KEGG   Geospiza fortis (medium ground-finch): 102041061
Entry
102041061         CDS       T03755                                 
Symbol
VPS33A
Name
(RefSeq) VPS33A, CORVET/HOPS core subunit
  KO
K20182  vacuolar protein sorting-associated protein 33A
Organism
gfr  Geospiza fortis (medium ground-finch)
Pathway
gfr04140  Autophagy - animal
gfr04148  Efferocytosis
gfr05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    102041061 (VPS33A)
   04148 Efferocytosis
    102041061 (VPS33A)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    102041061 (VPS33A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gfr04131]
    102041061 (VPS33A)
Membrane trafficking [BR:gfr04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    102041061 (VPS33A)
   Hops complex
    102041061 (VPS33A)
SSDB
Motif
Pfam: Sec1
Other DBs
NCBI-GeneID: 102041061
NCBI-ProteinID: XP_005424140
LinkDB
Position
Un
AA seq 570 aa
MPRAIVWDEYLTGPFGLIAQYSLLKEHEVEKMFTLKPGRLPPADVKNIIFFVRPKLELMD
IITDNVLREDRGRSPQRDFHILFVPRRSLLCEQWLKEQGVLGSFIHREQYSLDLIPFDGD
LLSMESESAFKECYLESDQTSLYHAAKGLMTLQALYGTIPQIFGKGDCARHVANMMIRMK
REFPGSQNSIFPVFDTLLLLDRNVDLLTPLATQLTYEGLIDEIYGIQNTYVKLPPEKFAP
KKQGEGGKDLPTEPKKLQLNSAEELYAEIRDKNFNAVGSVLSKKAKIISAAFEERHHAKT
VGEIKQFVSQLPHMQAARSSLANHTSIAELIKDITTSEDFFDNLTVEQEFMSGIDTDKVN
NYIEDCIAQKHPLIKILRLVCLQSVCNSGLKQKVLDHYKREILQTYGYEHILTLNNLEKA
GLLKPQTGGRNNYPTIRKTLRLWMDDVNEQNPNDISYVYSGYAPLSVRLAQLLARPGWRS
IEEVLKMLPGPHFEERQQLPTGLQKKRQQGENRVTLVFFLGGVTYAEIAALRFLSQMEDG
GTEYIIATTKLINGTTWIKSLMEKLEPAPF
NT seq 1713 nt   +upstreamnt  +downstreamnt
atgcccagggccatcgtgtgggatgagtacctgaccggccccttcgggctcatcgcgcag
tactcgctgctcaaggagcatgaggtagagaagatgttcacgctcaagccgggccggctg
cccccggccgacgtcaagaacatcatcttcttcgtcaggcccaagctggagctgatggac
atcatcaccgacaacgtgctcagggaagacagaggccgctctccgcagagggatttccac
atcctgttcgtgccgcgccgcagcctcctgtgcgagcagtggctgaaggagcagggcgtg
ctgggctccttcatccaccgcgagcagtacagcctggacctgatccccttcgatggagac
ctgctctccatggagtccgagagcgccttcaaggaatgttacctggagagtgaccagacc
agtctgtaccatgcagcaaaggggctgatgaccctgcaggctctctacggaaccatcccg
cagatttttgggaaaggcgactgtgctcggcacgtggccaacatgatgatcaggatgaag
cgggagttccctgggagccagaattccatatttcctgtctttgataccctcctgctgctg
gaccgcaacgtggacctgctgacgccgctggccacgcagctgacgtacgaggggctgatc
gatgagatctacggcatccagaacacttatgtgaaactccctcctgagaagtttgccccg
aagaagcagggggaaggtggcaaagatctccccacagaacccaagaagctccagctgaac
tctgcagaagagctttatgctgaaatccgagacaagaacttcaatgctgtggggtcagtg
ctgagcaagaaagccaagatcatctcagcagcctttgaggaaaggcaccatgccaagact
gttggagagattaagcagtttgtgtcccagctgcctcacatgcaggcggcgaggagctcg
ctggccaaccacacctccatcgcagagctcatcaaagacatcaccacatctgaagatttc
tttgataatttaacagtggagcaagagttcatgtctggaatagacacagacaaggttaac
aattatattgaagactgcatagctcagaaacatccactaatcaagatcttgcgtctcgtt
tgtttgcaatccgtgtgcaatagtgggctgaagcagaaggttctggaccattacaaaaga
gagattctccagacttatggttatgaacatatattgaccttaaacaacctggaaaaggct
ggactcctgaaaccccagacaggtggcaggaataactacccaacaatcaggaaaacactg
cgcctgtggatggatgatgttaatgagcagaaccccaatgacatctcgtacgtgtacagc
ggctatgccccgctgagcgtgcgcctggcgcagctgctggcccggccgggctggcgcagc
atcgaggaggttctgaagatgctgccagggccccactttgaggagaggcagcagctcccc
actggcctgcagaaaaagcgtcagcaaggtgagaacagagtgaccctggtgttcttcctg
ggcggggtcacgtacgcagaaatcgccgcgctgaggttcctgtcgcagatggaggatgga
ggcacagagtacatcattgccactacaaaactcatcaacggcacaacctggatcaaatcc
ttgatggagaaactggagcctgccccattctag

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