Geospiza fortis (medium ground-finch): 102041156
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Entry
102041156 CDS
T03755
Symbol
SIX1
Name
(RefSeq) SIX homeobox 1
KO
K15614
homeobox protein SIX1
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gfr03000
]
102041156 (SIX1)
Transcription factors [BR:
gfr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
102041156 (SIX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
YdaS_toxin
HTH_72
Phage_mat-A
Motif
Other DBs
NCBI-GeneID:
102041156
NCBI-ProteinID:
XP_014167300
LinkDB
All DBs
Position
Un
AA seq
286 aa
AA seq
DB search
MCGDGPCERGWVSEMRVGATDAGGVRHPGNIERLGRFLWSLPACEHLHKNESVLKAKAVV
AFHRGNFRELYKILESHQFSAHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFP
LPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRR
QRDRAAEAKERENTENNNAATNKPNQLSPLDGSKPLMSSSEEEFSPPQSPDQNSVLLLQG
NLSHARSSGYSLSGLAASQTPHSLQGHQLQDSLLGPLTSSLVDLGS
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgtgcggggacggtccgtgcgagcgcgggtgggtgtcagagatgcgggtgggtgccacg
gatgcgggtggggtgcggcacccgggcaacatcgagcggctggggcggttcctctggtcc
ctccctgcctgcgagcacctccacaagaacgagagcgtcctgaaggccaaggcggtggtg
gccttccaccggggcaacttccgcgagctctacaagatcctggagagccaccagttctcg
gcgcacaaccaccccaagctgcagcagctctggctgaaggcgcactacgtggaagccgag
aagctgcggggcagacccttgggcgccgtcggcaaataccgcgtccgccgaaaattccct
ttgccccgcaccatctgggacggcgaggaaaccagctactgcttcaaggagaaatctcgg
ggcgtgctgcgggaatggtacgcccacaacccctacccgtccccccgggagaagcgggag
ctggcggaagccaccggtctcaccaccacccaggtcagcaactggttcaagaacagaagg
caacgggaccgagcggcggaggcaaaggaaagagagaacacggaaaacaacaacgcggct
accaacaaaccgaaccaactctcgcctctggatgggagcaaacccctcatgtccagctcc
gaggaagagttttctcctccccaaagcccggatcagaactcggtcctgctcttgcagggg
aacctcagccacgccaggagctccggctattccctgagcggcttagccgcatcccagacc
ccgcacagcctccaaggccaccagctccaggactcgctgctgggacccctcacgtccagc
ctggtggatctgggatcctaa
DBGET
integrated database retrieval system
