Geospiza fortis (medium ground-finch): 102041043
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Entry
102041043 CDS
T03755
Symbol
ATG4A
Name
(RefSeq) autophagy related 4A cysteine peptidase
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04136
Autophagy - other
gfr04140
Autophagy - animal
gfr04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
102041043 (ATG4A)
04140 Autophagy - animal
102041043 (ATG4A)
04136 Autophagy - other
102041043 (ATG4A)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gfr01002
]
102041043 (ATG4A)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gfr04131
]
102041043 (ATG4A)
03029 Mitochondrial biogenesis [BR:
gfr03029
]
102041043 (ATG4A)
Peptidases and inhibitors [BR:
gfr01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
102041043 (ATG4A)
Membrane trafficking [BR:
gfr04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
102041043 (ATG4A)
Mitochondrial biogenesis [BR:
gfr03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
102041043 (ATG4A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
102041043
NCBI-ProteinID:
XP_005419973
LinkDB
All DBs
Position
Un
AA seq
396 aa
AA seq
DB search
MHVLSRYENQITILSDYLEEFPETDEPVWILGRQHHLNTDKSKLLLDISARLWFTYRRKF
SPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWQWEKHKKQPEEYHRILRCFLDR
KDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKLALFDEWNSLAVYVSMDNTVVIED
IKKMCWCPAQSSSVAHSSAHLHRSALGPNKNTAGLCPGWKPLLLIIPLRLGINHINPVYI
DAFKECFKMPQSLGALGGKPNNAYYFIGFLGNELIYLDPHTTQSFVDSEENGTVDDKSFH
CQQAPHRMKIMNLDPSVALGFFCKEECDFDNWCSLVQKEILKQQSLRMFELVQKHPPHWP
PFIPPTKPEVTTTGAELIESTDKLFELEEEFEILSV
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgcatgttttgtctaggtatgaaaaccagatcactattttgtcagactacttagaagaa
tttccagaaactgatgagccagtgtggattttaggaaggcaacaccacctaaacacagac
aaatctaagttattgttggatataagtgctcgtctctggttcacatatagaagaaagttt
tcacctattggaggcactggtccctcgtctgacgcaggctggggatgcatgctgaggtgt
gggcagatgatgctggcccaggcactgatctgcagacatttaggaagagattggcaatgg
gaaaaacacaaaaagcaaccagaagaatatcatagaatcttacggtgctttctggataga
aaagattgctgttattccatccaccaaatggcacagatgggtgttggagaggggaagtcc
attggagagtggtttggaccaaatacagttgctcaagtgctgaagaagcttgctttattt
gatgaatggaattcattagcagtttatgtatctatggacaatacagtggtcatcgaggac
atcaagaagatgtgctggtgccctgcccagagcagcagtgttgcccacagcagtgcacat
ttgcacagaagtgctcttggcccaaacaagaacacagcaggattgtgcccaggctggaag
cccctcctgctcattatccctctccggctagggattaatcacatcaatccagtgtatatt
gatgcgtttaaagaatgctttaagatgccacagtctttgggagcattaggagggaaaccc
aataatgcctattattttataggatttttaggcaatgagctgatctacttggaccctcac
accactcagagttttgtagattcagaagaaaatggcacagttgatgacaagagcttccac
tgccagcaagccccacacagaatgaagatcatgaatttggacccttcagtagctttaggc
ttcttttgcaaagaagaatgtgattttgataactggtgtagtcttgtacaaaaggagatt
ctaaagcagcagagcctacggatgtttgagctggtccagaagcacccaccccactggcct
cctttcatacctccaaccaagccagaagtgacaaccacaggagcagaactcatagaatct
actgacaagctatttgaattggaagaagaatttgaaatcctgagtgtatga
DBGET
integrated database retrieval system
