Geospiza fortis (medium ground-finch): 102041602
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Entry
102041602 CDS
T03755
Symbol
RAB3GAP1
Name
(RefSeq) RAB3 GTPase activating protein catalytic subunit 1
KO
K18270
Rab3 GTPase-activating protein catalytic subunit
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gfr04131
]
102041602 (RAB3GAP1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gfr04147
]
102041602 (RAB3GAP1)
Membrane trafficking [BR:
gfr04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
102041602 (RAB3GAP1)
Exosome [BR:
gfr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102041602 (RAB3GAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rab3-GAP_cat_C
Rab3-GTPase_cat
DUF7380
Motif
Other DBs
NCBI-GeneID:
102041602
NCBI-ProteinID:
XP_014167860
LinkDB
All DBs
Position
Un
AA seq
1008 aa
AA seq
DB search
MFRKKAESYKSYLVLQQRKLKEAQQPKGKLESIFSSQLPSFAAQRGIRQFISKIEEVLND
WKLIGISSGKPLEKGIFTTGTWEEKSDEISFADFKFSVTHHYLVQEPSDKDGKEELGEDA
LPLPMQDLLCMNNDFPPRAHCLVRWYGLREFVVIAPAANNDAVISESKCNLLLSSISIAL
GNTGCQVPLFVQIHHKWRRMYVGECQGPGVRTDFEMVHLRKVPSQYTHLSGLLDIFKTKI
GCPLTPLPPVSMAIRLTFVLQDWQQYFWPQQPPDIDALVGGEVGGLEFGKLPFGACEDPI
SELHLATTWPHLAEGIIVDNDVYSDLDPLQAPQWSVRVRKADNPQCLLGDFLTEFFKLCR
RKESTDEILGRSAFDEEGKEVADITHALSKLTEPAPVPIPKLSVTNMVHSAKKKIRKHRG
VDESPLNNDVLNTILLFLFPDAADKLADVFENXASTSARNNPPPENEDYNLFSQFKSAPS
DSLTYKLALCLCMINFYHGGVKGVAHLWQEFVLEMRYRWENNYLIPGLANGAPDLRCCLL
HQKLQMLNCCIERKKARDEGKRGSMSDRSPGGASGDGAKGGDHSGDNPDKEKEFGKSWES
WSDSEEEFFECLSDTEDLKGNGQENGKKGPKESVNLKPEGRLHPHGKLMLLHPGEPLYVP
ITQEPAPMTEDLLEEQSEVLAKLGTSAEGAHLRARMQSACLLSDMESFKAANPGCCLEDF
VRWYSPRDYIEEEVIDEKGNKVIRGELSARMKIPSNMWVEAWETAKPVPARRQKRLFDDT
REAEKVLHYLAVQKPADLARHLLPCIIHAAVLKVKEEEAVEDISSVKKIIKQIISHSSKV
LRFPSPEDKKLEEIIAQIMSVEAIIARARSLKAKFGVEKCENEEEKEDLQRFVNSLLEQP
EVSVVGAGRGPAGSIIHKLFVNAQRLTESSDEVPVPLEEELRRSGSPEERRQGVQSEFPP
PAGREVILRASVPRPAPYSKALPQRMYSVLTREDFRLAGAFSADTTFF
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgttccgtaaaaaggcagaatcttacaaatcttacctggttcttcagcagcgaaaactg
aaagaggcgcagcaacccaaagggaaactcgagagcattttcagctcgcagctgccttcc
ttcgctgcccagcgaggaattcgacaatttatttcaaaaatagaagaagtattgaatgac
tggaaacttattgggatttcttcaggcaaacctctagagaagggtatatttaccacagga
acatgggaagagaaatcagatgaaatttcatttgcagacttcaaattctcagttacccat
cattatcttgtacaagaacccagtgacaaagatgggaaagaagagctgggagaagatgcc
cttcctctgccaatgcaggacttgctgtgcatgaacaatgactttcctcctcgagcccac
tgtctggtgagatggtacggcttacgtgagtttgtggttattgctccggctgccaataac
gatgctgttattagtgaatccaagtgcaacctcttgctgagttccatttccattgcactg
ggcaacactggctgtcaggtgcccctgttcgtgcagatccatcacaagtggcgccggatg
