcaggttggaggtctttgca
aaagaggggaatgtaccaaacattataattgctggccctccaggaacaggtaaaaccacc
agtatcctgtgtttggctcgtgctctgcttggtcctgcattaaaggatgctgttctggag
ctgaatgcctcaaatgacagaggtattgatgttgtaagaaacaaaatcaaaatgtttgcc
cagcagaaggtcacacttccaaaaggtcggcataagataatcatccttgatgaagcagac
agcatgacagatggagcacagcaagcattgagaagaacaatggagatttattccaaaaca
acacgttttgcactggcatgcaatgcctctgacaaaatcatagaacccattcagtctcgg
tgtgcagtgctgcgctacaccaagctgacagatgcacaaatacttgccaggctgctgaaa
attgttgagaaagaggatgtagcatatacagatgatggactagaagccattatcttcaca
gcccaaggtgatatgagacaggcattaaacaacttacagtccacatactctggatttggc
tttataaacagtgaaaatgtctttaaggtatgtgatgagcctcatcctctgctggtgaag
gaaatgatacaacactgcataaatgcaaatattgatgaagcatacaagattcttgcccac
ctgtggcgccttggatactctccagaagatgtcattggcaatatcttccgtgtgtgtaag
acctatcaaatgccagaatatctgaaactggaatttatcaaggaaattgggtacacccac
atgaagatagcagaaggtgtgaactccctgttacaaatggctgggctgctggcccggctg
tgccagaagactgcagcccctgcagccagctag
DBGET
integrated database retrieval system