Geospiza fortis (medium ground-finch): 102041714
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Entry
102041714 CDS
T03755
Symbol
FIP1L1
Name
(RefSeq) factor interacting with PAPOLA and CPSF1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102041714 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gfr03019
]
102041714 (FIP1L1)
Messenger RNA biogenesis [BR:
gfr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
102041714 (FIP1L1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
102041714
NCBI-ProteinID:
XP_005415710
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All DBs
Position
Un
AA seq
582 aa
AA seq
DB search
MLPVIPAEGMDGRPGTRESTRTAESKRQREEGKAALAARLGRAAKAQPRPSGATALGPFP
SPVSRAGAAGPQLGPRRPKHENEAERPEEEKSSVPPPPGSEEEAAENGVVKTKVTEAEDD
SDSDSDDDEDDVQVTIGDIKTGAPQFSYGAAPVNLNIKAGGRAYGSSGAKVKGLDLDAPG
SINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAYCEKQKRIRMGLEILPVT
STTNKITVQQGRTGNLEKELAVQSTKPDFTSPPALFKSGIPTNRRISGTIDVIGQSITIS
RVEGRRRANENSNIQVLSERSNPEVDSFTKPPPFFPPGAPPTHLPPPPFLPPPPTVSTAP
PLIPPPGIPITVPPPGFPPPPGGPPPSLIPTIDSGHSSGYDGRPVRAFSYGSVTFPHPAG
SAPSWSSLLDTSKQWDYYARREKDRERERERSRDRDRDRDRDRDRDRDRTRDRERDRDHS
PSSSAFNSDEERYRYRDYAERGYDRHRTSREKEDRHRDRRHREKEETRHKSSRSNSRRRH
DSEEGDSHRRHKHKKSKRSKEGKEASGEPAPEQENTEAAPVE
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgctgccggtgatccctgctgaggggatggacgggcgtccagggacgcgggagagcaca
aggaccgccgagagcaaacggcagcgagaggaagggaaggcggctctcgcagcgcgcctc
gggagagcggcgaaagcacagccgcgcccctcgggggcgacggctctcggccccttccct
tccccggtctcccgtgccggtgccgcgggccctcagctcgggccgcgcaggccgaagcat
gaaaatgaagcagagagaccagaggaagaaaaatctagtgttccaccccctcctggaagt
gaagaggaagctgcagaaaatggcgttgtgaaaacgaaggtgacagaggctgaggatgac
agtgatagtgatagtgatgatgatgaagatgatgttcaagtcaccataggggatattaag
acaggagctccacagtttagttatggagcagcacctgtgaatctcaatattaaagcagga
ggacgagcttatggatcttctggtgcaaaagttaagggactggatctagatgcaccaggg
agtattaatggtgtgccacttctggaagtagatttagattcttttgaagataaaccttgg
agaaagccaggggctgatctctcagattattttaactatggcttcaatgaagatacctgg
aaagcttactgtgaaaaacaaaagagaatacgaatgggtcttgaaattttgccagttacc
tcaaccacaaataaaattacggtacagcaaggcagaactggaaatttggagaaagaattg
gcagtgcagtcgaccaaacctgatttcacatctcctcctgccttattcaaatcaggaatt
ccaacaaacaggcggatatctggcacaatagatgtgattggacagtccatcactatcagc
agggtggaaggacgacggcgtgctaatgagaacagcaacatacaggttctctcagaacgc
tctaatcctgaagtagacagttttaccaagccacctccatttttccctccaggagctcca
cctactcaccttccaccacctcctttcctcccaccccctccaactgtcagtactgctcca
cctctgattcccccaccaggtataccaataacagtgccaccaccaggttttccaccacca
cctgggggtcctccaccttccctcatacccacaatagacagtggacattcttctggctat
gatggtcgtcctgttcgtgcattttcatatggcagtgtcacctttccacaccctgcaggt
tctgcaccttcgtggtctagtcttctggacaccagcaaacagtgggattactatgcacga
agagagaaggatagggaacgtgagagggagagatcccgagatcgggatcgcgaccgggac
cgggaccgagacagagatcgggaccgtaccagagacagggaaagggaccgagatcacagt
ccgtcttcaagtgcattcaacagtgatgaagaacgctacagatacagagactatgcagag
aggggctacgaccgccataggacaagcagagagaaagaagacagacacagagacaggagg
cacagagagaaagaagagactcgacacaagtcatctcgaagtaacagcagacgtcgtcac
gacagtgaagaaggggatagccacagaaggcacaaacacaagaagtccaaaagaagcaaa
gaaggaaaagaagccagtggtgaacctgctcctgaacaggaaaacactgaagctgcccct
gtggaatag
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