Geospiza fortis (medium ground-finch): 102041374
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Entry
102041374 CDS
T03755
Name
(RefSeq) collagen alpha-1(XXVIII) chain-like
KO
K23619
collagen type XXVIII alpha
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gfr01002
]
102041374
Peptidases and inhibitors [BR:
gfr01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
102041374
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
VWA_3
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
102041374
NCBI-ProteinID:
XP_005416143
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All DBs
Position
Un
AA seq
1256 aa
AA seq
DB search
MFLRFWWLLWILEHNEILAENLREEKIYGLRRLKPKHILSNIVEKYPSSSDQDEDCILEI
AFLLDSSESAKDYNHEQQKRFVLQTVDRMKSLQLSSGRTLRWRMALLQYSSTVFIEQAFH
DWKGPEAFKSHIAPITHIGHGTYTTYAITNLTQLYMSEGTLGSVKVAVLFTDGVDHPRNP
DIFAAAADAKHQGIVFFTMGMTRVAEEVSNAAKLRLLASVPASRFVFNLQEKGTVEKVLK
EMKDLSEEECPQVDTCNCEKGERGLPGPAGKKGRTGDDGAPGLKGAKGDPGLNGIPGRDG
IEGKSGYKGEKGERGECGIPGIKGERGPEGPVGPRGVRGIQGLPGQSGDQGPEGLQGSKG
ERGLPGPPGLPGEIGIGLPGPKGDTGLTGRPGPVGPPGVGEPGFMGPQGPQGVQGERGSP
GEGLPGAKGDRGFDGPKGPRGLPGISIKGEKGECGPPGLPGSVGLPGIGIQGEKGVEGPK
GPPGSRGLPGQGIPGPKGEQGLPGETGVPGERGIGEPGSKGDPGPSGLAGLPGLPGEDGA
PGQKGEPGLPGLRGPEGAPGIGIQGEKGDQGQRGIRGLTGPTGMLGPVGANGEPGAPGRL
GMPGPPGRSVPGPKGDIGLPGLAGPIGEPGFGLPGAKGDQGLPGPPGPFGQKGDGYPGPP
GLPGLPGIPGEQGPDGVGLPGPKGDPGSRGPVGPAGPPGKGLPGPKGSIGRPGPPGSLGP
PGEGIQGTKGEQGIQGMPGPRGPPGDGLLGEKGDRGATGDKGKKGEKGDVGDPGLSGEPG
KTGPKGDQGLTREDIIKLIKEICGCSIKCKEIPMELVFVIDSSESVGPENFEIIKDFVTA
LVDRVTVGRNATRIGLVLYSLEVQLEFGLNKYPTRQDVKQAIRKMQYMGEGTYTGTAIRK
ATQEGFSGARAGVRKVAIVLTDGQTDKREAVKLDLVVREAHAANIEMYAIGIVNTSDPTQ
AEFVRELNLIASDPDGEHMYLIDDFNTLPVLESKLVNQFCEDEHGTLLYNHNENGASISG
RSFQTVSPSFLHYILQKNNVNRQSLPAQTLRVSTVESPLSLGHLPQPSAPTNVPPVVYDA
YEEEQDEEQPTVLTGNTRAVLPLLSSKQPPSNKVMTPSLSTAGPTPRPESPVELRCKLRL
DQGPCHVYTIRWYYDKQANACAQFWYGGCHGNANRFESEQECRQACVFFSGANGNVKHIN
KKWSLASTKTPSPFVLSERSAPLLTEGGRGISRPPAALFHPACVHFRMGATGSSPT
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgttcctcagattctggtggcttttgtggatacttgaacataatgagattttagcagaa
aatctcagggaagagaagatatatggattgagaagattaaaacctaaacacattctgtca
aatattgtagaaaaatatcccagctcaagtgatcaagatgaagattgcattctggaaatt
gcttttttactggacagctccgaaagtgctaaggactataatcatgaacaacagaaaaga
tttgtactgcaaacagtagacagaatgaaaagtctgcagcttagttctggacgtaccctg
cgctggaggatggccttacttcagtacagcagcactgttttcatagagcaggctttccat
gactggaaaggtcctgaagcattcaaatcccacattgctcccatcacccacataggtcat
ggcacctacacaacttatgctataactaatctcacccagctctacatgtctgaagggact
ttgggtagtgtcaaagtagctgtgcttttcactgatggagtggatcatccaagaaaccca
gacatttttgcagctgcagctgatgctaaacaccaaggaattgtatttttcacaatggga
atgaccagagtggctgaggaggttagcaatgctgccaagctccggctcctggccagtgtc
ccagcatccaggttcgttttcaacctccaggagaaaggaactgtggagaaggttctcaaa
gaaatgaaagacctgtctgaggaagagtgtccccaggttgacacatgtaactgtgagaag
ggggaaagaggccttcctggtcctgctggtaaaaagggtcgcactggggatgatggagct
cccggcctgaaaggagcaaagggggacccaggtcttaatggaatcccaggacgagatgga
atagaggggaaatctggatataaaggagagaagggggaaagaggtgaatgtggaatccca
