Geospiza fortis (medium ground-finch): 102041087
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Entry
102041087 CDS
T03755
Symbol
SEC31A
Name
(RefSeq) SEC31 homolog A, COPII coat complex component
KO
K14005
protein transport protein SEC31
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102041087 (SEC31A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gfr04131
]
102041087 (SEC31A)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
gfr02044
]
102041087 (SEC31A)
Membrane trafficking [BR:
gfr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
102041087 (SEC31A)
Secretion system [BR:
gfr02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
102041087 (SEC31A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_2nd
TPR_Sec16
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_HPS5
SRA1
Beta-prop_WDR35_TULP_N
Prp18
Beta-prop_DCAF4
Beta-prop_SPT8
DUF3724
Motif
Other DBs
NCBI-GeneID:
102041087
NCBI-ProteinID:
XP_014167411
LinkDB
All DBs
Position
Un
AA seq
1174 aa
AA seq
DB search
MKLKEVDRTAMQAWSPAQQHPIYLATGTSAQQLDATFSTSASLEIFELDLADPSLDMKSC
ATFSSSHRYHKLIWGPHSMTSGDRVSGVLIAGGENGNVILYDSAKIIDGEAEVIIAQKDK
HTGPVRALDVNMFQTNLVASGANESEIYIWDLNNFATPMTPGVKTQPLEDISCIAWNRQV
QHILASASPSGRATVWDLRKNEPIIKVSDHNNRMHCSGLAWHPEVATQMVLASEDDRLPV
IQMWDLRFASSPLRVLESHTRGILAIAWSMADPELLLSCGKDAKILCSNPNTGEVLYELP
TNTQWCFDIQWCPRNPAVLSAASFDGRISVYSIMGGSADGLRQKQVDQLSSSFGNLDPFG
TGQPLPPLQLPQQTAPQSVVMPLKKPPKWIRRPMGASFSFGGKLVTFENSKPPQQPGMEQ
QQQHPHVYVSQVVTEKEFLARSNQLQEAVQSQGFVSYCQKKMDMALADFERNVWAFLKVN
FEEDSRVRYLELLGYRKDDLKKKTLKDRKKETEDLGPAKTTFNISVSGDVDGLITQALLT
GNFESAVDLCLHDNRMADAIILAIAGGQELLSRTQEKYFAKMRSKITRLITAVVTKNWKE
IVQSCDLQNWREALAAVLTYARPDEFTALCDLLGSRLENEGDSILQTQACLCYICAGNVD
KLVACWTKVQDGNSPLSLQDLIEKVVILRKAVQLTQAVDPNTMGALLAEKMSQYANLLAA
QGSLAAALSFLPANTNQPNIVQLRDRLCRAQGQLPAGQELKAPQEREPMAKGRAGPGAGR
MQAPQAPAQQYYQQGDNPPPPGFIMPGVVGPSMPPQQATSSNYSMYSQAGTRPAYPQTYQ
ATQQYSGTGGPALYQPQQPVAAPASASYPSPAPNTTPSYLPSAPAHSMPSPLYPGQPQPS
PTSLNPISSFPVPPSGTSFQHGRPGLPATPVGYALPTGPTGPQNGWNDPPTLNRAAKKKK
VPENFLPPVPITAPIMNPLADPQAQMQQPQAPAPPSSAPSFQPAHLPAGQMVLQGGFQPA
AQPLGPSTMAPTASKPSTEGAPGAPIGNAIQHVQALPTEKITKKPIPEEHLILKTTFEAL
IQRCLLSASDPQTKRKLDDANKRLEFLYDKLREQTLSPTIISGLHNIVKSIETRNYQEGL
NIHTHIVSTSNFSETSAFMPVLKVVLTQANKLGV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaaggaagtagaccgtactgccatgcaggcatggagccctgcccagcagcac
cctatttacctggccacaggtacctcagctcagcagctggatgcaaccttcagtacaagt
gcttctctagaaatatttgagttggacttagcagacccttccctggatatgaagagctgt
gccacattctcctcctcgcacaggtaccacaagctgatctggggccctcacagcatgacc
tcaggggacagagtgtctggagtcctgattgctgggggtgaaaatggcaacgtcatcttg
tatgactcagccaaaatcatagatggagaggctgaggtaataatagcccagaaggacaag
cacacgggaccagtgagagcacttgatgtcaacatgttccagactaatctggtggcctct
ggtgctaatgagtctgaaatctatatctgggacttgaacaactttgctacaccaatgaca
ccaggagtgaagacacagcctctggaggacatcagctgcattgcatggaacaggcaagtg
cagcacatcctggcatccgccagccccagcggcagggccaccgtctgggacctcaggaag
aacgagcccatcatcaaagtcagcgaccacaacaacaggatgcactgctcaggcttggca
