Geospiza fortis (medium ground-finch): 102040936
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Entry
102040936 CDS
T03755
Symbol
PUS7L
Name
(RefSeq) pseudouridylate synthase 7 like
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gfr03016
]
102040936 (PUS7L)
Enzymes [BR:
gfr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
102040936 (PUS7L)
Transfer RNA biogenesis [BR:
gfr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
102040936 (PUS7L)
Prokaryotic type
102040936 (PUS7L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
R3H_PUS7L
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
102040936
NCBI-ProteinID:
XP_005419363
LinkDB
All DBs
Position
Un
AA seq
703 aa
AA seq
DB search
MLFRQAAAMLPSFSYLTEHTGFRGTIKNAPGDFVVTELEVPELFLGDSRAELLQNSGEAP
PAQSSPCPREPKRRRTEPPGPSAPACPRDAAPGPAGQGPGRAGGGCAASPGNSEREGEPE
LQPGLGEAPVLESLLGKPVSELLHKFACDVKDAWGSENNADAAAREFSLGPRLDKKIRAD
LHGAVRQKFPFLVTLTKGNEMIVKGNPDYRELCQLVTEKETSDFFKFLDAKLENSTFSFE
PDGNKEHRKTVHHFINRKFGKLLETKSFTVTDVNDQPSTSIMVRFREKTWSRKRCAGGFQ
EKQDVYTAFTLQKENLETLEAIGLLAAELDVLPSDFSYTGIKDKKAITLQPMVVKKVTPE
RLKEIGNKMEKKGMKIYNIRPAHQHLRLGQLKGNHFDIVVRDLQHHSHDSSADLKERIAE
AVENVETKGFVNYYGPQRFGQGQIVQTDQIGLALLNEKMVKAVKLFFTPEDTDDPVNNAK
RYFLQTEDAKGTLVMLPEFKVREKMLLRALNRYGVNHEGCTKGWLNIPHSLRIFYVHAYC
SKIWNEAASYRLKTYGSKVVEGDLVLEENDESISLNDKVHVVTAAEESANKYSIYQVVLP
MVGHSIKYPSNKVGQWYHERLSKDELELCKFRVSPLQLNIPGCYRLILKNVQNLSYFLES
SEKEIKIEDSHLNDLKVSLHISFDLDPSCYATVCLREIMKCDF
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgctcttccggcaggccgcggccatgctgccctccttcagttacctgaccgagcacacc
ggcttccgcggcaccatcaaaaacgcgcccggggacttcgtagtgacggagctcgaggtg
cccgagctcttcctcggggactcccgagctgaattgctccaaaacagcggcgaagcgccg
ccggcacagagcagcccgtgtccgagggagcccaaaaggcggaggacggagccccccggg
ccgagtgcccccgcgtgtccccgggatgcagcgcccgggcccgcggggcagggcccaggc
cgggcgggaggcggctgtgctgcatccccgggcaatagcgagcgtgagggagagcccgag
ctgcagcccggcctcggggaagccccagtgttggagtccttgctcggcaagcccgtgagc
gaactgctccacaagtttgcctgcgatgtgaaggatgcgtggggctcggaaaacaatgcg
gatgctgctgctagggagttctcgctaggaccaaggctggacaagaaaattcgagctgat
ttacacggtgctgttaggcagaaattcccctttctagtcactcttacaaaaggcaatgaa
atgattgtaaaagggaatcctgattacagagagctttgtcagttagtgactgaaaaggaa
acaagtgatttctttaaatttttggatgcaaagctagaaaattctacgttttcctttgag
cctgatggaaacaaagagcacagaaaaacagttcaccactttatcaatagaaaatttgga
aagcttttagaaacaaaatcttttactgtgacagatgtcaatgatcagccaagtacatca
ataatggtacggtttcgagaaaaaacttggtccagaaaaaggtgtgctggtggttttcag
gagaagcaagatgtttatacagctttcacccttcagaaagaaaacctagaaacactagaa
gcaatcggcttgttggcagctgaacttgacgttcttccttcagacttcagttacactggc
atcaaagataagaaggctatcactttgcagcctatggtggtgaagaaggtgactcctgag
aggttgaaggaaattggaaacaaaatggaaaaaaagggtatgaaaatatacaacatccgt
ccagcacaccagcacctcagacttggccagctgaagggcaatcactttgacatagttgtg
agagatctccagcaccacagtcatgactcttctgcagatttgaaggagagaatagctgaa
gcagtagaaaatgttgagacaaaaggttttgtgaattactacggacctcagcgatttgga
caaggacaaattgttcagacagatcaaataggattggctttactgaatgaaaaaatggtg
aaagctgtgaagttatttttcacacctgaagatactgatgatcctgtaaacaatgcaaaa
agatactttcttcaaactgaagatgcaaagggcacacttgtaatgctgccagaatttaaa
gtaagagagaagatgttgctacgagctttaaatcgctatggtgtaaatcatgaaggttgt
accaaaggatggctcaacattcctcactccttgcgcatattctatgtccatgcttattgc
agtaaaatttggaatgaagcagcatcatataggctgaagacttatggctccaaagtggtt
gagggtgatcttgtcttggaagaaaatgatgaaagcatttccctgaatgacaaggttcat
gtagtcactgctgcagaagaatcggcaaacaaatattctatataccaagtggttcttcca
atggtgggacacagtatcaagtatcccagtaataaagttggacaatggtaccatgaaaga
ctttctaaggatgagctggagttgtgcaaattcagagtgtctccgctacagctaaatata
cctggatgctacagactcattttgaaaaatgttcagaatctctcatattttttggaaagt
agtgaaaaagagatcaaaattgaggacagccatctgaatgatttaaaagtctctcttcat
atatcatttgaccttgatccttcatgttatgcaacagtctgtctgagagaaataatgaaa
tgtgatttttaa
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