KEGG   Geospiza fortis (medium ground-finch): 102041642
Entry
102041642         CDS       T03755                                 
Symbol
TSR1
Name
(RefSeq) TSR1, ribosome maturation factor
  KO
K14799  pre-rRNA-processing protein TSR1
Organism
gfr  Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:gfr03009]
    102041642 (TSR1)
Ribosome biogenesis [BR:gfr03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    102041642 (TSR1)
SSDB
Motif
Pfam: RIBIOP_C AARP2CN Tsr1_G-like
Other DBs
NCBI-GeneID: 102041642
NCBI-ProteinID: XP_014164308
LinkDB
Position
Un
AA seq 691 aa
VRADEGGAGGFALLCPRLKQRWRFVTAQAGDLYAVLDLAKVADSLLFILDPVDGWDSAGE
HCLSCLFAQGLPSYALAVPGGTDLPPKKRIDARKKLSKCIEKRFPEAKLFPLNTEQESSL
LLRHLSSQKQRHLAFRARRAHLLARAAEFVPSQDSDLVGTLKVSGFVRGQPLHVNSLVHI
VGHGDFQLSQVDAPPDPLCLNPRVVKGQKRSQQDMEVQVCGDDSGNGAVEMEEDVKVLMK
ADPSKQESLQSEVVPDPMEGEQTWPTEEELQEAEDSLKANRRVVKVPKGTSKYQAAWIVD
DGEEGSEKDDDDDEDDNMDDDLMEESSEEEEEAGEEESETMTVPECLRDEQYDEKMEEDE
QMLERYKQERMDEMFPDEMDTPRDVPARVRFQKYRGLKSFRTSPWDPKENLPRDYARIFQ
FQDFSRTRKNLFRQIEKEETEGASVGWYVTLHVCNVPVSVMESFKEGKPLVLFSLLPHEQ
KMSVLNFLVRRHPGNSEPVRAKEELIFHCGFRRFRASPLFSQHTSADKHKLERFLRPDAA
LVVTVYAPITFPPASVLLFKQRSNGLXXXXATGSLLSVDPDRIVIKRLVLSGHPFKIFTK
MAVVRYMFFNREDVMWFKPVELRTKWGRRGHIKEPLGTHGHMKCHFDGQLKSQDTVLLNX
VFPKWTYDPHVPEPVPWVRSESALPEQEVEM
NT seq 2073 nt   +upstreamnt  +downstreamnt
gtccgtgcggatgagggcggagctggtggctttgctctgctctgcccccggctcaagcag
cgctggcgctttgtcacagcccaggcaggggatctctatgctgttttagaccttgccaaa
gttgctgactccctgctgttcatcctggaccctgtggatggctgggacagtgcaggggag
cactgcctctcctgcctcttcgcacaggggctccccagttatgctctggctgtcccggga
ggcactgacctgccccctaagaagaggatagatgccaggaagaaactctccaagtgcatt
gagaagcgttttcctgaggccaagctgttcccactgaacacagagcaggaatcctcgctg
ctcctgaggcacctgagctcccagaagcagaggcacctggcctttcgtgcccgccgcgct
cacctgctggcccgtgctgctgagtttgtgcccagccaggacagtgacctggtggggacc
ctgaaggtgtctggctttgtccggggacagcccctccacgtgaacagcctggtgcacatc
gtggggcacggggacttccagctgagccaggtggatgctccccctgacccgctgtgtttg
aacccacgcgtggttaaaggacagaagaggagtcagcaggacatggaggttcaggtgtgt
ggggatgactctggaaatggtgctgttgagatggaggaagatgtcaaggtgctgatgaag
gcagacccaagcaagcaggagtctctgcagtcagaagtggttcccgatcccatggaaggg
gagcagacatggcccactgaagaagagctgcaggaagcagaagattctctgaaggcaaac
aggagggtggtgaaggtccccaaaggcacatccaagtaccaggctgcctggattgtggat
gatggagaagaaggcagtgagaaagatgatgatgatgatgaagatgacaacatggatgat
gatctgatggaagagagcagtgaggaggaggaggaggctggggaggaggagagcgagacc
atgaccgtgcccgagtgcctgcgggatgagcagtacgacgagaagatggaggaggatgag
cagatgctggagagatacaagcaggagagaatggatgagatgtttccagatgagatggac
acgccacgggatgtgcctgccagagtcaggttccagaagtacagggggctcaaaagcttc
cggacttctccttgggaccccaaagagaatcttccaagggattatgccaggatcttccag
ttccaggacttctcccgaaccaggaagaacctcttcaggcaaatagagaaggaggagact
gagggagcttcggtgggctggtacgttacacttcacgtctgcaatgtccctgtctcggtg
atggagagcttcaaggaggggaaacccttggtgctgttctcactgcttccccatgaacaa
aagatgtccgtgttgaacttcctggtgcgtcggcatccgggcaacagcgagccagtgagg
gccaaggaggagctgatcttccactgcgggttcaggcgcttccgagcatcccccctgttc
tcccagcacacctcagctgataagcacaagctggaacgtttcctgcgcccagatgctgcc
ctggtggtgactgtctatgctcccatcactttccctcctgcctcagtgctgcttttcaaa
cagagaagtaatggcctggnnnnnnnnnntgccacgggctccctgctctccgtggacccc
gacaggatcgtcatcaagcgcctggtgctcagtggccaccccttcaagatcttcaccaag
atggctgtcgtgcgatacatgttcttcaacagagaggatgtgatgtggttcaagcccgtg
gagctgaggacaaagtggggacgcagagggcacatcaaggagccattagggacccatggg
cacatgaagtgccactttgatgggcagctcaagtcccaggacacggtgctgctgaacngc
gtttttcccaaatggacttacgaccctcacgtccctgagcctgtgccgtgggtgaggagt
gagagtgcactgccagagcaggaggtggagatg

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