tggcaccctgaagttgccactcagatggttttggcctcggaggatgacaggctgcctgtt
attcagatgtgggacctgagatttgcctcctcaccacttcgtgttctagaaagtcacacg
aggggtatattggccattgcttggagtatggcagatccagagctgctacttagctgtggg
aaggatgctaaaattctctgctccaaccctaacacaggagaggtgctgtacgagctgccc
acgaacacgcagtggtgctttgatatccagtggtgcccaaggaaccctgctgtgctgtct
gcagcctccttcgacggccgcatcagcgtctactccatcatgggcggcagcgccgatggc
ctcaggcagaaacaagttgaccagctctcctcgtcttttgggaaccttgatccctttggc
acgggccagcccctgcctcccctgcagctcccccagcagactgccccacagagtgtggtg
atgcctctgaagaaaccacccaagtggatccggcgacccatgggagcgtccttctcgttt
ggaggcaagctggtgacgtttgagaattccaagcctcctcagcagccaggcatggagcag
cagcagcagcatccccacgtctacgtgagccaggttgtcacagagaaggagttcctggcc
cgctcaaaccagctgcaggaggctgtgcagtcccagggctttgtcagctactgccagaag
aaaatggacatggccctggctgactttgaaaggaacgtgtgggccttcttaaaggtgaac
ttcgaagaagattcacgtgttagatacctcgagctcttaggatacaggaaggatgatctg
aagaagaagacgctgaaggaccgtaaaaaagaaaccgaagatttgggacctgcaaagaca
acatttaacatttctgttagtggagatgtggatgggctgatcacacaggctctgctgaca
gggaactttgaaagtgcagtggatctgtgcctgcacgacaaccgcatggccgacgccatc
atcctggccatcgccggcgggcaggagctgctctctcggactcaggagaagtactttgcc
aagatgcgcagcaaaattaccaggctcatcactgcagttgtaacaaagaactggaaagag
attgtgcagtcttgtgacctgcagaattggagagaggccttggctgctgtgctcacttat
gccaggccagatgagtttacagccctctgtgatctcctgggtagcaggctggagaatgag
ggggacagcattctgcagacacaagcttgcctctgttacatttgtgctggcaacgtggat
aaacttgttgcttgttggaccaaagttcaggatggaaacagccccttgtcccttcaggat
ttgatagagaaggtggtgatcctgcgcaaagccgtgcagctcacgcaggccgtggacccg
aacaccatgggtgcccttttggccgagaagatgagccagtatgccaacctgctggctgct
cagggaagcctggctgcagcactctccttcctccctgccaacaccaaccagcccaacatc
gtgcagctgcgggacaggctctgcagagcccaggggcagctcccagcgggacaggagctc
aaggcgccccaagagagagagcccatggccaaagggagagctggccctggggctggacgg
atgcaggcaccccaggctccagcccagcagtattaccagcagggggacaacccacctcct
ccagggtttattatgccaggtgttgttggccccagcatgccaccccagcaagccacatct
tccaactacagcatgtactcgcaagcaggaacgcggccagcgtacccacagacatatcag
gccacacagcagtactctggaactgggggaccagctctctatcagcctcagcagcctgtt
gctgcccctgcttcagcctcttaccccagccctgcccctaacaccaccccctcctacctg
ccctctgcccctgcccactccatgccctccccgctgtaccctgggcagcctcagccctcc
ccaaccagcctgaatcccatctcttccttccctgttcctccctctggcacatcctttcag
catggcaggccaggacttccagcaactcctgtgggttatgcattacctactggaccaaca
gggccccagaacggctggaatgaccctcccaccctcaacagagctgccaagaagaagaag
gtccctgagaacttcctgcccccggtgcccatcaccgcccccatcatgaacccgctggcg
gacccgcaggcccagatgcagcagccccaggctccagcacctcccagcagtgcgcccagc
ttccagcctgcacacctccctgcagggcagatggtgctgcaggggggcttccagcctgct
gcccagcccctggggccatccaccatggcacccactgcttccaaacccagcacggagggg
gccccaggggcccccattggcaatgccatccagcatgtgcaggcactgccaacagagaag
atcaccaagaagcccatccctgaggagcaccttatcctgaagactacatttgaagctctc
atccagaggtgcctgctgtctgcctccgatccgcaaaccaagaggaaactggatgatgca
aataaacgcctggagtttctgtatgacaaacttagggaacagacactctctccaaccatc
attagtggcttgcacaacatcgtgaagagcatcgagacgcgcaactaccaggaggggctg
aacatccacacacacatcgtcagcaccagcaacttcagcgagacctctgctttcatgcca
gtcctcaaggttgtcctcacccaggccaacaagctgggggtgtga
DBGET
integrated database retrieval system
