Geospiza fortis (medium ground-finch): 102041280
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Entry
102041280 CDS
T03755
Symbol
SEC16A
Name
(RefSeq) SEC16 homolog A, endoplasmic reticulum export factor
KO
K20353
COPII coat assembly protein SEC16
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gfr04131
]
102041280 (SEC16A)
Membrane trafficking [BR:
gfr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
102041280 (SEC16A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
102041280
NCBI-ProteinID:
XP_014162584
LinkDB
All DBs
Position
Un
AA seq
2352 aa
AA seq
DB search
APVQPLTDPFAFGRQTPQGSPLDHPPKGSAPAAFPQPARAGDSPHGPHTSLPAPVAQAGI
GTSSFPNVPVPSPSSGYVINSAAEGHPNADVGLRGPAAPLHYNPGAAVENSFSVHPGAVS
AANKPGARQDVGRDPNDAASAPNTAALFPPPPQQPGPQWRPVPGNLQSPVRNFVPYPEPS
PQTDVHNISQPSVSTSHPPPHTNVPQGPGHQGIPQNIVQAPLPAGCEKNGKNGPANSSHH
MNSIQPGNVFRQNTDMTNPWSNQPYQEQFYPQPPLQDSGFVLPTAQENNPKNQSPAMSET
SNRFIPTDRDPGTLSMFFKGDEAENEEILSSEKKYVMEKTEFDACQQNSASLYHQPVHPQ
QVATNILSQAQLGAAGEMVQKGMDAQYFPKLVSHQEAQAAKHSLFAGDDKAQIGDPAAGS
QYENVENLECIQNQEVLPSEPQNINASSPAAGPDPYRYGSFPGQVLPKNAVSHAEGGPNL
EAPDSLPHPGRPDSVSSNYSSISHRSTSSSARPPEQVGTFIQQEIGKPDEESSASFFKQI
DSSPLGGDSGELNLSKNYHGNLSQPPTPSPPKPTGVFQTSANSSFEPVRSHGVGIKPAEI
DQAKMVVELRENHSNQKNIKKNTAVPAASPGNLEQPPDNLETIYMPQVHPGAGEAGNTLH
SGPVVENIQSVSERRSSTRAQGAVKKCDSPATTLWAHNELPNFGGNVLLAPAAPAVYVPA
KQTVEVIQPPEEGLSNQQPCKPGTIAVQHSQDGNIAFENLENPPKMGEEEALQSQASSGY
ASLLSSPPTESLQNQPILIAQPNQSYNLAQPINFSISLSNQLSNNENNQPMKDSGVGDKP
AMGPQSSHAGGENMPLPVMQVGSLLVNALPNTNLLKHNLLQSPVNSSDAASNQPANLLMK
TPLNLTPEGQKNVNVEGLVPEFASKPGSNSSASPGTNLPSGSASGLVPAVNSIAQANNSA
NQSSSKEASGVLDFTVPRTLEKSSTSNSVQVHNQSPSGAPVQQAAGAGQVRPEVPDKQHF
YQQVTKDVQHQAAADRAAQGVLPPQPQMQAAQMQPPTSGQSSVPADSQISTGAKAMQQGD
SQVLGNRPQPGGPQEAGSAQPRYDQTSLGKQPVSEQPPGAPAATAPPASTAQAVPPNGQQ
DLQRPPPPQTPQEAFGPPQNPYYYYRHPYDAYQAPYPPPYPPADPRTAAHLYYMEDSYGQ
YDPRYRHYESSAAYMEPGSYRYPEPERPSSRASHCSDRPASRQGYTEDYYGKGGWSDYYS
GYYPNSYDYGDPSRWERYPYDPRYRDPRSYDQRYWYDAEHNPYQKREAYPYGSRTERYED
NWRYDPRFTGSFDDEAEPARDPYGDEFERRSVHSEHSGHSLRSSRSVHSHHSSFSSRSQQ
SQLYRSNHDLTAYEPPAQAVHADYPYGGYEPSFDGQQPFPDYGYPAETAWSAVEQAPLRP
STPEKFSVPHICARFGPGGFLIKALPNLPSEGQPALVEIHSMETMLQHSPEQEEMRAFPG
PLAKDETHKVDVINFAQSKAAQCFKNENLIDKESASLLWDFIVLLCRQNGTVVGTDLAEL
LLRDHKTVWLPGKSPNEANLIDFNNEALEQVEEESGEAQLSFLTDNLVTTVDSFEKETER
FRELLLYGRKKDALESAMKHGLWGHALLLASKMDSRTHARVMTRFANSLPINDPLQTVYQ
LMSGRMPAASTCCGDEKWGDWRPHLAMVLSNLTNNVDLESRTIATMGDTLASKGLLDAAH
FCYLMAQVGFGVYTRKTTKLVLIGSNHSLPFLKFATNEAIQRTEAYEYAQSLGSQPGCLP
NFQVFKFIYACRLAEMGLAAQAFHYCEVISRTVLKDPHYYSPVLIGQLIQMSSQLRLFDP
QIKEKPDQESFIEPPWLVTLRHVDGQIKEGAIAYNTDRSTPPPYECSTPSSELDRASQCD
