Geospiza fortis (medium ground-finch): 102040820 Help Entry 102040820         CDS       T03755                                  Symbol TDP1 Name (RefSeq) tyrosyl-DNA phosphodiesterase 1   KO K10862   tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-] Organism gfr  Geospiza fortis (medium ground-finch) Pathway gfr03410   Base excision repair Brite KEGG Orthology (KO) [BR:gfr00001]  09120 Genetic Information Processing   09124 Replication and repair    03410 Base excision repair     102040820 (TDP1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:gfr03400]     102040820 (TDP1) DNA repair and recombination proteins [BR:gfr03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Other BER factors      102040820 (TDP1) SSDB OrthologParalogGFIT Motif Pfam:  Tyr-DNA_phospho HGL2_C Motif Other DBs NCBI-GeneID:  102040820 NCBI-ProteinID:  XP_005417487 LinkDB All DBs Position Un AA seq 609 aa AA seqDB search MCRNMLQEGAHGKWTVSSSDESAEENSDSEKPCTSSLSDAACGRSSEPQYPCSEARKAAH KRKASPVKFTDTSVSAEAPPAVKQRPSQEGSGWCLSSSDEEPEDQQKHVHKETVKEEKHD VSKEHPLNLCKDDKLSENLKEEEYNVTPSEAQDIWDLVTGGNPFRFFLTKVSGIERSYNS GALHIKDILSPLFGTLISSAQFNYCIDVGWLVRQYPQEFRKKPLLIVHGERRESKAELIA QARPYENISFCQAKLDIAFGTHHTKMMLLLYEEGLRVVIHTSNLIADDWHQKTQGIWLSP LYPRLPKGASGGESATNFKSDLISYLAAYNSPALKEWIDLIQEHDLSETRVFLLGSTPGR YQGSDKEKWGHLRLRKLLKEHAVSIPAQESWPLVGQFSSIGSLGADGSKWLCSEFQESLV AAGSSVTTFRKCDVPIHLVYPTVNNVRQSLEGYPAGGSLPYSIQTAQKQLWLHSYFHKWS AEVTGRTHAIPHIKTYMRLSPDFQKIAWFLVTSANLSKAAWGALEKNGSQLMIRSYELGV LFLPSAFGLDKGYFHVGREKLPERKDSATYFPVPYDLPPEQYGSKDQPWIWNIPYTDAPD THGNMWVPS NT seq 1830 nt NT seq  +upstreamnt  +downstreamnt atgtgcaggaacatgcttcaggagggcgcacacggtaaatggacagtatctagcagtgat gaaagtgctgaggaaaattcggacagtgaaaaaccatgtacatcttcgctatcggatgct gcgtgtggtagaagtagtgagccacaatatccatgctctgaagctaggaaagctgctcac aagagaaaagcttcccccgtgaagttcactgatacaagtgtttctgcagaagcaccgcca gcagtaaaacagagaccaagccaagaaggctcaggttggtgtctttctagtagtgatgaa gagcctgaagatcagcaaaagcatgtccacaaagaaacagtgaaagaagagaaacacgat gtgtctaaagagcatcctttgaatctttgcaaagatgacaaactctcagagaatctgaaa gaagaggagtataatgtgacacccagtgaagcccaagatatctgggatttggtgactgga ggcaatcctttcaggttttttctcacaaaagtcagtggaattgaacggagctataattct ggagccctgcacataaaagatattttgtctcctctttttggaactctcatatcttctgcc cagtttaactactgtatagatgtgggatggcttgtaagacagtacccgcaggaattcagg aagaagccattgctgatagttcatggtgagaggagagaatccaaagctgaactaattgca caagcacggccttatgagaatattagcttttgtcaggctaaactggatattgcttttgga actcaccatacgaaaatgatgttgttgctgtatgaagaaggtcttcgagttgtgatacat acatccaatcttattgctgatgattggcaccagaaaactcagggaatatggttaagccct ttatatccaagactacctaagggagcatctggtggtgaatctgcaactaattttaaatct gacctaataagttacttggcagcttacaattctcctgcactcaaggaatggatagatctg attcaagaacatgatttatcagaaacaagagtgtttctgcttggttctacccctggacgt tatcaaggcagtgataaagaaaaatggggccatcttaggctcagaaagcttctgaaggag cacgctgtgtcaataccagcacaggaatcctggcctcttgttggacagttctcaagcatt ggttcactgggagctgatgggtccaagtggctgtgctcagagttccaggagagcctggtg gctgcaggcagcagtgtgacaactttccgtaaatgtgatgtcccaattcatctggtttat cctactgtgaacaatgtgaggcaaagtctagaaggctatcctgctggtggctcacttccg tacagtatacagacagcacagaaacagctgtggttgcattcctattttcacaaatggtca gcagaagtcacgggtcgaactcatgccatacctcacattaagacttacatgagactctct cctgacttccagaagattgcttggttcttggtaacaagtgccaatctatctaaagcagcc tggggagctctggagaaaaatggcagccaactgatgatccgttcttatgaacttggagtt cttttcctgccttcagcatttggattggacaagggttactttcatgtaggaagggaaaag cttccagaaaggaaagattcagcaacatattttcctgtaccttatgacctcccaccagaa cagtatggaagcaaagatcaaccgtggatttggaatattccttacactgatgcccctgat acacatggaaatatgtgggttccatcataa

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