ggaataaaaggagaaagaggccctgaaggtccagtaggccccagaggagtaagagggata
cagggtctgccaggacaatctggagatcaagggcctgaaggcctgcaaggatcaaagggt
gaaagaggtctccctgggcctcctggcttgcctggagagattggaataggactgccaggc
ccaaagggtgacactggtttgacaggaagaccaggccctgttggcccacctggagttggt
gagccaggatttatgggacctcaaggaccacaaggtgttcaaggagaaagaggctcacca
ggagaagggcttccaggagcaaagggagatcgtggctttgatggaccaaaaggccctcgt
ggacttccaggcatcagcataaaaggtgaaaagggcgagtgtggtccccctggtttacca
ggatcagttggattacctggaattggaattcaaggagaaaagggagtggagggcccaaaa
ggaccacctggctctagaggactaccaggacaggggatacctggaccaaagggtgaacaa
ggcttgccaggagagactggagtgccaggagaaagaggtattggagaacctggttctaag
ggtgatccagggccttcaggactggcgggtctgcctggtcttccaggagaagatggagcc
cctggacaaaagggtgaaccagggttgcctggtcttagaggtcctgaaggtgctccaggg
attggaatacagggggaaaagggagatcaaggacagagaggaatacgtggattaacagga
ccaacaggaatgcttggacctgtaggagctaatggggagcctggtgcaccaggacgtctt
ggaatgccaggccctcctggaagatctgtgcctggaccaaagggtgacattgggttacct
ggtcttgctggaccaattggagaaccaggttttgggcttcctggggcaaagggtgaccaa
ggccttccaggaccccctgggccctttgggcaaaaaggagatggttatcccggcccacct
ggcttaccaggccttcctgggattcccggtgaacaaggaccagatggagttggactacca
ggacctaagggtgatcctggtagtagaggaccagtaggccctgccggtcccccaggaaaa
ggcttgccaggaccaaaaggaagcataggacgcccaggaccacctggctctctgggacct
cctggtgaaggtattcaaggaactaagggggaacaaggtattcaaggaatgccaggacca
cgaggcccccctggagatgggcttctgggagagaagggagatcgaggagctacaggtgac
aaggggaaaaaaggagaaaaaggtgatgtgggtgaccctggtttatctggagaacctggc
aaaaccggaccaaagggagaccaaggcctaacaagagaagatataattaaattaattaaa
gagatatgtggctgcagtattaaatgcaaggaaattcccatggagcttgtatttgtgatt
gacagctctgagagtgtgggaccagaaaattttgagattatcaaagactttgtaactgct
ttagtagacagagtaactgtaggcagaaatgctaccagaattggccttgtgctgtacagt
ttagaagttcagctagaatttggtctcaacaagtatccaacccgccaggatgttaagcaa
gcaattagaaaaatgcaatacatgggagaaggcacttatacaggaactgctatccgcaaa
gcaacccaggaaggattttctggtgctcgagcaggggtgaggaaagtagctattgtgcta
acagatggccaaacagacaagagagaagctgtaaaactagatcttgttgttcgagaggcc
cacgcagcaaacatcgaaatgtacgcaataggaatcgtcaatacttcagatccaacacag
gctgagtttgtgcgggagctcaatctgattgcttcagacccagatggagagcacatgtac
ctcattgatgactttaacaccctcccagttctggagtccaaattagtcaatcaattttgt
gaagatgaacatggcaccttactatacaaccataatgaaaatggtgcaagtataagtggg
cgatccttccagacagtatctccaagttttttacattacatacttcagaagaacaatgtt
aacagacaatcacttccagcacagacactcagagtatctacagtagaaagtcctctgagt
cttggccatcttcctcaaccatcagctccgaccaacgtacctcctgtagtctatgacgcc
tacgaagaggaacaagatgaagaacagccaaccgtgctgacaggaaatactagagctgtg
ttaccgttattgtcatctaaacaaccaccatccaataaagtgatgacaccatctctttca
actgcaggacccacaccaagacctgaaagtcctgtggagctgcgctgcaagctaaggctg
gaccaagggccatgccatgtttacacaatcagatggtattatgacaaacaagccaatgcc
tgtgctcagttttggtatggtggctgccatggaaatgcaaaccgctttgagtctgaacag
gaatgcagacaggcctgtgtatttttttctggagcaaatggtaacgtcaagcatatcaac
aaaaagtggagtttggcctcaactaaaacaccgtccccctttgtgctctcggaacgctca
gcccctctcctcacggagggaggtcggggcatttcccgcccgcccgctgctttatttcat
ccagcttgtgtccatttccgaatgggtgcaacgggctcctcgccaacctag
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