Geospiza fortis (medium ground-finch): 102040862
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Entry
102040862 CDS
T03755
Symbol
HMBOX1
Name
(RefSeq) homeobox containing 1
KO
K24885
homeobox-containing protein 1
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gfr03000
]
102040862 (HMBOX1)
Transcription factors [BR:
gfr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
102040862 (HMBOX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
DUF494
HTH_24
CUT
HTH_37
HTH_26
HTH_31
HTH_23
Motif
Other DBs
NCBI-GeneID:
102040862
NCBI-ProteinID:
XP_005429837
UniProt:
A0A6I9HUS9
LinkDB
All DBs
Position
Un
AA seq
455 aa
AA seq
DB search
MLRTFPVVLLETMSHYTDEPRFTIEQIDLLQRLRRTGMTRHEILHALETLDRLDQEHSDK
FGRRSGYGGGSYGNSTNNVPASSSTATASTQTQHSGMSPSPSNSYDTSPQPCTTNQNGRE
SNERLSAFNGKMSPTRYPLANSLAQRSYSFEASEEDLDIDDKVEELMRRDSSVIKEEIKA
FLANRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTNPGATLSMR
PAPIPIEEPEWRQTPPPVTATSGTFRLRRGSRFTWRKECLAVMESYFNENQYPDEAKREE
IANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIEAAILESHGIDVQSPG
GHSNSDDVDGNDYSEQDTWQVRNGEEEGRCSEGGREAEKVEEDRRICSKQDDSTSHSDHQ
DPISLAVEMAAVNHTILALARQGANEIKTEALDDD
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgctcagaacttttccagtagtcctgctggaaaccatgtctcactacacagacgagcca
agattcaccatagagcagatcgacctcctgcagcgcctgagacgcacgggaatgaccagg
catgagatcctgcacgccctggaaaccttggaccgtctggaccaagagcacagcgacaaa
ttcgggagaagatccggctacggaggcggctcctacggcaacagcaccaacaacgtgccg
gcgtcgtcctcgacggccacggcttccacacagacgcagcactccgggatgtccccgtcc
ccgagcaacagttacgacacctccccacagccttgcactacgaatcagaacgggagggag
agtaacgagaggttgtctgccttcaatgggaagatgtcgcccacccgctaccccctggcc
aacagcctggcccagaggtcctacagcttcgaggcttccgaggaggatttggacatcgac
gacaaagtggaggagctgatgaggagggacagcagtgtgataaaggaagaaatcaaagcc
ttcctcgccaaccggagaatttcccaagcagttgttgcacaggtaacagggatcagtcag
agccggatctcccattggctgttgcagcaggggtcggacctgagtgaacagaagaaaagg
gcattttacagatggtaccagcttgagaagacaaatcctggggctacactaagcatgaga
cccgctcccatcccaatagaagagccagaatggagacagacgcctcccccagtcacagct
acctctgggaccttcagactacggcgaggcagtcggttcacgtggagaaaggagtgcctg
gctgttatggagagttacttcaatgagaaccaatatcccgacgaggcaaagagagaagaa
attgccaacgcctgtaatgcagttatacaaaaaccaggaaaaaagttgtcggatttggag
cgagttacctccctcaaagtgtacaactggtttgccaacaggaggaaggagatcaagaga
agagccaatattgaagcagcaatcctggagagccatggaatagatgtacagagtccagga
ggtcactccaacagcgacgacgtggacggcaacgactactcagagcaggacacttggcaa
gtacgcaacggggaggaggagggacgatgttccgagggaggcagagaagcagagaaggta
gaagaagacaggaggatctgctccaaacaagatgacagcactagccatagtgaccaccaa
gaccccatttccttagcagtggagatggcagcagtcaaccacaccatcctggcgctggcc
cggcaaggagccaacgagatcaagacagaggctctggacgacgactga
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