Geospiza fortis (medium ground-finch): 102040931
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Entry
102040931 CDS
T03755
Symbol
DSG4
Name
(RefSeq) desmoglein 4
KO
K07599
desmoglein 4
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
102040931 (DSG4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gfr04515
]
102040931 (DSG4)
Cell adhesion molecules [BR:
gfr04515
]
Cadherins
Major cadherins
102040931 (DSG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
CADH_Y-type_LIR
Cadherin_CELSR2_9th
RET_CLD1
Motif
Other DBs
NCBI-GeneID:
102040931
NCBI-ProteinID:
XP_005418426
LinkDB
All DBs
Position
Un
AA seq
1169 aa
AA seq
DB search
MDWLPHRTAAFLFLLLVILDFSTGFHVEVKEWNENGTARWKTFRRQKREWIKFAAACREG
EDNSKRNPIARIRSDCEEDNPITYSISGVGIDRAPYGIFVVNPRTGEINITSIVDREITP
VFVIRCFAKHSVTGIDLEPPLELRVRVLDINDNPPVFAQTVFTGSVEESSMDNTLVMKII
ATDADEPNHLNSKIAFKIESQEPSGPPMFIMNKYTGELHLANYLDREQHSSYTLVVKASD
RDGAADGISSLCSCNVKVIDVNDNFPTLAQSSFSASISENSLSSELIRIQALDADEEFTD
NWLAEFFFISGNEDNCFEIVTDRATNQGILRVIKELDFEHMRTHSLMIGVRNVAAFHHSV
AHEYQIFGTPLTVEVKNLIEPPRFHPSSVVFSLPEGARVNYVVGTYTAMDEDTRTVASNI
VYSIGRDPAAWFRINQNTGEITLNKVISRDSVYLVNGQYQAEVLAITRGVPRYTATGTVV
LSLDGINANCPTINTEVRKVCMHSPSVVISAKPRDGVVYATPFTFSIHGEPQTTWIIRRI
NDSSAELVGQNIDFYLYRIYVVVRDSQGRRCARPHIIPVQACQCDSRNYCTSGATRIIII
GGGGGGSGGGTGGGGTTGGGGGGTGGGDREDGGQQGGGDYGPEGGYVDHTEWQGYTDGYE
GGEEGYTASTDEGYNGNENAGRQLESNTTLSGAAIGLMFLGGLIFVLIPILMSMSDCCGC
GPGAAGGVGTGFEPVPECTEGAIHPWGIEGAQPEDRDVSHILAPTTAAGGDFCEPSDIYN
NTYGGGGVVASGVEETTGVGYGTGTGYGTAGGISGTGEAKGSIGGTIKEYREGGVNMAFL
DNYFSEKAYVYADEDEGRPANDCLLIYDHEGVGTPVGSVGCCSFIGEDTDETYLDTLGPK
FKTLAEICLGKEIEPFPDANPPWPGVNIPFPSPESDLNLPPPGTTIIVNGSAPMPPAAGT
TTVVTENTYTSGTTIQPPRPMPDPLLHGNMTVTETYTSSQPTVCVDPLRASNVVVTERVV
GPASASDLRGMLDIPDLTEGSNVIVTERVIAPNSRLPASLSIPDLVDGSNVVVTERVFRP
ASGMPGSLINIPSELSSAHNVVVTERVVSGAGMSSLGATSMGGANLGSLSSTGQMLSAEC
HLGQGMGTASPGTSRRRVTKYSTMQYSGQ
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atggattggctccctcaccgaacggctgcttttctgttccttttgttggtaatcttggat
ttcagcacaggatttcatgtagaggtaaaagaatggaatgaaaatggaacggcaagatgg
aaaacctttagaagacaaaaacgtgaatggattaaatttgctgcagcttgtagagaagga
gaagacaattccaagaggaatccaattgccagaatccggtctgattgtgaagaagacaat
ccaatcacatacagcatctctggagttggaattgatcgtgcaccgtatggaatatttgtt
gttaacccaagaacaggagaaattaatataacatcaatagtggatagggaaataacacca
gtatttgttatacgttgctttgctaaacactcagtgaccggtatagatttggaaccacct
cttgaacttcgagtcagagtcctggatataaatgataaccctcctgtatttgcacaaact
gtattcacaggatctgttgaagagagcagcatggacaacacactggtgatgaaaatcatt
gcaacagatgcagatgaacctaaccacttgaattctaaaattgccttcaaaatagagagt
caggaaccttctggtccacccatgttcattatgaataaatacacaggagaactccatctt
gcaaattatcttgacagagagcaacatagtagctacactctggttgtgaaggcatcagac
cgggacggggctgcagatggaatatcatccctttgtagctgtaacgtgaaagttattgat
gttaatgacaactttccaactcttgctcaaagctctttttcagcaagtatttcagaaaat