GGGGRDVGPGAENALLASLLPNMAQQMQSVQLMPSVPQAVLDGSAAMLPPGDQGSVPFYP
VAPQPLGPGPGFAPQGFSNPYGTEPSPLYLGTALPPGGPPQEIEPQPEEQTNLETGMQRI
APESPSQNSFPEQREDDFYGRMANMGYGRRSRTTSESSAHSVGRERSNSAAKQPSPPPSA
PAAKDTKKETKKEAAPRKTGGTWFRWLMGKGKNEAHLPDDKNKSIVWDEQKQRWVNLDEP
EEESKPPPPPPTGFPKAAQAAPPGPGGPPGASVNVFSRRAAGSRARYVDVLNPGGTKASG
AVPAPSDLFAPLAPMPIPANVFVPNSVPGESQPMEGSGAAEHTAAANQTNTDPAAAVEPE
YLNPAALPPGSGLPVPNPDGSQSGEPAAVPPSGAPSAGAVPFYNPSQFAQSPAATGSSRL
GRIGQRKYPTLK
NT seq
7059 nt
NT seq
+upstream
nt +downstream
nt
gcgccggtgcagcccttgacagacccgtttgccttcggcaggcaaaccccgcagggctcc
cccttggatcacccgcccaagggcagcgctccggcagcgttcccgcagcccgcccgcgcc
ggggacagcccgcatggaccacacacctctctgccagctcctgtggctcaggcagggata
ggcaccagtagctttcccaatgttccagttccttctccgtcctcggggtatgttataaac
agtgctgcagaagggcatcccaatgctgatgttggactccgtgggcctgcagcgcccttg
cattataacccaggagcagcagtggaaaattctttcagtgtgcatcctggagcggtgtct
gcagcgaacaaacctggagctagacaggatgttggcagagatccaaatgatgcagcttca
gcacccaacacggcagcactcttcccaccacctccccagcagcctgggccccagtggagg
cctgtcccaggcaatctgcagtctccagttcggaattttgtgccctatcctgagccgtct
cctcagactgacgttcataacatttctcagccttccgtcagcacttctcaccctcctcca
cacacaaatgtcccacagggccctgggcaccaaggaattccacaaaacatcgtgcaagcg
cctttacccgctggttgtgagaagaatggcaaaaatggccctgcaaacagcagtcatcac
atgaacagcatccagcctggaaatgtgtttaggcagaacacagacatgactaacccttgg
tcaaaccaaccttaccaggaacagttttacccacagccacctttgcaagactccggtttt
gtccttcccacagctcaggaaaacaaccccaaaaaccagtctccagctatgtctgaaacg
tcaaatagatttattcccacagatcgagatccaggaactctctccatgtttttcaaaggg
gatgaggcagaaaatgaagaaatactttcatctgaaaaaaaatacgtaatggagaaaaca
gagtttgatgcctgtcagcaaaattcagcctccctgtatcaccagcctgtgcatcctcag
caggtggcaaccaatattctctctcaggcacagctgggtgcagctggtgagatggtacag
aaaggaatggatgcccagtacttccctaaacttgtcagccatcaggaggcacaggctgct
aagcactctctgtttgctggtgatgacaaggcacagataggtgacccagctgctgggtcc
cagtacgaaaatgtggagaacctggagtgcattcagaatcaggaggtgctgccaagtgaa
ccccagaacatcaacgcttcctcccctgctgctggtcccgatccgtacaggtacggatcc
ttcccgggtcaggtgcttcccaagaatgctgtgagccatgctgaaggaggaccaaacctg
gaggcacctgactctttacctcaccctggccgaccagacagcgtctcttccaactacagc
agcatcagccacaggagcacttccagctctgcacggcccccggagcaagtcggtacattt
atccagcaggaaattgggaagcctgatgaggaatcctctgccagcttcttcaaacagatt
gactcctctcctctgggaggtgattcaggtgagctaaacctcagcaagaactaccatggc
aatctatcccagcctcccactccaagtcctcctaagcctacaggagtgtttcagacaagt
gcaaatagttcttttgaacctgtgaggtcccatggagttggtataaaacctgcagagatt
gaccaagcaaagatggtggttgaattaagagagaaccactcaaaccaaaagaatatcaag
aagaacacagcagtgcctgctgcatcccctggcaatcttgaacagccaccagataatctg
gaaacaatttacatgcctcaggtacacccaggcgctggggaggctggaaacacgctgcac
tctggacctgttgtggaaaatatacaatcagtatctgagagacgctcctcaactagagct
