Geospiza fortis (medium ground-finch): 102040934
Help
Entry
102040934 CDS
T03755
Symbol
SMC4
Name
(RefSeq) structural maintenance of chromosomes 4
KO
K06675
structural maintenance of chromosome 4
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gfr03036
]
102040934 (SMC4)
Chromosome and associated proteins [BR:
gfr03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
102040934 (SMC4)
Condensin II
102040934 (SMC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
AAA_29
ABC_tran
Motif
Other DBs
NCBI-GeneID:
102040934
NCBI-ProteinID:
XP_005419108
UniProt:
A0A6I9HE80
LinkDB
All DBs
Position
Un
AA seq
1306 aa
AA seq
DB search
MEGEQPTGTVPGKSTKTSTAARGKGREPLEESSMDMEVENEGTREPGKEPPQAASDEVVD
NRSLEEILGSIPPPPPPAMTSEPGAPRLMITHIVNQNFKSYAGEKTLGPFHKRFSCIIGP
NGSGKSNIIDSLLFVFGYRAQKIRSKKLSVLIHNSDEHKDIPSCSVEVHFQKITDKEGDD
YEVIPDSKFCVSRTAYRDNSSTYYINGKKKTFRDVGMLLRSHGIDLDHNRFLILQGEVEQ
IAMMKPKGQTEHDEGMLEYLEDLIGSARLKEPIRTLCRRVELLNEQRGEKLNRVKLVEKE
KDALEEDKNKAIEFLCLENQIFKEKNQMCQYYIHDLKKRINDLEMQKEKINEETKSINEK
SSKLAEETKTKNKALKELEKKCHKITKFIEENKEKFTQLDLQDVKVREKLKHAKSKAKKL
EKQLQKDKEKVEELKNVPSTSAKAIEDATAKKELLAKAKDKEEAKLRQVLASLQEETKGI
QKEKEGKEKELMEFSKEVTESRSNMEIAQSELELYLSKYNSALARLSQAQEALGSTSSTL
KERKAAIKDIAGKLPQAEQQLKEKENALEKLGREESGAKDLVRNLRRKVEEAKSSLAQSR
SRGKVLEALLQQKKCGNIPGLYGRLGDLGAIDDKYDVAISSSCGALDHIVVDTIDTAQAC
VNFLKAGGIGVATFIALDKMAVWEKKTQKIPTPENVPRLFDLVKVEDPKVRLAFYFALRD
TLVAKNLEEATRIAFQKEKRWRVVTLQGQIIEVSGTMTGGGGKVMKGRMGSSVVMDISEE
EISKMESQLQRDSKRAVQCEEEKSQLEEAIKKLQQDIREMRNTSEKYTASIQGFSEQEID
LKNQIKELEANVAAAAPDKTKQKELEKVLDGYKKDYERVAQKAGKMEEEVKRLHQLIMDT
NNQKLKAQQDKIDKIDKEMDECSSAITKAQVAAKTADRNLKKSEEALQRTEKEMEENEKE
MKKLTAEMTTLEDKATEVMNECKQAEEALPAVQEEKKNLLQEMKTIQDAEHALQSEALSI
KLKIEQIDGHISTHQGKVKYWQKEISKLSLHAIEGEAPEQLRVLSEEELEALQEPDVLSK
RIALLEAQQHQLRPNLGAIAEYRRKEELYLKHVEELDNITSERDKFREAFEQLRKQRLNE
FMAGFNVITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGG
EKTLSSLALVFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNN
MFEIADRLIGIYKTQNTTKSVATNPKILALKGLEELGLPACSVAER
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atggaaggggagcagccaacagggaccgtgccaggcaagagcaccaaaacctccactgca
gcccgtgggaagggcagggagcccttggaggagtcctccatggacatggaagtggaaaac
gaaggcaccagggagcctggcaaagaacctccccaagcagcctcagatgaggtggtggat
aatcgaagtttagaagagattttgggtagcatccctcctcccccacctccagcaatgacc
agtgaacctggtgctcctcgcctcatgatcactcacattgtaaaccagaacttcaaatcc
tatgcaggggagaaaactctgggaccttttcacaagcgtttttcatgtattatcgggcca
aatggcagtggcaaatccaatatcatcgattccctgctttttgtgtttggctatcgagcc
caaaaaatccgatccaaaaagctctcggtgctgatccataactctgatgagcacaaggac
atcccgagctgctctgtggaagttcacttccaaaagatcactgacaaggaaggagatgat
tatgaagtcattcctgacagcaaattctgtgtctctagaactgcctatagagacaattcc
tccacctactacatcaatggcaagaaaaagacattcagagatgttgggatgcttctccga
agccacgggattgacctggatcataacaggttcttaattttacagggggaggtggagcag
attgccatgatgaagcccaaggggcagacggagcacgacgaggggatgctggagtacctg
gaggatctgatcggctcggcgcggctcaaggagcccatccgcaccctgtgccgccgggtg
gagctgctcaacgagcaacgcggcgagaagttaaatcgagttaaactggtggagaaagaa
aaagatgccttagaagaggacaagaacaaagccattgagttcctttgcttggaaaaccaa
