Geospiza fortis (medium ground-finch): 102041729
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Entry
102041729 CDS
T03755
Symbol
MYO5A
Name
(RefSeq) myosin VA
KO
K10357
myosin V
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
102041729 (MYO5A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gfr03019
]
102041729 (MYO5A)
04131 Membrane trafficking [BR:
gfr04131
]
102041729 (MYO5A)
03029 Mitochondrial biogenesis [BR:
gfr03029
]
102041729 (MYO5A)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gfr04812
]
102041729 (MYO5A)
Messenger RNA biogenesis [BR:
gfr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
102041729 (MYO5A)
mRNA cycle factors
P-body specific factors
102041729 (MYO5A)
Membrane trafficking [BR:
gfr04131
]
Others
Actin-binding proteins
Myosins
102041729 (MYO5A)
Mitochondrial biogenesis [BR:
gfr03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
102041729 (MYO5A)
Cytoskeleton proteins [BR:
gfr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
102041729 (MYO5A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
Myo5a
DIL
IQ
Csm1_N
nSTAND3
Myosin_N
AAA_16
AAA_22
NPHP3_N
DUF4407
Motif
Other DBs
NCBI-GeneID:
102041729
NCBI-ProteinID:
XP_014161923
LinkDB
All DBs
Position
Un
AA seq
1829 aa
AA seq
DB search
MRNTKKYARVWIPDPEEVWKSAELLKDYKPGDKVLQLRLEEGKDLEYSLDPKTKELPPLR
NPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLPIYGEDI
INAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYFATV
SGSASEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYL
LEKSRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNADYFHYTKQGGSPVIDGVDDAK
EMMNTRQACTLLGISDSYQMGIFRILAGILHLGNVEFASRDSDSCTVPPKHEPLTIFCDL
MGVEYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVNKAL
HAAVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIP
WTLIDFYDNQPCINLIEAKMGVLDLLDEECKMPKGSDDSWAQKLYNTHLNKCALFEKPRM
SNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIRVLKSSKFKLLPELFQDEEKVLSPTS
AAPSGRVPLTRMPVKPAKARPGQASKEHKKTVGHQFRNSLHLLMETLNATTPHYVRCIKP
NDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQRDVLGDR
KQTCKNVLEKLIQDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRAACIRIQKTIRGWLMR
KKYMRMRKAAITIQRHVRGYQARCYAKFLRRTRAAITIQKFQRMYVVRKRYQCMRDATIA
LQALLRGYMVRNKYQMMLREHKSVVIQKHVRGWLARRRYGRTLRAIIYLQCCYRRMMAKR
ELKKLKIEARSVERYKKLHIGLENKIMQLQRKIDEQNKEYKSLLEKMTTLEVTYTTETEK
LRGDVERLGXGGEEARSATNRVLSLQEEIAKLRTELHHTQAEKKSIEERADKYKHETEQL
VSELKEQKSMEKKLVEETKQLELDLNDERLRYQNLLNEFSRLEERYDDLKDEMNLMVSIP
KPGHKRTDSTHSSNESEYTFSSEITEAEDLPLRMEEPSEKKAALDMSLFLKLQKRVSELE
QEKQSLQDELDRKEEQALRAKAKEEERPPIRGAELEYESLKRQELESENKKLKNELNELQ
KALTETRAPEVTAPGAPAYRVLLDQLTSVSEELEVRKEEVLILRSQLVSQKEAIQPKEDK
HTMTDATILLEDVQKMKDKGEIAQAYIGLKETNRQSPQDYHMLNEDGELWLAYEGLKQAN
RLLESQLQSQRKSHENELESLRGEIQSLKEENNRQQQLLAQNLQLPPEARIEASLQHEIT
RLTNENLDLMEQLEKQDKTVRKLKKQLKVFAKKIGELEVGQMENISPGQIIDEPIRPVNI
PRKEKDFQGMLEYKKEDEQKLVKNLILELKPRGVAVNLIPGLPAYILFMCVRHADYLNDD
QKVRSLLTSTINGIKKVLKKRGDDFETVSFWLSNTCRFLHCLKQYSGEEGFMKHNTPRQN
EHCLTNFDLAEYRQVLSDLAIQIYQQLVRVLENILQPMIVSGMLEHETIQGVSGVKPTGL