tcactcagttcagaactgatacgaatacaagctctggatgctgatgaagagtttacagac
aattggttagcagagtttttctttatatccggtaatgaagataactgttttgaaattgtt
acagatcgagctacaaatcaaggaatccttagagtaattaaggagctggattttgaacat
atgcgaactcactcactgatgatcggcgtcaggaatgtagctgcattccaccactctgtt
gcacatgagtaccagatatttgggacacccctcacagtagaagtaaaaaatttgattgaa
ccaccaagatttcacccatcttcagttgtgttttccctgcctgaaggcgcaagagtgaat
tatgttgtaggaacatatacagccatggatgaggacactagaaccgttgcatcaaatatt
gtatatagtataggacgtgatccagcggcctggttcagaatcaatcaaaacactggtgaa
atcacactgaacaaagttattagccgagattctgtctatctagtcaacgggcagtaccaa
gctgaggttctggctatcaccagaggggttcctcgatacactgctactggcaccgttgtg
ctttcactagatggcatcaatgccaattgcccaactattaatactgaagtgaggaaagta
tgtatgcattccccatcagtggttatctcagcaaagcctagggatggtgttgtctatgct
acccccttcacattcagcatacatggtgaacctcagactacatggattatcagacgaata
aatgattcctctgcggaattagtgggccagaacatagacttttacctttataggatctat
gtcgttgtaagggatagccaaggccggcgctgtgctcgaccacacataattcctgtgcaa
gcttgccagtgtgatagtcggaactactgcaccagcggggccacaagaataattatcatc
ggtggtggtggtggtggctctggtggtggcactggtggtggtggtactactggtggtggt
ggcggcggcactggtggaggagaccgggaagatggaggacagcaaggtggtggtgattat
ggacctgaaggaggatatgtggaccacacagagtggcagggttacactgatggctacgaa
ggaggtgaggaaggatatactgcctccactgatgaaggttacaatggaaatgaaaatgct
ggcaggcaattagaatcaaataccacacttagtggtgctgccattggcctgatgttcctc
ggcggattaatatttgttttgattccaattttgatgtcaatgagcgactgttgtggctgt
ggacctggtgctgcaggtggagttggaactggatttgaacccgtacctgaatgtacagaa
ggggcaattcatccatggggaatagaaggtgcacagcctgaagacagggatgtctcacac
attcttgccccaacaaccgctgcaggaggtgatttttgtgaaccttctgacatatataat
aacacatatggaggaggaggagtagtagcttctggtgttgaagaaactacaggtgttggc
tatggcactggtactggctacggaacagctggaggaatttctggaacaggggaagcaaaa
gggtcaattggaggaacaataaaagagtatcgagaaggaggagtgaacatggccttccta
gacaactatttctctgagaaagcatatgtgtatgcagatgaagatgaaggtcggccggca
aatgactgcctattaatttatgatcatgaaggagttggtactcctgttggctctgtgggt
tgctgcagctttattggagaagatacagatgaaacatacttggatacattaggaccaaaa
tttaagaccctagcagagatctgtctgggcaaagagatagaacctttccctgatgctaac
ccaccctggccaggcgtcaacattcccttccccagtcctgaaagtgatctaaatctcccg
ccaccgggcaccaccatcattgtcaacggaagtgcacctatgcctcccgccgctggcact
acaacggtggttactgaaaacacctacacatctgggacaaccatacagcccccgaggccc
atgccggatcccttgctccatggcaacatgacagtgaccgagacctacacctccagccag
cccactgtttgcgttgaccctctgcgtgcatccaacgtcgttgtgacggagagggtcgtg
gggcctgcgtctgcctctgatttgcgtggcatgctagatatccctgatctcacagagggc
tccaatgttatcgtcacggaaagagtaattgcgcctaactcccgactcccggcatctctg
agcattcctgatttggtagatgggtcaaatgtggtagtgacagaaagggtgttcaggcct
gcctccggcatgccgggcagcctaataaatattccctcagagttatccagtgcccacaac
gtagtggtcacagagagagtagtgtcaggggctgggatgagcagcctaggagcaacaagc
atgggaggagcaaatctggggagcctgagcagcacaggtcagatgctcagtgccgaatgt
catcttggtcagggaatgggcacggcatctccaggcacctcccggagacgagtgacgaag
tacagcaccatgcagtactccggccagtaa
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