Geospiza fortis (medium ground-finch): 102040703
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Entry
102040703 CDS
T03755
Symbol
RNF6
Name
(RefSeq) ring finger protein 6
KO
K22753
E3 ubiquitin-protein ligase RNF6 [EC:
2.3.2.27
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gfr04121
]
102040703 (RNF6)
Enzymes [BR:
gfr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102040703 (RNF6)
Ubiquitin system [BR:
gfr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102040703 (RNF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_11
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-HC5HC2H_2
zf-RING_4
zf-HC5HC2H
Prok-RING_4
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
102040703
NCBI-ProteinID:
XP_005417832
LinkDB
All DBs
Position
Un
AA seq
645 aa
AA seq
DB search
MDRSRHRAGNGNEQAPSRERSGEGERQRQLERLSREEAYYQFINELNEEDYRLMRDRNLL
GTPGEITAEELQQRLEGAKERLTSQSHLDNREGEGRTVGDSEVLGENSNGDSLLEWLNTF
RRTGNATRSGQSGNQTWRAVSRTNPNSGEFRFSLEININHDHNSFETSGEEYVDIDATRL
YVERRRQLVGASVAPRTRNMVAREANNEAARTRLLRRAMALRSEIVSHAVSGRLRSRTRE
LTGQTNSTTRNNSVAADEPREMPERGTSPGVRRGRARTNVRMNTNQRLEILRLRSTLSSR
SRSPLQRQGDAARSEERGQRQDRNAQQVNRSRRQTAQASPQPTEQARGNTQAPQLSTVAP
SLRTTSEEEQPGRPVAAARRHPTITLDLQVRRIRPGENRDRDSIASRTRSRVGMSENTVT
FESDSGGFRRTISRSERAGIRTYISTIRIPLRRISETGLGEPSSVALRSILRQIMTGFGE
LSSLMETESNSEVQRGSHHLGDAQNSSSSANSSDPSGVLSRNRHAVDGSRERNGQRGGSQ
RSGRNHENQDNRQSQDANNLVENGTLPKEQIDNLSTRNYGDVHTENEWSKTCSVCINEYA
TGNKLRQLPCTHEFHIHCIDRWLSENSTCPICRQPVLGSNATDNG
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggatcgctcccgacaccgtgcgggaaatggcaatgagcaggcgccttcccgggagcgc
agcggcgaaggtgagagacagcggcagctggagcgcctcagcagggaggaggcctattac
cagttcattaacgagctcaacgaggaggactacaggttaatgagggaccgaaacctgctt
ggcactcctggagaaataacagcagaagagttgcagcaacgtttggagggggctaaggag
cgtctgacatcgcagtctcatctggataacagagaaggtgaaggtagaactgttggagat
tctgaagttcttggggaaaactccaacggcgactctttgcttgaatggcttaacacattt
cgtcgcacaggaaacgccactcgcagtgggcagagtgggaaccaaacctggagagctgtg
agtcgaacgaatccaaacagtggggagtttcgctttagtctcgaaatcaatataaatcat
gatcataacagttttgaaacttctggtgaggagtatgttgatatagatgctaccagactg
tacgtagaaagaagacgtcagctagttggcgcttcagtagccccacggacaaggaacatg
gttgcaagagaggcaaacaacgaagctgcaaggaccaggcttttaagacgtgccatggca
ttaaggtcagaaatagtctctcatgcagtctcagggaggctcaggagtagaacgagggag
ctgacaggccagacaaatagtactacacgaaacaattccgtggctgctgatgaaccaaga
gaaatgccagaaagaggtacttctccaggggtcagaaggggtagagctagaactaatgtc
cggatgaatacaaaccaaagactagaaattttgcggctgaggtctaccctaagcagtcga
agccgctccccgctgcaaaggcaaggtgatgctgctcgttctgaggaacgtggtcagagg
caggatagaaatgcacagcaggtcaacagaagtaggagacaaacagctcaggcttctcca
cagcctaccgagcaagcaagaggtaacactcaggctccccagctttccactgtagcccca
tccttacgaacaacttcggaagaggaacaacctggtaggccagtagctgctgccagaagg
caccctacaattacactagatcttcaggtgagaagaattcgtcctggagaaaacagagac
cgggacagcatcgccagtagaactcgttctagagtaggaatgtcagaaaacacagttacc
tttgaaagtgacagtggggggtttcggcgcacgatatcccgctccgaacgtgcaggtatt
cggacctacattagcactatacggatacctctccgtcggatttcagaaactgggcttggg
gaaccttcatcagtggctcttcgatcaatccttagacagataatgacaggctttggagaa
ctgagttctttaatggaaactgaatctaattcagaagtgcaaagaggcagccatcactta
ggggatgcacagaatagctcaagttcagcgaacagcagtgatcccagtggggttttgtct
agaaatagacacgcagtagatggcagcagggaaagaaatggacagaggggtggtagtcaa
cgctctgggcgcaatcacgagaaccaagacaacaggcagtctcaagatgcaaacaaccta
gtggagaacggaacgctgcccaaagagcagattgacaatctttctacacggaactatggg
gatgttcacaccgaaaatgaatggagtaaaacgtgcagtgtttgcattaatgaatatgca
acagggaataagctaaggcagttaccttgtacgcatgagtttcatattcattgtattgat
cgctggctttctgaaaactccacctgcccaatttgtcggcagccagttctggggtctaat
gccacagataatggctag
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integrated database retrieval system
