Geospiza fortis (medium ground-finch): 102040996
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Entry
102040996 CDS
T03755
Symbol
UIMC1
Name
(RefSeq) ubiquitin interaction motif containing 1
KO
K20775
BRCA1-A complex subunit RAP80
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102040996 (UIMC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gfr03400
]
102040996 (UIMC1)
DNA repair and recombination proteins [BR:
gfr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
102040996 (UIMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAP80_UIM
UIM
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
102040996
NCBI-ProteinID:
XP_014167725
UniProt:
A0A6I9ZD83
LinkDB
All DBs
Position
Un
AA seq
812 aa
AA seq
DB search
MPRRKKPAEGLESRGQDGEEEEEEKRNPANARKKRSFVDAFIVISDSDGEQESKEESGLQ
KKRTKQLDRTKFAAKRKIAQMTEEEQFALALKMSEQEARQVNCQEEEEEELLRKAIAESL
SSCQPSDSSTASPHLSVEALDSQGQSQPAEKEGSELLGGLAFCPDTPPSDCSSHSQSSRA
DGNGQMDVARSPLVVLRRLSQEIVESSLVSSIIVSPGKGQPVTRSSEKSSSPAKSDSSNM
LPSTLGEDFMSLSPTFGKVASGTSWRLTPRRLFNSPSSSSEAAGHEPKEQLLPCTGHSAG
EAGAGSSATPLWKSRTTEQCDSPRRSGGGAGTKHSSQPGHTAKVSVSTEQAEQNEGSGST
PDLCMLTVEEKQKQEEAKNTVHYYWGIPFCPKGVDPNQYTKVILCQLEVYQKSLKQAQRQ
LLHKKEFGNPVVPSPSLSQNELGKGEAISRENGTADGTEDGDTEGQESENITWLHPSKRR
EAESPGHSMEEEKNSTSDDEPTTSYCQPSQVLPAEDVPEDGEPMQIAQSISTMTPLGSKR
NPDTATENSAEEEISVCPETQPSPLEAIEEREELCSGSRGAPMQVGGDEDAGRAVSECSP
AAAAHVSCPLCDHSFPAEEIEVHAMYCDGAAGPEPAQDAPVLTRRQREARNKAAGGKSSP
PSSDIDKCEKCYLCKSLVPLLQYQRHVDSCLQAARQAQGTRRLRRAKDTGRQERGLLRML
ELSESKSEGADTGTPLTGLGDQQSSPTLSAADGEPSADSPISLQHLPFHGSRAKPGISLE
AMDGVVDSEPCTALHAGSQQRPRGCRRRRHKF
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggaggaagaagcctgcagagggcctggagtctcgaggtcaggatggggaggaa
gaggaggaagagaagaggaacccagccaatgccaggaagaagcgcagttttgtggatgcg
tttattgttatatccgacagtgatggagagcaggagtcaaaggaagagagtggcttgcaa
aagaagagaacaaagcagctggatcgaacaaagtttgctgctaaaagaaaaattgcacag
atgactgaagaggaacaatttgcactggccctgaaaatgagtgagcaagaggctagacaa
gtgaactgtcaggaagaggaagaggaggagctcttgaggaaggccattgctgagagcctt
agtagctgtcagccctcagactcatcgactgcatctcctcatctgtcagtggaagcacta
gattcacagggccaaagccagcctgctgagaaagaaggctctgagctcctgggaggcctg
gcattctgccctgacacccctccctctgactgcagctcccactcacagagctccagagct
gatgggaatggacagatggatgtcgcccggagccccttggtagtgttgaggaggttgagc
caggaaatcgttgaaagctcactagtatccagcataatcgtgtctccggggaagggccag
cctgtgacaaggtcaagtgaaaagtcttcctcaccagcaaaaagtgattcgagtaacatg
ttacccagcactctgggagaggacttcatgtctttgagtcccacctttggcaaggtggct
tcaggaacctcctggcgactgacacctcggagactgttcaacagcccctccagctcttct
gaagcagcaggccacgaaccaaaagagcagctcctaccctgcactggccattctgcagga
gaagctggtgctgggagctcagccactccactctggaagagcaggaccacagaacagtgt
gacagccccaggaggagtggtggaggagcaggtaccaaacacagctcacagcctgggcac
accgccaaggtctctgtttccacagagcaagcagagcagaatgaggggtctggcagtacc
ccagatctttgcatgctgactgtggaggagaagcagaaacaggaggaggcaaaaaacaca
gtgcactattactggggcatccccttctgccccaaaggggtggaccccaaccagtacacc
aaagtcatcttgtgtcagctggaggtttaccagaagagcctgaagcaggctcagaggcag
ctgttgcataagaaggagtttggtaacccggttgtgcccagtccttccttgagccaaaat
gagcttgggaaaggagaagcgataagcagggagaatgggactgctgatggtacagaagat
ggagacacagagggacaagagtctgaaaacatcacctggctccacccttcaaagaggagg
gaggcagagagtccagggcacagcatggaagaagagaagaactccacttctgatgatgaa
ccgaccaccagctactgccagccctcccaggtactgcctgcagaggatgtgcctgaagat
ggggaacccatgcaaattgcacagagcatctccacaatgaccccacttggcagtaaaagg
aacccagatactgccacagaaaactctgctgaagaagagatctctgtttgcccagagact
cagccaagcccactggaagctattgaggagagagaagagctctgttcaggcagcagaggt
gcacctatgcaggttggtggggatgaagatgctggcagggctgtgtctgagtgcagtcct
gcagctgctgcccatgtgtcatgccctctgtgtgaccacagcttcccagctgaggagatc
gaggtgcacgccatgtactgcgacggcgcggcgggacctgagcctgctcaggacgctcca
gtgctcacccggcgtcagagagaggcaagaaataaagctgccggtggtaaaagcagtcca
ccatcctcagacattgacaagtgtgagaagtgctacctctgtaagtcactggtgccactg
ctgcagtatcagaggcacgtggacagctgccttcaggctgctaggcaagctcagggaacc
aggaggctgcgaagagccaaggacactggaaggcaggagagaggactcctcaggatgctg
gagctctcggagagcaaatctgaaggtgctgacacggggacccccctcactggattagga
gatcagcagtcctctcccacgctctcagccgctgatggggagccatcagcagacagcccc
atctcccttcagcaccttcctttccatggctcccgtgccaaacccggcatctccttggaa
gccatggatggcgtggtggactcggagccatgcacggctctccatgcgggcagccagcaa
cggcccagaggctgccgccggagaagacacaagttctga
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