Geospiza fortis (medium ground-finch): 102040750
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Entry
102040750 CDS
T03755
Symbol
LGI3
Name
(RefSeq) leucine rich repeat LGI family member 3
KO
K19999
leucine-rich repeat LGI family member 3
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gfr04131
]
102040750 (LGI3)
Membrane trafficking [BR:
gfr04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
102040750 (LGI3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_5
LRR_4
LRR_9
LRR_1
LRRCT
LRR_14
Motif
Other DBs
NCBI-GeneID:
102040750
NCBI-ProteinID:
XP_005430966
LinkDB
All DBs
Position
Un
AA seq
510 aa
AA seq
DB search
MPREQLPARLLLLLLAVAWLWLPAEGRRAPPPPPSPPSCSCTRDTAFCVDSKAVPKNLPP
EVISLTMVNAAFTEIREAAFAHIPSLQFLLLNSNKFTLIGDNAFAGLSHLQYLFIENNDI
QALSKATFRGLKSLTHLSLANNNLQTLPRDLFKPLDILSDLDLRGNSLACDCKIKWLVEW
LESTNTTVPAVFCSSPGQFEGQRIRDLALGDFQCITTDFVMHQVLPFQAVSAEPFTYASD
LYVALAQPSASSCSILKWDYVERKLRDFDRIPAHSAVHCKPIVAQEQLYVVVAQLFGGSY
IYRWDTAVDKFIKIQDIDSQKIRKPNDIEAFQIEGDWYFVIADSSKAGSTSLYRLNQNGF
YSHQALHAWHRDTDVEYVENDGKPRLIISSSSQAPVIYQWSRAQKQFVPQGEVGEMLDVQ
MVKHFRAKREQFLCLSRYIGDSKVVRWEGQRFVEVQTLPSRGSMVMQPFAVGQRQYLALG
SDFSLTHLLLAPSFKANTLASRPVVVDLSL
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgccgagggagcagctccccgctcgcctcctcctcctcctcctcgccgtggcctggctc
tggttgccggccgaggggcggcgggcccccccgcctcccccctcccccccgagctgctcc
tgcacccgggacacggctttttgcgtggactccaaggccgtgcccaaaaacctgccgccc
gaggtcatctcgctgaccatggtgaacgcggctttcacggagatccgggaggcggctttc
gcccacatcccctccctgcagttcctcctcctcaactccaacaagttcacgctgattggg
gacaacgccttcgccgggctctcgcacctgcagtacctgttcattgagaacaacgacatc
caggcgctctcaaaggccactttccgcgggctcaagtccctgacgcacctctccttggcc
aacaacaacctgcagactctgccacgggacctcttcaagccgctggacatcctgagtgac
ctggacctccgcggcaactcgctggcctgtgactgcaagatcaagtggctggtggaatgg
ctggagagcaccaacaccacggtccccgccgtcttctgcagcagccccgggcagttcgag
ggacagcggatccgggacctggcgctcggggacttccagtgcatcaccacggatttcgtg
atgcaccaggtcctgcccttccaggcggtgtcggccgagcccttcacctacgccagtgac
ctgtacgtggccctggcgcagcccagcgccagcagctgctccatcctcaagtgggactac
gtggagcgcaaactccgcgacttcgaccgcatccccgctcactcggcggtgcactgcaag
cccatcgtggcgcaggagcagctctacgtggtggtggcgcagctctttggtggctcctac
atctaccgctgggacacggccgtggacaagttcatcaagatccaggacatcgacagccag
aagatccgcaagcccaacgacattgaggccttccagatcgagggcgactggtacttcgtc
atcgccgacagctccaaggcgggctccaccagcctctaccgcctcaaccagaacggcttc
tactcccaccaagccctgcacgcctggcaccgcgacaccgacgtggagtacgtggagaac
gacggcaaaccccggctgatcatctccagcagctcccaggcgcccgtcatctaccagtgg
agccgggctcagaagcagttcgtgcctcagggcgaggtgggcgagatgctggacgtgcag
atggtcaaacacttcagggccaagcgggagcagttcctgtgcctcagccgctacatcggc
gactccaaggtggtgcgctgggaagggcagcgcttcgtggaggtgcagacgctgccgtcg
cgcggctccatggtgatgcagcccttcgccgtgggccagcggcagtacctggcgctgggc
agcgacttctccctcacccacctgctgctggcgcccagcttcaaggccaacacgctcgcg
tcccggcccgtggtggtggacctcagcctgtag
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