Geospiza fortis (medium ground-finch): 102041130
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Entry
102041130 CDS
T03755
Symbol
PARP1
Name
(RefSeq) poly(ADP-ribose) polymerase 1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03410
Base excision repair
gfr04210
Apoptosis
gfr04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
102041130 (PARP1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
102041130 (PARP1)
04217 Necroptosis
102041130 (PARP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gfr03032
]
102041130 (PARP1)
03036 Chromosome and associated proteins [BR:
gfr03036
]
102041130 (PARP1)
03400 DNA repair and recombination proteins [BR:
gfr03400
]
102041130 (PARP1)
Enzymes [BR:
gfr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
102041130 (PARP1)
DNA replication proteins [BR:
gfr03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
102041130 (PARP1)
Chromosome and associated proteins [BR:
gfr03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
102041130 (PARP1)
DNA repair and recombination proteins [BR:
gfr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
102041130 (PARP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
ESF1
Motif
Other DBs
NCBI-GeneID:
102041130
NCBI-ProteinID:
XP_005427073
UniProt:
A0A6I9HP08
LinkDB
All DBs
Position
Un
AA seq
973 aa
AA seq
DB search
MFDGKVPHWHHYSCFWKRARLVSHADIDGFPELRWEDQEKIKKAIETGGPGGGKGGEQEG
GGKAEKSLNDFAAEYAKSNRSTCKGCEQKIEKGQIRISKKMVHPEKPQLGMIDNWYHPDC
FVSRRAELGFLPAYGATQLLGFSILKAEDKETLKKQLPATKSEGKRKGEEVDGNVTAKKK
QKKEKEKDSKQQKQLKEQTELIWGIKDELRKVCSTNDLKELLIANKQEVPSGENAILDRV
ADGMAFGALLPCEQCKGQFVFKSDAYYCSGDITAWTKCVAKTQTPNRKDWVIPKEFREIP
YLKKFKCKKQDRVFPPDAATVNSAPPPSASAPLSETVSAPRDKPLTNMKILIVGKLSKNK
EEVKSIVEDLGGKMTTTANKATLCISTQKDVEKMSKKMEEVKEAKVRVVSEAFLQDVKSS
SKDFQELVSLHALSPWGAEVKMEHEEMAVDGKNSKPPSTKSAGKVKEEQGPSKSEKKMKL
TVKGGAAVDPDSGLEDSAHVFEKGGKIFSATLGLVDIVKGTNSYYKLQLLEDDRENRYWV
FRSWGRVGTVIGSNKLEQMPSKEDAIEHFLNLYEEKTGNSWHSKNFTKYPKKFYPLEIDY
GQDEEAVRKLTVGAGTKSKLAKPIQDLIKMIFDVESMKKAMVEFEIDLQKMPLGKLSKRQ
IQSSYSVIFFGACCLVQAVSDSGSESQILDLSNRFYTLIPHDFGMKKPPLLNNLEYIQAK
VQMLDNLLDIEVAYSLLRGGNEDGDKDPIDINYEKLKTDIKVVDKDSEEAKIIKQYVKNT
HAATHNAYDLKVVDIFRIEREGESQRYKPFRQLHNRQLLWHGSRTTNFAGILSQGLRIAP
PEAPVTGYMFGKGIYFADMVSKSANYCHTSQADPIGLVLLGEVALGNMYELKNASHITKL
PKGKHSVKGLGKTAPDPTATTTLGGVEVPLGNGISTGINDTCLLYNEYIVYDVAQVNLKY
LLKLKFNYKTSLW
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatggcaaagtccctcactggcaccactacagctgcttctggaagcgggctcga
cttgtgtcccatgcagacattgacggcttccctgagcttcgctgggaagatcaggagaag
atcaagaaagccattgaaactggaggccctggaggaggaaaaggaggggaacaggaagga
ggtggtaaggctgagaagagcctaaatgactttgctgcagaatatgccaagtccaacaga
agtacttgcaaaggctgtgagcagaaaatagaaaagggccagatcaggatttccaagaag