tacgtgggggagtgccagggcccgggcgtgcgcacggacttcgagatggttcatctgcgc
aaggtgcccagccagtacacccacctgtcagggctgctggacatcttcaaaaccaagatt
ggctgccctttaacacctctgcctccagttagcatggctattcgcctcacctttgtgctc
caggactggcagcagtacttctggccacagcagccaccagatatagacgctctagttggg
ggagaggttggaggcctggaatttgggaagttaccatttggtgcctgtgaagatcctatt
agtgagctgcatttagctacaacgtggcctcaccttgcagaagggataattgttgacaac
gatgtttattccgacctggatccacttcaagcaccccagtggtctgtgagagttagaaaa
gcagataaccctcagtgtctgttgggggacttccttactgagttcttcaagctttgccgt
cggaaggagtcaacggatgagatacttggaaggtctgcatttgatgaggagggaaaagag
gttgctgatatcacccacgcgctgtcgaagctcacggagccagcgccggtcccaatcccc
aaattgtcagtcactaacatggttcacagtgccaagaagaagatccgcaagcacagaggt
gtggatgagtctcctctgaacaatgatgtgctcaacaccattctcctgttcttatttcct
gatgctgctgacaagcttgcagatgtatttgaaaactgagccagcacttcagcaagaaac
aatcctcctccagagaatgaagattataacctcttcagccagtttaagtctgctccatct
gacagtctgacatacaaattagctttatgtctttgtatgataaacttctaccatggagga
gtcaaaggagtggcacatctttggcaagagtttgtgctggaaatgcgttacagatgggag
aacaactacctgattccaggattagctaatggcgctccagatctgagatgctgtttactg
caccagaaacttcagatgctaaattgttgcattgaaaggaagaaagcaagagatgagggg
aaaagggggagcatgtctgatcgttcacctggtggtgcttctggtgatggtgccaaagga
ggagaccactctggagataaccctgacaaggaaaaagaatttggcaagtcttgggaatcg
tggagtgacagtgaagaggagttttttgaatgtcttagtgacacagaagatcttaaagga
aatggacaggaaaatggcaagaaaggaccaaaagagtctgtaaacttaaaaccagaaggt
cgtttgcacccacatggaaaattgatgctgctgcatccaggagagcctctctacgttccc
ataacacaggagccagcccccatgaccgaggacctgctggaggagcagtcggaggtgctg
gccaagctgggcacgtcggcggagggcgctcacctgcgggcgcgcatgcagagcgcctgc
ctgctctccgacatggagtccttcaaggcagctaaccctggctgttgtctggaggatttt
gtgaggtggtactcgcctcgggactacatcgaggaggaagtgattgatgagaaggggaat
aaagtcatcaggggcgagctgagtgcccggatgaagattcccagcaacatgtgggtggag
gcctgggagacagcaaagccagtcccagcacggaggcagaagaggctttttgatgacacc
agggaggctgagaaggtacttcattaccttgcagttcagaaaccagctgaccttgcaagg
catctcctgccttgcatcatccatgcagccgtactcaaggtaaaggaggaagaagcagta
gaagatatatcttcagttaagaagattattaagcagataatatcccattccagcaaagtg
ctacggtttcccagtccagaggacaagaagttggaagaaatcattgctcagattatgagt
gtggaagccatcattgccagggcaaggtctctcaaagcaaaatttggggtagagaaatgt
gaaaatgaagaggagaaagaagatctacaaagatttgtaaacagtctcctggagcagcca
gaagtgtcagtggttggtgcaggaagaggacctgctggcagcatcattcacaagctgttt
gtgaatgctcagaggctgactgaatcttctgatgaggtccccgtcccgctggaggaggag
ctgcggcgctcgggctctccggaggagcgaaggcagggggtgcagtcggagtttcccccg
cccgcgggccgggaggtgatcctgcgcgcctcggtgccccggcccgccccctactccaag
gcgctgccgcagcgcatgtacagcgtgctgacccgcgaggatttccgcctggcgggggcc
ttctcggccgacaccaccttcttctga
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