cagggagcagttaagaagtgtgatagcccagcaacaactttatgggctcacaatgagtta
ccaaattttgggggaaatgttctcctagctcctgctgctcctgcagtgtatgtgcctgcc
aaacagactgtggaagtcattcagccaccagaagaaggcctgtctaatcagcagccatgt
aaaccagggactattgctgtgcagcactcccaggatggaaatatagcttttgaaaatctt
gagaaccctcccaaaatgggagaagaagaagcacttcagtctcaggcaagttctggttat
gcaagtttattgtcttctccacctacagagtctttgcaaaatcagcctatcctgattgct
cagcctaatcaaagctataacttggctcagccaattaatttttctatttctctatctaat
cagctaagcaacaatgaaaacaatcagccaatgaaggactctggagttggggacaagcct
gcgatgggtccccaaagttcacatgctggcggggaaaacatgccgttacctgtgatgcaa
gttggatctctcttagttaatgcacttccaaatactaatctgttaaaacataatttatta
caaagtcctgttaattcttctgatgctgcttctaatcagcctgcaaacttgcttatgaaa
acgcctcttaatttgactccagaagggcaaaagaatgttaatgtggaaggccttgttcct
gaatttgctagcaagccagggtctaactcatctgcttctcctgggacaaatcttcccagt
ggaagtgcaagtggcctggtccccgctgttaattccatagcacaggctaataattctgca
aatcaatcaagtagcaaagaagcttctggagtgctggacttcacagtgccacggacgttg
gagaaaagcagcacaagtaattctgtccaggtgcacaatcagtcaccctctggtgcccca
gtccaacaggcagctggtgctggtcaggtgcgtcccgaggtgcctgacaaacaacatttc
taccaacaggtgacgaaagatgtgcagcaccaggctgcagcagaccgagctgcacaggga
gtgctgccaccccagccacaaatgcaagcagctcaaatgcagccaccaacatctgggcag
tcctcagttcctgcagactcccagatttccacaggggctaaggccatgcagcagggggac
agccaggtgctgggtaaccgtccccagcctggggggccccaagaggcaggttcagcccag
ccaaggtacgaccagacgagtctcgggaagcaaccggtgtcagaacagcctccaggtgct
ccagcagccacagcccctcctgccagcactgctcaggcagtgccacccaacgggcagcaa
gacctgcagcgtccaccccctcctcagacccctcaggaagcctttggtccaccccagaac
ccttactactactacagacatccttacgatgcttaccaggccccatatccaccaccttac
cctcctgcagaccccaggacagcagctcacctttattacatggaggacagctacgggcag
tacgacccccggtaccggcactacgagagcagcgctgcctacatggagcccggcagttac
cgctaccccgagcccgagcggcccagctccagggccagccactgctctgacagacctgcc
tccaggcaagggtatacagaagattattatggaaaaggtggatggagtgattattattca
ggctattacccaaactcctacgattatggagatccaagtcgctgggaacgatacccatat
gaccccaggtacagagacccgaggagttatgaccagaggtactggtatgatgctgagcac
aacccttaccagaagagagaagcatatccatatggcagcaggaccgagcgatacgaggat
aactggaggtacgacccccgtttcaccgggagctttgacgacgaggcggagccggcgcgg
gatccctacggggacgagtttgagcggcgcagcgtgcacagcgagcactcggggcacagc
ctgcgcagctcccgcagcgtgcacagccaccacagcagcttcagctcccgctcccagcag
agccagctgtacaggagcaatcatgatctcactgcctacgaaccccctgcacaggcagtg
cacgcagattatccctacggagggtatgagcccagctttgatggacagcagcccttccca
gactatggctaccctgctgaaacagcctggtcagctgtggaacaagcacctttaagaccc
tcaacacctgagaaattttcagtgcctcatatctgtgccaggtttgggcctggtggcttc
ttaataaaagcactgccaaacctgccttctgagggtcagccagctctggttgaaatccac
agcatggagactatgttacaacattctccagagcaagaagagatgagagcctttcctggt
cctcttgctaaggatgagacccataaagtggatgttattaattttgcacaaagtaaagct