atggtgcatcctgagaagcctcagctggggatgattgataactggtaccaccccgactgc
ttcgtgagccgccgggcagagctgggcttccttcctgcctacggggccacccagctcctg
ggcttcagcatcctgaaagctgaagataaagaaactctgaagaagcagctcccagctacc
aagagtgaaggaaagagaaaaggagaagaggtagatggaaacgtgactgcaaaaaagaag
cagaaaaaagaaaaagagaaagactcaaagcagcagaaacagctgaaggagcagacagag
ctgatctggggcatcaaggatgagctgaggaaggtgtgctccaccaatgacctgaaggag
ctgctgattgccaacaagcaggaggtcccctcaggggagaatgctatcttggacagagta
gcagatgggatggcctttggagctctgctgccctgcgagcagtgcaaggggcagtttgtg
ttcaagagtgacgcttattactgttctggggacatcactgcctggaccaagtgcgtggct
aaaacacagactcccaacaggaaagactgggtcatcccaaaggaattccgggaaattcct
tacctgaagaaatttaagtgtaagaagcaggacagggtgttccctccagatgctgccact
gtgaactcggcccctcctccctctgcatctgctcctttgtcagagactgtgtctgcaccc
agagacaaaccactgaccaacatgaagatcctgattgttgggaagctgtcaaagaacaag
gaggaggtgaaaagcatcgtggaggacctgggaggaaagatgaccacaacagccaacaag
gccacgctgtgcatcagcacccagaaggatgtggagaaaatgagcaagaagatggaagaa
gtgaaggaggccaaggtccgtgtggtctcggaggcgtttcttcaggatgtgaaatcttcc
agcaaggacttccaggagctcgtgtctctccatgccctttcaccctggggtgcagaggtg
aaaatggagcatgaggaaatggctgtggatgggaagaacagcaagcccccaagtacaaag
agtgctgggaaggtcaaagaagaacaaggacctagcaagtctgaaaagaaaatgaagtta
acagtgaagggtggagcagcagtagatcctgattctggtttggaggattctgctcatgtc
tttgaaaaaggtgggaaaattttcagtgcaaccctgggactagtagatattgtaaaagga
acaaattcctattataagctgcagctgctagaggatgacagagagaacaggtactgggtg
ttccgatcctggggccgtgtgggcactgtaattggcagtaacaagctggagcagatgcca
tcaaaagaagatgccattgaacacttcctgaatttgtatgaagagaaaactggcaattct
tggcattctaagaacttcactaaatatcccaaaaagttctacccgctggaaatagattat
ggacaggatgaagaagctgtcaggaaactgacagtaggtgctgggacaaaatcaaaactt
gctaagccaatccaggatcttattaagatgatctttgatgtggagagcatgaagaaagca
atggtggaatttgagattgacttgcagaagatgccattgggaaaactgagcaagcgacag
atccagagttcttactcagtaattttctttggtgcttgttgtcttgtccaggcagtttct
gacagtggttcagaatcccagattttggacctctccaaccgcttctatacactgattcct
catgactttgggatgaagaagcctcctctcctaaataacttggaatacattcaggctaaa
gtgcagatgttggacaacttgcttgatattgaggttgcttacagccttctcagaggtgga
aatgaagatggagataaagacccaattgacatcaactatgaaaaacttaaaacagatatt
aaggttgttgacaaagattcagaagaagccaagattatcaaacaatatgtgaagaacact
catgctgcaacacacaatgcatatgacctcaaagttgtggatatcttcaggattgagcga
gagggggagagccagcgctacaagcccttcaggcagctccacaaccgccagctgctgtgg
cacggctcccgcaccaccaacttcgctggcatcctctcgcagggcctgcggatagctccg
cctgaagctcctgtgactggctacatgtttgggaagggcatctattttgcagacatggtg
tccaagagtgcaaactactgtcacacatctcaagccgatcccataggtttagtactgctg
ggagaagtcgcccttggaaatatgtacgaactaaagaatgcttcccacatcacaaaattg
cccaagggaaaacacagtgtcaaaggtttgggcaaaactgctcctgatcccacagccacg
accacccttggtggtgtagaggttcccttagggaatgggatctccacaggaattaatgat
acctgtcttctgtataatgaatatattgtgtatgatgttgctcaggtaaatctgaagtac
ctgttgaaactgaaattcaactataagacatcactctggtga
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