Geospiza fortis (medium ground-finch): 102041527
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Entry
102041527 CDS
T03755
Symbol
USP38
Name
(RefSeq) ubiquitin specific peptidase 38
KO
K11854
ubiquitin carboxyl-terminal hydrolase 35/38 [EC:
3.4.19.12
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gfr01002
]
102041527 (USP38)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gfr04121
]
102041527 (USP38)
Enzymes [BR:
gfr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
102041527 (USP38)
Peptidases and inhibitors [BR:
gfr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
102041527 (USP38)
Ubiquitin system [BR:
gfr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
102041527 (USP38)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Usp38-like_N
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
102041527
NCBI-ProteinID:
XP_014165280
UniProt:
A0A8N5EVK5
LinkDB
All DBs
Position
Un
AA seq
787 aa
AA seq
DB search
MITVLIRSLTTDPNVKDTSMTQALCRMIDWLSWPLAQHVETWVIALLKGLAAVQKFTILI
DVTLLKIELVFNRLWFPLVRPGALAVLSHMLLSFQHSPEAFHLIVPHVVSLVHSFKRDGL
PSSTAFLMQLTELIHCMMYHYSGFPELYEPILEAIKDMPKPTEEKIKLILSQSAWTSQSS
SLPSCLSRLSGKSETGKTGLINLGNTCYMNSVIQALFMATDFRRHVLSLNLNGCNSLMRK
LQHLFAFLAHTQREAYAPRIFFEASRPPWFTPRSQQDCSEYLRFLLDRLHEEERTLKALS
SARSSESIMTDKSQAQETAHKTFTEAPCMESEERTLIEKMFGGKLKTNICCLNCKSMSQK
EEAFTDLSLAFCPPASLENADSKCIEHSEVKDDYMVQSNTSATSSDAETPLSNLEVNRGC
DTIMNEGTIDFSSEPSSENTAISELKVENNGDMSQSLVGKNTLSVTDLLNYFLAPEILSG
DNKYYCEKCASLQNAEKTMQIIEEPEYLILTLLRFSYDPKCHIRRKILDNVSLPLVLELP
VKRATSPLAVVSGGWSVGVEISDTGENLAKKLKPSGADEVTCPQLVPYVLSSVVVHSGVS
SESGHYYSYARNVTGSGPSGLCHQSTALSLVSPQDKLFTEERPCTVVENELDTEMPREWF
LFNDSRVTFTSFQSVQKITSRFPKDTAYVLFYKKQNSTCGLNTNPANDLWVNGDPPLQKD
LMDAITKDNKLYLQEQELSARTQALQAASASCSFRPNGFDDNDPPGSCGPTGGGGGGGFS
TVGRLVF
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgattacagtactcatcaggagccttactacagatcctaacgtgaaagatacaagtatg
actcaagctctgtgcagaatgattgactggctgtcctggcctttggctcagcacgtggaa
acgtgggtgattgcactgctgaaaggattggctgcagtccagaaatttaccatcctcatt
gatgtcaccctgcttaagatcgagttggtgtttaatcgactttggtttcctctagtgagg
cctggtgcccttgctgtcctttcccacatgttacttagtttccagcattctccagaagct
tttcatttgattgtcccacatgtggtcagtttggttcactccttcaagagagatggcttg
ccttccagtacagcttttttgatgcagttgactgagttgatacactgtatgatgtatcat
tattcaggttttccagagctctatgaacccattctggaagctattaaggacatgcccaaa
cccactgaagagaagattaagttgatcctcagtcagagtgcctggacttctcaatccagt
tctttgccatcttgtttatctagactttctggaaaatctgaaactgggaagacaggccta
ataaatctaggaaatacttgctacatgaacagtgttattcaagcactttttatggctaca
gatttcagaagacatgttttatctctgaatctaaatggctgtaattccctaatgagaaaa
ttacagcatctttttgcatttttggcccatacccagagggaggcatatgctcctagaatt
ttctttgaagcttccagaccgccatggttcactcctcgatcccagcaggattgttcggaa
tatctcagattcctgctagacaggttgcatgaagaagagagaactttgaaagcattgtct
tcagccaggagttctgaaagtattatgactgacaagtcccaggcacaagaaactgcccat
aaaacatttactgaagcaccttgtatggaaagtgaagagagaactctgatagagaagatg
tttggaggaaaattgaagactaacatatgctgtttgaactgcaaaagtatgtctcaaaag
gaagaagctttcacagatctctctttggctttctgtcccccagcttccttagaaaatgct
gactcaaaatgcatagaacattctgaagtgaaagatgactacatggtgcaaagtaatact
tcagctaccagttctgatgcagaaacacctctcagtaatttggaagtaaatcgtggatgt
gacacaataatgaatgaaggaaccatagatttttctagtgagccaagctctgagaatacc
gcaatttctgaactcaaagttgaaaataatggggatatgtctcagagtctagtaggtaaa
aataccctgtcagttacagacttactcaattattttctggcacctgaaattcttagtgga
gacaacaaatattattgtgagaagtgtgcctctttacagaatgctgaaaaaactatgcaa
atcattgaggaacctgaatacctcattctcactcttttgagattttcatatgatccaaaa
tgtcacataaggcgcaaaatcttggacaatgtttctctaccacttgtattggaactgcca
gtgaaaagagcaacatcccctttagctgttgtttcaggaggctggtctgttggtgtggag
atttctgatactggagaaaaccttgctaaaaaactgaagccctctggtgctgatgaagtg
acctgcccacaattggtgccctatgtgttgagctctgtggtggtgcattctggtgtatcc
tctgaaagtggacattattattcgtatgctagaaatgttactggatcaggaccttcaggg
ctctgccaccagtctacagctctttctttagtttctcctcaggataagttgtttacagag
gagagaccttgtactgttgtagagaatgagctggacactgagatgccaagagaatggttt
ctgttcaatgacagcagagtgacatttacctcatttcagtcagtccagaaaatcaccagt
agatttccaaaggacactgcttatgttctgttttacaaaaagcagaacagcacctgtggc
ttaaacaccaatccagcaaatgacctgtgggtaaatggagaccctcctctacaaaaagac
ctcatggatgctattacaaaagataacaaactgtacttgcaggagcaagagcttagtgct
cgaacacaagcacttcaagctgcctcggcctcttgctctttccgacccaatggatttgat
gacaatgatcccccgggaagttgtgggcccacaggtggaggaggagggggtgggttcagt
acggttggtagattagtcttttga
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integrated database retrieval system
