Geospiza fortis (medium ground-finch): 102040779
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Entry
102040779 CDS
T03755
Symbol
ABCA4
Name
(RefSeq) ATP binding cassette subfamily A member 4
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
102040779 (ABCA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gfr02000
]
102040779 (ABCA4)
Transporters [BR:
gfr02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
102040779 (ABCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
102040779
NCBI-ProteinID:
XP_005422189
UniProt:
A0A6I9HJQ8
LinkDB
All DBs
Position
Un
AA seq
2333 aa
AA seq
DB search
MNFFRQVRLLLWKNWILRKRQKLRFLVELLWPLSLFLALVWLRKANPLYRQHECHFPNKA
MPSAGTLPWLHGIFCNMNNPCFRSPTHGEAPGVVSNYKNSILARIYKDAQELLLETPEIH
DLGRIWDELIIMTQFMETMRTNPERIAGRGIRILDILKDGETLTSFLLENVGLTDFVVYQ
LINAQVRPEQFAYGVPSLTLKDIACSEVLLDRFIIFSSRRGLPSVHKAMCALSQDSLQRV
EDALYANVDFFKLFRLLPTVLDRNSPGADLKAWGRVLSNVSKAVQKLARKPSVQDLLRVL
QPFLQDGRPESLGHLVSSLSDLFCGYPEGGGSRVLSFNWYEDNNYKAFLGIDSTRKKSGY
LYDNTTTPFCNALIQNLESNPLTKIAWHAVKPLLMGKILFAPDSPSVREIVKNANFTFEE
LERLQLLTKAWEEVGPQLWYFFQNSLQINMIRDSLKHPTVRDFLNSQMGAEGFTAEQIIN
FLHNGSSRSREKGMLDFDWRNIFSTVDQVLRLLSRYLECLTLDKFEGYLDETQLTRQALY
LLEENKLWAAVVFPDLEPTASSLPPHVTYKIRMDIDTVEKTNKIKDRYWDPGPRADPVDD
LRYIWGGFAYLQDMIEHGIIKTQSSTEVPLGIYLQQMPYPCFVDDVFMITLNRAFPIFMV
LAWIYSVSMTVKSIVLEKEMRLKEAMKNRGITNGVIWCTWFLDSFSMMAVSTLLLTALIM
HGQVLHYSNPLLFFLFLLTFTTATIMQCFLFSTFFSKANLAAACSGVIYFTLYLPHIVCF
VWQDRLTANLKILASLLSQVAFGFGTEYLSRYEEQGLGLQWGNIRTSPLEGDEYSFLFSI
NMMIFDAFIYGVLSWYLDNVFPGDYGLPQPWYFPVLESYWLGSKSPEAEKTAAADEKNPE
SEGCVDQKTMEREKNGSNSNKSEEPEKTEEKSDSQGKKDGKNKQCKHKREKEPGEQGKPK
TDVQDKDEININAFFEPEPAGLIPGVCIQNLVKIFANRPKPAVDGINITFYEGQITAFLG
HNGAGKTTTMSILTGLFPPTSGTVLVGGLDIQTHMDSIRHRLGMCPQHNILFNHLTVAEH
ILFYSQLKGRSREEAEQELETMVEDMGLTHKRNEEAQNLSGGMQRKLSVAIAFVGEAKVV
VLDEPTSGVDPYSRRSIWDLLLKYRPGRTIILSTHHMDEADILGDRVAIISQGKLFCSGS
PVFLKNSFGSGFYLTLVRKMRTTKMGRAASFCSCGSQCSCSCSSCVHRGEEGAPELELDG
DLNELAEVIHHHIPEAKLIESIGQELIYLLPNKNFKQRSYASLFRELEETLDDLGLSSFG
VSDTPLEEVFLKVTAEADPEMQKTGDAQENGSALGKTPTENKAAEQAALKTSDTSRMPVG
KPGDQNEGKGSRQYKGLQLVQQHIKALLIKRFLHASRSHKDFLAQVVLPASFVLLSLVLT
VIIPPFGEYPALTLHPWIYGQQFTFFSNERPGNEQMVSLTHAFLNKPGFGIRCMKNQPLL
NYPCNNMPTAWSTPAVHPNLSSLLLSQEWSPENPSPSCKCSTHKKLTMLPECPAGAGGLP
PPQRVQRSTEVLQDMTHRNISDFLVKTYPTLIKGSLKSKYWVNEQRYGGISIGGRLPVLH
VSGDQIVNFLSDLGRMMNVTGGQASLAAAKEIPNFLKYMETEDNIKVWFNNKGWHAMVSF
LNVANNAILRANLRTGQDPEEHGITAINHPLNLTKEQLSEVTVLTTSVDAVVAICVIFAM
SFIPASFVLYLIQERVTKAKHLQFVSGVSPVTYWLTNFMWDIVNYALSAGMVVAIFVGFK
KKAYASPTNLPVLVALLLLYGWAIIPMMYPASSFFSIPSTAYVALSCINLFVGLNSSAIT
FILELFENNPSLLKFNKTLKNVLLVLPHFCLGRGLIDLAMNQAVTEVYARFGEEHISDPF