RKRTSSIADEGTYTLDSIIRQLNSFHSVMCQHGMDPELIKQVVKQMFYIIGAVTLNNLLL
RKDMCSWSKGMQIRYNVSQLEEWLRDKNLMNSGAKETLEPLIQAAQLLQVKKKTDEDAEA
ICSMCNALTTAQIVKVLNLYTPVNEFEERVLVSFIRTIQVRLRDRKDSPQLLMDAKHIFP
VTFPFNPSSLALETIQIPASLGLGFISRV
NT seq
5490 nt
NT seq
+upstream
nt +downstream
nt
atgagaaacaccaagaaatatgccagggtttggatccctgatccagaggaggtgtggaag
tcagcagaactcctcaaagattataaacctggagataaagtccttcagcttcgactggaa
gagggcaaggacctagagtacagcctcgacccgaagacgaaggagctgccacccctgagg
aaccctgacatcctggttggcgagaacgacctgacagccctcagctacctgcacgagcct
gctgtcctgcacaacctcaaagtccgcttcatcgactccaaactcatctacacctactgt
ggtattgttttagtggccataaatccttatgagcagctgcctatctatggagaagacatc
atcaatgcctacagtggccagaacatgggggatatggacccacatatctttgcagtggct
gaggaagcatacaagcagatggccagggatgagaggaatcagtccatcattgtcagtggg
gagtctggagctggcaagactgtctctgccaagtatgccatgcggtactttgccacggtc
agtggatctgccagtgaagccaacgttgaggagaaggtcttggcctccaaccccatcatg
gagtctattggaaatgccaaaactaccaggaatgacaacagcagtcgctttggtaaatac
attgagattggttttgataaaagatatcgaatcattggtgctaacatgagaacttacctc
ctggaaaagtccagagtggtgtttcaggcagaagaggagagaaattaccacatcttttac
cagctttgtgcctctgcagcattgcctgagtttaaaactctacgattagggaatgcagat
tactttcactatacgaagcaaggtggaagccctgtgattgatggtgttgatgatgctaag
gagatgatgaacaccaggcaggcctgcactttgttagggattagtgactcctaccagatg
ggaatttttcgaatccttgctggcatccttcacctgggcaacgtagagtttgcatctcgg
gattctgacagctgcactgttcctcccaagcatgagcccctcaccatcttctgtgacctc
atgggtgtggagtatgaggagatggcccactggctttgccataggaagctcgccactgcc
actgaaacttacatcaagccaatttccaaacttcacgccatcaatgccagagatgcgctt
gccaaacatatctatgctaacctcttcaactggattgtagatcatgtgaacaaagccctt
catgccgccgtaaaacagcattctttcatcggggtgttggacatctatggatttgaaaca
ttcgaaatcaacagctttgaacagttctgtatcaactatgccaatgaaaaactgcagcag
cagttcaatatgcatgtctttaagctggaacaagaggaatatatgaaggaacaaatacca
tggaccttgattgatttctatgacaatcagccttgcatcaacctcatagaggccaaaatg
ggagttctggatctgttggatgaggagtgcaagatgccaaaaggctcagacgactcttgg
gcccaaaaactttacaatactcatttgaataaatgtgctctctttgaaaaaccacgtatg
tcaaataaagcctttatcatcaagcactttgctgacaaggtggaatatcagtgtgaaggc
tttttggaaaagaataaagacacggtttatgaagaacaaattagggtcctaaaatcaagt
aagtttaagctgctgccagagttattccaggatgaggagaaggtgctcagccccacttca
gcagccccttcagggcgtgtgcctctgactcgaatgcctgtcaaacctgccaaggccagg
ccaggccaagccagcaaggagcacaagaaaactgtgggacatcagtttcgaaactctctt
catctgctgatggaaacactgaatgctacaactccacactatgtgcgctgcattaagcca
aacgacttcaagttcccattcacgtttgatgagaagcgggcagtgcagcagctgagagcc
tgtggtgtgctggagaccatccggatcagtgctgctggcttcccctccaggtggacgtac
caggagttcttcagccgttaccgggttctgatgaagcagagggatgtccttggtgaccga
aagcagacgtgtaaaaatgtcctggagaagctgattcaggacaaggataagtaccagttt
ggtaagacaaaaatatttttccgggctggtcaagtagcctacctggaaaaaataagggca
gataagttgcgagctgcctgtatccgcatccaaaagacgatccggggctggctgatgagg
aagaagtacatgcggatgaggaaggctgccatcaccatccagagacacgtcagagggtac
caggcacgatgctatgccaagttcctgaggagaacacgagctgccatcaccattcagaag
ttccagcgcatgtacgtggtccgcaagagataccagtgcatgcgagatgccactattgct
ctgcaggccctcctgagaggctacatggtcagaaacaagtaccaaatgatgctgcgggag
cacaagtccgtggtcatccagaagcacgtgcggggctggctggcgcggcggcgctacggc
