Geospiza fortis (medium ground-finch): 102040965
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Entry
102040965 CDS
T03755
Symbol
TRIM25
Name
(RefSeq) tripartite motif containing 25
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04622
RIG-I-like receptor signaling pathway
gfr05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
102040965 (TRIM25)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
102040965 (TRIM25)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gfr04121
]
102040965 (TRIM25)
Enzymes [BR:
gfr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102040965 (TRIM25)
Ubiquitin system [BR:
gfr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102040965 (TRIM25)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PRY
ANCHR-like_BBOX
zf-B_box
BRE1
AHH
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
102040965
NCBI-ProteinID:
XP_014164410
LinkDB
All DBs
Position
Un
AA seq
531 aa
AA seq
DB search
MGGEIRRAPRKSLGQTAEEEEEEISGTICSQPPVSCASCREVPAVQTCLTCTASFCAEHL
RPHRDSPAFRDHQLCPTVRDLQLRKCPQHNRLFEFFCGKHGVCICSLCLLGHKLCPTSPL
EQAKASAQSLLKKKLGELHNQSERTARAMSTVKTKQNQSAETASRKKELIRNEFSEVKAV
IEERENEIMKAITEEEKRVWNKFDYIYSVLGNKKNEIQSLKDQIEVALTESDDILFLKRA
TALQRTSTKEAFVPVVEMDQNVMHSTYQSAITLKDIVKLSIMQSREKKEEDQTRKEKTGP
QAQNTPQGETDTTKEKKKAAKVAPPTAPTAPAAAAAAKDLIASFLKKPREELLQYAANIT
LDYNTAHNTVVLADNYTRMSISDTFPGHRQHPQRFTDYRQVLGFQCFKRGIHYWEVELQQ
GSFCGLGVCYGSMERQGPQSRLGRNSRSWCIEWLNSKLSSWHNDVEKCLPNTKATKIGVL
LHCDGGFLIFMAVGEKNNLIYKFKAQFTEALYPAFWLFSSDAVLSLCHMKE
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgggtggagaaatacggagggcaccaaggaagtccctgggacagacggcagaagaggaa
gaggaagagatcagtgggacaatttgcagtcaaccccccgtgtcctgcgccagctgccgg
gaggtgccggccgtgcagacctgcctgacctgcaccgcgtccttctgcgccgagcacctg
cggccgcaccgcgacagccccgccttccgcgaccaccagctctgccccaccgtgcgcgac
ctgcagctgcgcaagtgcccccagcacaacaggctcttcgagttcttctgcggcaagcac
ggcgtctgcatctgctccctgtgcctgctcgggcacaagctgtgccccaccagccccttg
gagcaggcaaaagcctctgcccagtcgctgctgaagaaaaaacttggggagctgcataac
cagagtgaaagaactgcccgggcaatgagcacggtgaaaacaaaacagaaccaatctgct
gagacagcttcaagaaagaaggaattgatcagaaatgagttttcagaagttaaagctgta
attgaagaaagagaaaatgagatcatgaaagcaattacagaggaagaaaagagagtttgg
aataagtttgattatatttacagtgttctgggaaataagaagaacgaaattcagtctctc
aaagatcagattgaggtggcactgactgaaagtgatgatattctgtttttgaagagagca
acagcactgcaacgaacatcaacaaaagaggcttttgttcctgtagttgaaatggaccaa
aatgtgatgcattccacttaccagtctgccattaccctcaaagacatagtgaaactttca
ataatgcagagtcgggagaaaaaagaagaagaccagacccgcaaagagaaaactggaccc
caggctcaaaacactccacagggggagacagataccaccaaagagaaaaagaaagctgct
aaagttgcaccacccaccgcaccaactgccccagctgctgctgctgctgctaaagatctg
attgccagcttcctgaagaaacccagagaggagctcttgcagtacgctgccaacatcacc
ctggactacaacacagcccacaacaccgtggttctggctgacaactacaccaggatgtcc
atctcagacaccttcccaggccacaggcagcaccctcagcgcttcaccgattaccgccag
gtgctgggcttccagtgcttcaagaggggcatccactactgggaggtggagctgcagcag
ggcagcttctgcggcctcggcgtctgctacggcagcatggagcgccagggcccccagagc
cgcctgggcaggaacagcaggtcctggtgcatcgagtggctcaactccaaattgtcctcc
tggcacaacgacgtggaaaagtgcctgcccaacacaaaggctaccaagatcggggtgctg
ctccactgcgatgggggctttctgattttcatggcggtgggggagaagaataacctgatc
tataaattcaaagcccagttcactgaagccttgtacccagccttctggctcttctccagt
gatgctgttctctctctctgtcacatgaaagagtaa
DBGET
integrated database retrieval system