QWDFVGKNLVAMALQGVVFFFLNLFMQHRLFSTRWFAETAMSPIINEDEDVAEERKRIMN
GGNKTDILQLQELTKIYAGRRKPAVDRLCVGIRPGECFGLLGVNGAGKTTTFKMLTGDTD
VTSGDAIVAGSSILTHISDVHQNMGYCPQFDAIDDLLTGREHLYLYARLRGVPAEEIKRV
AEWGIQKLGLPMYADHLAGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQSRRLLW
DSIVGVLRDGRAVVLTSHSMEECEALCTRLAIMVQGTFKCLGTIQELKYKFGDGYIVTLK
IKAPKSGLPPDPAPAEKFIRINFPGSFQREKHYNMLQYQICSSSLAKIFRLIISNKENLH
IEEYSVSQTTLDQVFVNFAKQQMEDEEIPLHPRAAGASREARVSPALHQQAVA
NT seq
7002 nt
NT seq
+upstream
nt +downstream
nt
atgaacttctttaggcaagtcagacttctactctggaagaactggatccttcggaaaaga
caaaagcttcgttttctagtggagcttttatggcctctatcattgtttcttgcacttgtc
tggctgaggaaagctaatccattgtatcgccaacatgaatgtcacttcccaaacaaggca
atgccatcagcaggcacactgccatggttacatggcatcttctgcaacatgaacaatccc
tgtttccgcagcccaacccatggagaggctccaggtgtagtgtccaactacaaaaattcc
atccttgcaaggatatataaagatgctcaggagcttttactggaaacccctgaaatccat
gaccttggaagaatctgggacgaactgatcattatgactcagtttatggaaacaatgaga
actaatcccgaaagaattgcaggaagaggaatacgaattcttgacattttgaaagatggg
gagaccctcacttccttcttgctagaaaatgttggcctcacagattttgttgtttaccag
cttattaatgctcaagtgcgccctgaacagtttgcctacggtgtccctagcttgactctg
aaggacattgcttgcagtgaggtgctcctggaccgctttattatcttcagcagccgaaga
ggtctcccttctgtacacaaggccatgtgtgccctgtcccaggacagtctacaaagagta
gaagatgccttgtatgcaaatgttgatttctttaagctattccggctgcttcccactgtg
ttggacagaaactcaccaggtgctgatctgaaggcttgggggagggtgctgtctaatgtc
tccaaagcagtgcaaaagctggccaggaagccaagtgttcaggaccttttgagggttctg
caaccatttctacaagatggaaggccagaatccttaggccacttggtgagttccctgtca
gatcttttctgtggctacccagaaggaggtggatccagagtgctttccttcaactggtat
gaagataacaactacaaagctttcctggggattgactcaacaaggaagaaatctggttat
ctttatgataatacaaccacacccttttgtaatgcattgatccagaacttggaatcaaac
cctttaaccaaaatagcctggcatgctgtgaagcccctgctgatgggaaaaattctcttt
gctcctgattcaccttctgtacgggaaattgtaaaaaatgcaaacttcacttttgaggaa
cttgaacgcctccaattgttgaccaaagcttgggaggaagtaggacctcagctgtggtac
ttctttcaaaacagcctgcaaattaacatgatccgtgactctctgaagcaccctacagtg
agggacttcctgaacagccagatgggtgcagaaggcttcaccgcagagcaaatcatcaac
tttctgcacaatggctcttcaaggagccgggagaagggaatgctggactttgactggcgg
aacatcttcagcactgtagaccaagttctgcgtttgctcagtcggtatttggagtgtttg
accttggataaatttgaaggttatcttgatgaaactcagctgactcgtcaagccctttat
ctgctggaggaaaacaaattatgggctgctgtggtttttccagacttagaacctacagcc
agcagtctcccaccacatgtgacatacaagatccgaatggacatagacacagtggagaaa
acaaacaaaatcaaagacaggtactgggatcctggtccaagagctgatcctgttgatgac
ttacgttatatctggggaggctttgcatatctccaggacatgattgagcatgggattata
aagacccagagcagcactgaagtgccattgggaatttatctgcagcaaatgccatatcca
tgttttgtggatgatgtcttcatgatcaccttaaaccgcgcctttcccatcttcatggtg
ctggcttggatatattccgtctccatgactgtgaagagcatagtgctggagaaagaaatg
