Geospiza fortis (medium ground-finch): 102041642
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Entry
102041642 CDS
T03755
Symbol
TSR1
Name
(RefSeq) TSR1, ribosome maturation factor
KO
K14799
pre-rRNA-processing protein TSR1
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gfr03009
]
102041642 (TSR1)
Ribosome biogenesis [BR:
gfr03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
102041642 (TSR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
Tsr1_G-like
Motif
Other DBs
NCBI-GeneID:
102041642
NCBI-ProteinID:
XP_014164308
LinkDB
All DBs
Position
Un
AA seq
691 aa
AA seq
DB search
VRADEGGAGGFALLCPRLKQRWRFVTAQAGDLYAVLDLAKVADSLLFILDPVDGWDSAGE
HCLSCLFAQGLPSYALAVPGGTDLPPKKRIDARKKLSKCIEKRFPEAKLFPLNTEQESSL
LLRHLSSQKQRHLAFRARRAHLLARAAEFVPSQDSDLVGTLKVSGFVRGQPLHVNSLVHI
VGHGDFQLSQVDAPPDPLCLNPRVVKGQKRSQQDMEVQVCGDDSGNGAVEMEEDVKVLMK
ADPSKQESLQSEVVPDPMEGEQTWPTEEELQEAEDSLKANRRVVKVPKGTSKYQAAWIVD
DGEEGSEKDDDDDEDDNMDDDLMEESSEEEEEAGEEESETMTVPECLRDEQYDEKMEEDE
QMLERYKQERMDEMFPDEMDTPRDVPARVRFQKYRGLKSFRTSPWDPKENLPRDYARIFQ
FQDFSRTRKNLFRQIEKEETEGASVGWYVTLHVCNVPVSVMESFKEGKPLVLFSLLPHEQ
KMSVLNFLVRRHPGNSEPVRAKEELIFHCGFRRFRASPLFSQHTSADKHKLERFLRPDAA
LVVTVYAPITFPPASVLLFKQRSNGLXXXXATGSLLSVDPDRIVIKRLVLSGHPFKIFTK
MAVVRYMFFNREDVMWFKPVELRTKWGRRGHIKEPLGTHGHMKCHFDGQLKSQDTVLLNX
VFPKWTYDPHVPEPVPWVRSESALPEQEVEM
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
gtccgtgcggatgagggcggagctggtggctttgctctgctctgcccccggctcaagcag
cgctggcgctttgtcacagcccaggcaggggatctctatgctgttttagaccttgccaaa
gttgctgactccctgctgttcatcctggaccctgtggatggctgggacagtgcaggggag
cactgcctctcctgcctcttcgcacaggggctccccagttatgctctggctgtcccggga
ggcactgacctgccccctaagaagaggatagatgccaggaagaaactctccaagtgcatt
gagaagcgttttcctgaggccaagctgttcccactgaacacagagcaggaatcctcgctg
ctcctgaggcacctgagctcccagaagcagaggcacctggcctttcgtgcccgccgcgct
cacctgctggcccgtgctgctgagtttgtgcccagccaggacagtgacctggtggggacc
ctgaaggtgtctggctttgtccggggacagcccctccacgtgaacagcctggtgcacatc
gtggggcacggggacttccagctgagccaggtggatgctccccctgacccgctgtgtttg
aacccacgcgtggttaaaggacagaagaggagtcagcaggacatggaggttcaggtgtgt
ggggatgactctggaaatggtgctgttgagatggaggaagatgtcaaggtgctgatgaag
gcagacccaagcaagcaggagtctctgcagtcagaagtggttcccgatcccatggaaggg
gagcagacatggcccactgaagaagagctgcaggaagcagaagattctctgaaggcaaac
aggagggtggtgaaggtccccaaaggcacatccaagtaccaggctgcctggattgtggat
gatggagaagaaggcagtgagaaagatgatgatgatgatgaagatgacaacatggatgat
gatctgatggaagagagcagtgaggaggaggaggaggctggggaggaggagagcgagacc
atgaccgtgcccgagtgcctgcgggatgagcagtacgacgagaagatggaggaggatgag
cagatgctggagagatacaagcaggagagaatggatgagatgtttccagatgagatggac
acgccacgggatgtgcctgccagagtcaggttccagaagtacagggggctcaaaagcttc
cggacttctccttgggaccccaaagagaatcttccaagggattatgccaggatcttccag
ttccaggacttctcccgaaccaggaagaacctcttcaggcaaatagagaaggaggagact
gagggagcttcggtgggctggtacgttacacttcacgtctgcaatgtccctgtctcggtg
atggagagcttcaaggaggggaaacccttggtgctgttctcactgcttccccatgaacaa
aagatgtccgtgttgaacttcctggtgcgtcggcatccgggcaacagcgagccagtgagg
gccaaggaggagctgatcttccactgcgggttcaggcgcttccgagcatcccccctgttc
tcccagcacacctcagctgataagcacaagctggaacgtttcctgcgcccagatgctgcc
ctggtggtgactgtctatgctcccatcactttccctcctgcctcagtgctgcttttcaaa
cagagaagtaatggcctggnnnnnnnnnntgccacgggctccctgctctccgtggacccc
gacaggatcgtcatcaagcgcctggtgctcagtggccaccccttcaagatcttcaccaag
atggctgtcgtgcgatacatgttcttcaacagagaggatgtgatgtggttcaagcccgtg
gagctgaggacaaagtggggacgcagagggcacatcaaggagccattagggacccatggg
cacatgaagtgccactttgatgggcagctcaagtcccaggacacggtgctgctgaacngc
gtttttcccaaatggacttacgaccctcacgtccctgagcctgtgccgtgggtgaggagt
gagagtgcactgccagagcaggaggtggagatg
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