Geospiza fortis (medium ground-finch): 102041237
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Entry
102041237 CDS
T03755
Symbol
RXRG
Name
(RefSeq) retinoid X receptor gamma
KO
K08526
retinoid X receptor gamma
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03320
PPAR signaling pathway
gfr04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
102041237 (RXRG)
03320 PPAR signaling pathway
102041237 (RXRG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gfr03000
]
102041237 (RXRG)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
gfr03310
]
102041237 (RXRG)
Transcription factors [BR:
gfr03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
102041237 (RXRG)
Nuclear receptors [BR:
gfr03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
102041237 (RXRG)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
Motif
Other DBs
NCBI-GeneID:
102041237
NCBI-ProteinID:
XP_005426748
UniProt:
A0A6I9HP24
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Position
Un
AA seq
461 aa
AA seq
DB search
MYGNYPHFIKFPAGFGNSPVHASSTSVSLSSGLSTGSPVVEGPPGFLEPPGSAARALPAP
MSALGSPYRVIASSLGSHPVALSSAPGMNFVAHASPQLNVLNNVSSSEDVKPLPGLPGMG
NMNYPSTSPGSLAKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCL
IDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRSRERSETEAESTSSGSEDMPVERILEA
ELAVEPKTEAYSDMGTESSTNDPVTNICHAADKQLFTLVEWAKRIPHFSDLTLEDQVILL
RAGWNELLIASFSHRSVSVQDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMQ
MDKSELGCLRAIVLFNPDAKGLSSPSEVESLREKVYATLEAYTKQKYPEQPGRFAKLLLR
LPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLETPLQVT
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtatgggaattatcctcacttcattaagtttcctgcgggctttggcaattccccagtg
cacgccagctccacgtcggtgagcctgtcctcggggctctccacggggagcccggtggtg
gaggggccccccggcttcctggagccccccgggagcgcggcgcgggcgctgccggcgccc
atgagcgccctgggctcgccctacagggtcatcgcctcctcgctgggctcgcaccccgtc
gctctgtcctccgcccccggcatgaatttcgtggcccacgccagcccgcagctcaatgtc
ctgaacaatgtcagcagctcagaggatgtcaagcccttgccgggtctcccggggatgggg
aacatgaattatccatccacgagtccaggatccctagccaaacacatctgtgccatctgt
ggggacaggtcctcagggaagcactatggggtgtacagctgtgagggctgcaaaggcttc
ttcaagaggaccatcaggaaggatctgatctacacctgccgggataacaaggactgcctg
atcgacaagcgccagcgcaaccgctgccagtactgccgctaccagaagtgcctcgccatg
gggatgaagagggaagctgtgcaggaggagaggcagaggagcagggagcgcagtgagacc
gaggctgagtccacgagcagtggcagtgaggacatgcctgtggagaggatcctggaagct
gagctggcagtggagcccaaaacagaggcctacagtgacatgggcacagagagctcgaca
aatgaccctgtcaccaacatctgccacgctgctgacaagcagctcttcactctggtcgag
tgggccaagcgcatcccccacttctccgacctgacgctggaagaccaagtcattctcctc
cgggcaggctggaatgagctgctcattgcctctttctcccatcgctctgtgtcggtgcag
gatgggatcctgctggccacgggcctgcacgtgcaccgcagcagcgcccacagcgctggc
gtgggctccatctttgacagggttttgacagagctggtgtccaaaatgaaagacatgcag
atggataagtcagagctggggtgcctgcgagccattgtcctgtttaacccagatgccaag
ggtttgtccagcccctcagaagtggaatctctgcgggagaaggtctatgccacgctggaa
gcctacacgaagcagaagtaccccgagcagccagggcggtttgccaagctcctcctgcgc
ctgccggcactgcgctccatcgggctgaagtgcctggagcacctcttcttcttcaagctg
attggagacacccccatcgacacctttctcatggagatgctggagacacccctgcaggtc
acttga
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