cgtctgaaagaggccatgaagaacaggggcataaccaacggcgtgatttggtgcacttgg
ttcctagacagcttttccatgatggctgtgagcacattgctcctcacagctctgattatg
catggacaagtgctacattatagcaatccacttctgttctttctattcctactgacattc
accacagccaccataatgcagtgtttcttgttcagcaccttcttctccaaagcaaatctg
gcagctgcctgcagtggagtcatctacttcaccttgtacctgccccacattgtctgcttt
gtctggcaagaccgtctgactgctaatctgaagatcctggcaagtttgctttctcaagta
gcttttggattcggtacagaatatttgtcacgctatgaagaacaaggtcttggcctccag
tggggtaacatcagaaccagtcccttggaaggagatgaatatagttttcttttttccatt
aacatgatgatttttgatgctttcatttatggagtactgtcttggtatctcgataacgtt
tttccaggggactatgggctaccacagccttggtatttccctgtgctggaatcctattgg
cttggctccaaaagcccagaagctgagaaaacagcagctgctgatgaaaaaaatccagag
tcagaaggttgtgtggatcagaagaccatggaaagggaaaaaaatggaagcaactcaaat
aaatctgaagaacctgaaaaaacagaagaaaagagtgacagccaggggaagaaggatggt
aaaaacaaacaatgtaaacacaaacgagaaaaagaacccggcgagcaggggaagcctaag
acagatgtccaggacaaagatgaaattaatataaatgccttctttgagcctgagccagca
ggattgattccaggagtgtgcattcagaacctggtgaagatttttgcgaacaggcccaaa
ccagcagtagatgggataaatattactttttatgagggtcagatcacagccttccttggt
cacaatggagcaggaaagacaactaccatgtcgatactgacaggcctcttccctcccaca
tctggaactgtgctggttggcggcctggacatacagactcacatggactccattcggcac
agattagggatgtgccctcagcacaacatcctattcaaccaccttactgtagctgagcac
atcttgttttattctcaactgaaaggaagatccagggaagaagctgagcaagagctggaa
acaatggtggaagacatgggcctcacccataaaagaaatgaagaagctcagaatttgtca
ggtggaatgcaaaggaaactatctgttgccattgcttttgtgggtgaagcaaaagtggta
gtcttggatgagcccacttctggagttgatccatattccaggcgctctatctgggatctt
ctgctgaaatatcgcccaggcagaactattatcctgtcaacccatcatatggatgaggca
gacatccttggagacagagtagccatcatatcccaagggaaactcttctgctcaggctct
cctgtattcctaaagaactcttttggctctggcttttatctcactcttgttcgtaaaatg
agaaccacgaaaatggggagggctgcatcgttttgtagctgtggatctcagtgctcctgc
tcctgctccagctgtgtgcacaggggtgaagaaggagctccagagctggaactggatgga
gatctaaatgagctagcagaagtaatccaccatcatatcccagaagcaaaattaattgaa
agcattggtcaggagctcatttatcttttgcccaataaaaattttaaacaacgatcttat
gccagtctcttcagagaactggaagaaacattggatgacctgggactcagcagctttgga
gtttcagacacaccacttgaagaggttttcctaaaggtcacagcagaagctgaccctgaa
atgcaaaaaacaggagatgctcaagaaaatggttctgctcttggcaaaactcctactgag
aacaaagcagctgaacaagcggccctgaaaaccagtgacacttctcgaatgccagtaggc
aaaccaggagatcaaaatgaaggcaaggggtcccgacaatataaaggcttacagcttgta
cagcagcacatcaaagcactgctcatcaaacgcttcctccacgcctcccgcagccacaag
gacttcctagcacaggttgttctccctgctagttttgtgttgctgtctctagtacttaca
gtcattattcctccatttggagaatatcccgccttaacattacacccttggatctatgga
caacagtttactttcttcagcaatgaacgtcctggcaatgagcagatggtctcccttact
catgctttcttgaataaaccaggatttggaattcgctgtatgaagaatcagcctcttttg
aactacccatgcaataacatgccaactgcctggagcacacctgctgtccatcctaaccta