cgcacgctgcgcgccatcatctacctgcagtgctgctaccgccgcatgatggccaagagg
gagctcaagaagctcaagatagaggcacgctccgtggagcgctacaagaagctccacatt
ggcttggagaacaagatcatgcagctgcagagaaaaatcgatgagcagaacaaagagtac
aaatccctgctggagaagatgaccaccctggaggtcacgtacacgacagagacggagaag
ctgcgcggcgacgtggagaggctggggnnggggggggaggaggccaggagcgccaccaac
cgcgtgctcagcctgcaggaggagatcgccaagctccgcacggagctgcaccacacacag
gccgagaagaagagcattgaggagcgcgcagacaaatacaaacatgaaactgagcagctg
gtgtcagagctgaaagagcagaagtcgatggagaagaagctggtggaggagacgaagcag
ctggagctggatctgaacgacgagcggctgcggtaccagaacctgctcaatgagttcagc
cgcctggaggagcgctacgacgacctcaaggatgaaatgaacctgatggtgagcatcccc
aagcctgggcacaaaagaacggactcaactcacagtagcaatgaatctgaatatactttc
agctctgagatcacagaggcagaagacttaccactcaggatggaggagcctagtgagaaa
aaagcagcgctggacatgtctctgttcctcaagctgcagaaacgggtttcagaactggag
caggaaaagcagtccctgcaggacgaactggacagaaaggaggagcaggctctccgtgct
aaagctaaggaggaagaaaggcctcccataagaggtgcagagttggagtatgagtcactc
aagcgtcaagagcttgaatctgagaataaaaaactgaagaacgagttgaatgagctgcag
aaggccctcacagagacacgagctccagaggtgactgctcctggtgccccagcatacaga
gtcctcctggaccagctgacctcggtcagtgaagagctcgaagtacgcaaggaagaagtt
ctcatcctgaggtctcagcttgtgagccagaaagaggcaattcagcccaaggaggataag
catacaatgacagatgccacaatcctcttggaggatgtacagaagatgaaagacaaagga
gaaatagcacaggcatatattggactgaaggaaacaaacaggcaatctccccaggactat
catatgctgaatgaggacggagaactttggctggcttatgaagggttaaaacaagccaac
aggctgctggagtctcagcttcagtctcagaggaagagccacgagaacgagctggaatct
ctgcgaggcgagatccagagcctgaaggaggagaacaacaggcagcagcagctgctggcg
cagaacctgcagctgcctcccgaggcgcgcatcgaggccagcctgcagcacgagatcacc
cggctgaccaacgagaacctggatttaatggagcagctggaaaagcaggacaaaactgtt
cgcaagttaaagaagcagctgaaagtgtttgccaagaagatcggtgaactcgaagtgggc
cagatggagaacatatcacctggacaaatcattgatgagcctattcgtccagttaacatt
ccacggaaggaaaaggacttccaagggatgttggaatacaagaaggaggatgaacaaaaa
cttgtcaagaatcttattttagagctgaaaccacgtggggtagctgtcaacctgattcca
ggactcccagcgtatattttgttcatgtgtgtgcgccatgcagattacctcaacgatgac
cagaaagtgcggtccttgttgacttccactatcaatggcatcaaaaaagtgttaaagaaa
agaggagatgactttgaaacagtgtccttctggctgtcaaacacctgccggtttttgcac
tgtttgaagcagtacagtggagaagaggggtttatgaagcataatacacctcgtcaaaat
gaacactgcctcactaattttgatttagctgaatatagacaagttctgagtgacttggct
attcagatctaccaacaacttgtccgagtgttggaaaacattctgcaaccaatgattgtt
tcaggaatgctggagcacgagaccatccagggtgtgtcaggggtgaagcccacggggctg
cggaagagaacgtccagcattgctgacgagggcacctacaccttggactccatcatcagg
cagctgaactccttccactcggtgatgtgccagcatggcatggacccagagctgatcaaa
caggtggtcaagcagatgttctacatcattggggctgtaacactcaacaatctcctcctg
cgcaaggacatgtgctcctggagcaaaggaatgcagataagatacaatgtgagtcaactg
gaggaatggctccgtgataaaaatttgatgaatagtggggctaaggaaaccctggaaccc
ctcatccaggctgcacagttgttgcaagtaaaaaagaaaacagatgaagatgcagaagcc
atatgttcaatgtgcaatgcactgaccactgcccagattgtaaaagtcctgaatttgtat
actccagttaatgagtttgaagagagagtcttggtgtcatttatacgtacaatacaggtg
cgtctgcgggacaggaaggactctcctcagttgctcatggatgccaaacacatcttccct
gttaccttcccattcaatccatcctctctggctttagaaaccattcagatcccagccagc
ttgggcctgggcttcatatcacgtgtgtga
DBGET
integrated database retrieval system