atatttaaggaaaagaatcagatgtgtcaatattacatccatgacctaaagaaacgaatt
aatgacctggaaatgcagaaggagaaaattaatgaagaaactaaaagtattaatgagaaa
agcagtaaacttgcagaggaaacaaaaaccaagaataaagctttgaaggaacttgaaaag
aaatgccataaaattacaaagttcatcgaggaaaataaagaaaaattcactcagttggat
ttgcaggatgtaaaagtgagggagaaactcaaacatgccaagagcaaggctaaaaaactg
gagaagcagcttcaaaaggacaaggaaaaggtggaggagctgaagaacgtcccctccacc
agcgccaaggccatcgaggacgccacggccaagaaggagctgctggcaaaggccaaggac
aaggaggaggccaagctcaggcaggtcctggccagcctgcaggaggagaccaagggaatc
cagaaggaaaaagagggcaaggagaaggaactgatggagttcagcaaggaggtgactgag
agccgctccaacatggagatagcgcagtcagagctggagctctacctgagcaagtacaac
tctgccctggcccgcctcagccaggcccaggaggccctgggcagcacctccagcaccctg
aaggaaaggaaagctgccatcaaagacatcgctggcaaactaccccaggctgagcagcag
ctcaaggagaaagagaatgctctggagaagctgggaagggaagaatccggagccaaggat
ctcgtgcgaaacctgcgccgaaaagtagaggaagccaaaagttctttagcgcagagtcgc
agccgaggaaaagtgctcgaggctctgctccagcagaagaaatgtgggaatattcctggc
ctctatggaaggctgggagacctgggagccatcgatgacaaatatgacgtggccatttcc
tcctcgtgtggagccttggaccacattgttgtggacaccattgacactgcccaggcctgt
gtgaacttcctgaaggctggagggattggagttgccacctttatagccctggacaagatg
gctgtgtgggaaaagaaaacgcagaaaatcccaactcctgagaacgtgccgcgcctcttt
gacctggtgaaggtggaggaccccaaggttcgcctggcattctacttcgctctcagggac
actctggtggccaaaaacctggaggaagccaccagaatagcattccaaaaggagaaaagg
tggagggtggtaaccctgcaaggacaaatcatcgaggtgtcaggaaccatgactggtggg
ggaggaaaagtcatgaaaggcagaatgggctcctcagtcgtgatggatatctcagaagaa
gagatcagcaagatggagtcccagctgcagagggattccaaaagagccgtgcagtgcgag
gaggagaaatcccagctggaggaagccataaagaaactgcagcaggacatccgggagatg
aggaacacctcggagaaatacacagcgagtatccagggattttctgagcaagaaattgat
ctcaaaaatcaaatcaaggaacttgaagccaacgtcgctgctgctgctccagacaaaacc
aaacagaaggagttggaaaaagtccttgatggttataaaaaagattatgagcgtgtggct
cagaaggccgggaagatggaggaggaggtgaaacggctgcaccagctcatcatggacacc
aacaaccagaaactgaaggctcagcaggacaaaattgataagattgacaaggaaatggat
gaatgttcctcagccatcaccaaggcccaggtggcagccaagactgcagacaggaacctg
aagaaatctgaggaggctctgcagcgcacggagaaggagatggaagaaaatgagaaggag
atgaagaaattgacagcagagatgacaacgctggaggacaaggccaccgaggtgatgaac
gagtgcaagcaggctgaggaagctttgccagcagtgcaggaggagaagaagaatttactc
caggagatgaaaactattcaggatgctgaacatgcccttcaaagtgaagctctgagcatc
aagctgaaaattgaacaaattgacggccacatttccacccaccagggaaaggttaaatac
tggcagaaagagatctccaagctgtccctgcacgccatcgagggcgaggcccccgagcag
ctgcgggtgctgagcgaggaggagctggaggcgctgcaggagcccgacgtgctcagcaag
agaatcgcgctgctggaggcacagcagcaccagctgcgccccaacctgggcgccatcgcc
gagtacaggcgcaaggaagagctgtacctgaagcacgtggaagaactggacaacatcacc
agcgagagggacaaattcagagaggcctttgaacagctgaggaaacagaggctgaacgaa
ttcatggcagggtttaatgtcatcaccaacaagctgaaggagaactaccagatgctcacg
ctgggaggggatgctgagctggagcttgtggacagtctggatcccttctcagagggaatc
atgttcagtgtccggcctcccaagaaaagctggaagaaaatcttcaacctgtcaggagga
gagaagacgctgagctcgctggccctggtgtttgccctgcaccactacaaacccaccccg
ctgtacttcatggacgagatcgacgctgccctggacttcaagaacgtctccatcgtggca
ttttacatctatgaacaaaccaaaaacgcccagttcatcatcatcagcctgcgcaacaac
atgtttgagattgcagacagattaattgggatttataaaacccagaacaccaccaaaagt
gtggccaccaaccccaaaatcctggctctgaaaggactggaggaacttggtctccctgcg
tgcagtgtggccgagagatag
DBGET
integrated database retrieval system