agcagcctcctgctgagccaagagtggagccctgaaaatccatcaccttcctgcaagtgc
agcactcacaagaaactcactatgctgccagaatgccctgcaggtgcaggaggcctccca
ccaccacagagagtgcaacgcagcacagaagttcttcaagatatgacccacagaaatatt
tcagattttctggtgaaaacatatcccactttgataaaaggaagcttgaagagtaaatac
tgggtcaatgagcagagatatggaggaatctctataggaggaaggcttccagtccttcat
gtttctggagatcaaattgtcaattttttaagtgatcttggccgaatgatgaatgtgaca
ggaggacaagcttcactggctgctgctaaagaaatccctaatttccttaaatacatggaa
actgaagataatattaaggtgtggtttaacaataaaggctggcatgctatggttagtttc
ctcaatgtagccaataatgcaatcctcagagctaatctgagaactggccaagaccctgag
gaacatggaatcactgctataaaccatcctctgaacctcaccaaggaacaactctctgaa
gtcactgtactgaccacttcagtggatgctgttgttgccatctgtgtcatttttgccatg
tcctttataccagccagttttgttttatacctgatccaagaacgcgtaacaaaagccaaa
catctccagtttgtcagtggtgtgagccctgttacctactggctaactaacttcatgtgg
gacatagtgaattatgcactgagtgctgggatggttgtggctatatttgttggattcaag
aagaaagcatatgcctccccgaccaatctccctgtgctcgttgccttgctgctcctctat
ggatgggcaataattcccatgatgtaccctgcttcttctttcttcagtatccccagcact
gcttatgttgcattgtcttgcattaatctctttgtgggactcaacagcagtgccattaca
tttatcctggaattatttgaaaataatccatctttgctgaagtttaataaaacattgaaa
aatgtactacttgtcctcccacatttttgtttgggccgtggactcatcgacttggccatg
aaccaagctgtgactgaagtatatgcaaggtttggtgaggagcatatttctgatcccttt
cagtgggactttgttggaaagaacctggttgccatggctcttcaaggagttgtgtttttc
tttctgaacctctttatgcagcaccgtttgttctccacaagatggtttgctgagactgcc
atgtcacctattattaatgaagatgaggatgttgcagaagaaagaaaaagaattatgaat
ggaggaaacaaaacagatatcttacaattacaagaactgacgaagatttatgcaggtcga
cgcaagcctgcagtggacagactctgtgttggcatccgccccggagagtgctttggcctt
ttgggagtgaatggtgctggcaaaacaacaacattcaaaatgctgactggagatactgat
gtgacatctggagatgctatagtggctggcagtagtatattgacccacatttctgatgtc
catcaaaacatgggatactgccctcagtttgatgccattgatgacctgctcacaggacga
gaacacctgtatttatatgcacgcctgcggggggttccagcagaagaaatcaagagggtt
gctgaatggggcatccagaagctgggactccctatgtacgcagaccacctggcagggacc
tacagtggtggcaacaagcgcaagctctccactgccattgccctcataggctgcccacca
ctcgtcttgctagatgaaccaactacggggatggaccctcagtcccggcgcctcctgtgg
gactctattgttggtgtgctcagagatgggcgagcggtggtgctaacctcacacagtatg
gaagaatgtgaagctctctgtactcgtttagccatcatggtacaaggtaccttcaaatgc
ctaggcacaattcaggagctaaaatacaagttcggagatggctacattgtcactctgaaa
atcaaagctccaaagtctgggctgcctccagatcctgctcctgctgagaaattcatacgc
atcaacttcccagggagtttccagagagagaaacactacaacatgctgcagtatcagatt
tgctcttcctctctggctaagatttttcgattaataatctccaataaggaaaatttgcat
attgaagaatattctgtgtctcaaacaacattagatcaggtttttgtgaactttgctaaa
cagcagatggaggatgaggaaattcctttgcatccacgtgcagctggagccagccgagaa
gccagggtgtccccagctctgcatcagcaggcagttgcatag
DBGET
integrated database retrieval system