gcacagtgctttaagaatgaaaatttaattgacaaagaatctgcaagtcttctttgggac
ttcattgtactgttgtgcaggcagaatgggactgttgtgggaacagacctggctgaactt
ctgctccgagatcacaaaacagtgtggcttcctgggaagtcccctaatgaggcaaatttg
attgatttcaataatgaggctttggaacaagtggaagaggaatctggtgaagcccagctc
tcgtttctcactgataatcttgtaaccacagttgacagttttgagaaggagactgagaga
ttcagggagctgctgctttatggccgtaagaaagatgctttggagtctgccatgaagcat
ggtttgtggggtcatgctctgctccttgccagcaaaatggacagcaggacacatgcaaga
gtgatgaccagatttgccaacagtctcccaattaatgaccctctgcagactgtttaccag
ctcatgtctgggaggatgccagctgcatccacgtgctgtggagatgagaaatggggagac
tggaggcctcatctagcaatggtgttatccaacttgaccaataacgtggacttggaatcc
aggaccattgcaaccatgggagacactcttgcttctaaaggcctgctggatgctgctcat
ttttgttaccttatggcccaagttgggtttggagtttacacaaggaagacaacaaagctt
gtcctaattggatcaaatcacagcttgccatttttaaagtttgccaccaatgaagccatt
caaagaacagaagcctatgagtatgcacagtcactaggaagtcagcctggctgcttgccc
aatttccaggttttcaagttcatctatgcctgtcggctggctgagatgggccttgctgcc
caggctttccactactgtgaagtgatttccagaactgtcctcaaagatccacattactat
tcccctgtgctgattggccagctaatccagatgtcatcccagctgcgcctgtttgaccct
cagattaaagaaaaaccagatcaggaatcttttattgaacccccctggttagtgacactt
cgacatgtggatggacagatcaaggagggtgcaatagcctataacacagacagatccact
ccccctccctatgaatgcagcactcccagctctgagctggaccgtgccagtcagtgtgat
gggggaggaggccgtgacgtggggccaggtgctgaaaatgccttgctggcatccttgtta
cccaatatggctcaacagatgcagagcgtgcagctgatgccttcagtacctcaggctgtc
cttgatggctcagctgccatgcttcctcctggtgaccagggaagtgtccccttctaccca
gtggctcctcagcctcttggcccaggacctggctttgcacctcaaggattttcaaatcca
tatggaactgaaccatccccactgtatttagggacagcactacccccaggagggccacca
caagaaatagaaccacagccagaagagcagacaaacctggaaacaggaatgcagagaatt
gccccagagtctccttcacaaaactccttccctgagcagagagaggatgatttctatggc
aggatggctaacatgggctatgggcgaaggtcccgaacaacctcagagtcctctgctcat
tctgtgggacgagagagatccaactctgcagcaaagcaaccctctcctcctccctctgct
cctgcagctaaagacactaaaaaagaaacaaaaaaggaggcagcacccagaaagactggt
ggaacctggtttcgctggctgatgggaaaaggaaagaatgaggctcacctgccagatgac
aagaataaatcaattgtttgggatgagcagaaacaacgttgggttaatctggatgaacca
gaagaagagagtaaacctcctccaccacctccaacaggatttcctaaagctgctcaggct
gctccccctgggcctggaggcccacctggtgcctctgtcaatgtgttctccaggagagca
gctggaagcagagcccgttatgtggatgtcctgaatccaggaggaaccaaggcaagtggt
gctgttcctgcaccatcagacctgtttgcccccctggcacccatgcccattcctgccaac
gtgtttgttccaaactcagttccaggggaatcccagcccatggaggggagtggagcagca
gagcacacagcagctgcaaaccaaaccaacacagaccctgctgcagctgtggaaccagag
tacttaaaccctgcagcccttcctcctggatctggacttcctgttcctaaccctgatggc
tctcagtcaggcgagcctgctgctgttccaccctcgggggcaccttcagcaggggcagta
ccgttctacaacccctctcaatttgcacaatctcctgctgccactggaagttcaagactg
ggaagaattggacagaggaagtatccaacactgaagtag
DBGET
integrated database retrieval system
