Geospiza fortis (medium ground-finch): 102041061
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Entry
102041061 CDS
T03755
Symbol
VPS33A
Name
(RefSeq) VPS33A, CORVET/HOPS core subunit
KO
K20182
vacuolar protein sorting-associated protein 33A
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04140
Autophagy - animal
gfr04148
Efferocytosis
gfr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102041061 (VPS33A)
04148 Efferocytosis
102041061 (VPS33A)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
102041061 (VPS33A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gfr04131
]
102041061 (VPS33A)
Membrane trafficking [BR:
gfr04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
102041061 (VPS33A)
Hops complex
102041061 (VPS33A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
102041061
NCBI-ProteinID:
XP_005424140
LinkDB
All DBs
Position
Un
AA seq
570 aa
AA seq
DB search
MPRAIVWDEYLTGPFGLIAQYSLLKEHEVEKMFTLKPGRLPPADVKNIIFFVRPKLELMD
IITDNVLREDRGRSPQRDFHILFVPRRSLLCEQWLKEQGVLGSFIHREQYSLDLIPFDGD
LLSMESESAFKECYLESDQTSLYHAAKGLMTLQALYGTIPQIFGKGDCARHVANMMIRMK
REFPGSQNSIFPVFDTLLLLDRNVDLLTPLATQLTYEGLIDEIYGIQNTYVKLPPEKFAP
KKQGEGGKDLPTEPKKLQLNSAEELYAEIRDKNFNAVGSVLSKKAKIISAAFEERHHAKT
VGEIKQFVSQLPHMQAARSSLANHTSIAELIKDITTSEDFFDNLTVEQEFMSGIDTDKVN
NYIEDCIAQKHPLIKILRLVCLQSVCNSGLKQKVLDHYKREILQTYGYEHILTLNNLEKA
GLLKPQTGGRNNYPTIRKTLRLWMDDVNEQNPNDISYVYSGYAPLSVRLAQLLARPGWRS
IEEVLKMLPGPHFEERQQLPTGLQKKRQQGENRVTLVFFLGGVTYAEIAALRFLSQMEDG
GTEYIIATTKLINGTTWIKSLMEKLEPAPF
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgcccagggccatcgtgtgggatgagtacctgaccggccccttcgggctcatcgcgcag
tactcgctgctcaaggagcatgaggtagagaagatgttcacgctcaagccgggccggctg
cccccggccgacgtcaagaacatcatcttcttcgtcaggcccaagctggagctgatggac
atcatcaccgacaacgtgctcagggaagacagaggccgctctccgcagagggatttccac
atcctgttcgtgccgcgccgcagcctcctgtgcgagcagtggctgaaggagcagggcgtg
ctgggctccttcatccaccgcgagcagtacagcctggacctgatccccttcgatggagac
ctgctctccatggagtccgagagcgccttcaaggaatgttacctggagagtgaccagacc
agtctgtaccatgcagcaaaggggctgatgaccctgcaggctctctacggaaccatcccg
cagatttttgggaaaggcgactgtgctcggcacgtggccaacatgatgatcaggatgaag
cgggagttccctgggagccagaattccatatttcctgtctttgataccctcctgctgctg
gaccgcaacgtggacctgctgacgccgctggccacgcagctgacgtacgaggggctgatc
gatgagatctacggcatccagaacacttatgtgaaactccctcctgagaagtttgccccg
aagaagcagggggaaggtggcaaagatctccccacagaacccaagaagctccagctgaac
tctgcagaagagctttatgctgaaatccgagacaagaacttcaatgctgtggggtcagtg
ctgagcaagaaagccaagatcatctcagcagcctttgaggaaaggcaccatgccaagact
gttggagagattaagcagtttgtgtcccagctgcctcacatgcaggcggcgaggagctcg
ctggccaaccacacctccatcgcagagctcatcaaagacatcaccacatctgaagatttc
tttgataatttaacagtggagcaagagttcatgtctggaatagacacagacaaggttaac
aattatattgaagactgcatagctcagaaacatccactaatcaagatcttgcgtctcgtt
tgtttgcaatccgtgtgcaatagtgggctgaagcagaaggttctggaccattacaaaaga
gagattctccagacttatggttatgaacatatattgaccttaaacaacctggaaaaggct
ggactcctgaaaccccagacaggtggcaggaataactacccaacaatcaggaaaacactg
cgcctgtggatggatgatgttaatgagcagaaccccaatgacatctcgtacgtgtacagc
ggctatgccccgctgagcgtgcgcctggcgcagctgctggcccggccgggctggcgcagc
atcgaggaggttctgaagatgctgccagggccccactttgaggagaggcagcagctcccc
actggcctgcagaaaaagcgtcagcaaggtgagaacagagtgaccctggtgttcttcctg
ggcggggtcacgtacgcagaaatcgccgcgctgaggttcctgtcgcagatggaggatgga
ggcacagagtacatcattgccactacaaaactcatcaacggcacaacctggatcaaatcc
ttgatggagaaactggagcctgccccattctag
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