Geospiza fortis (medium ground-finch): 102041742
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Entry
102041742 CDS
T03755
Symbol
TRIO
Name
(RefSeq) trio Rho guanine nucleotide exchange factor
KO
K08810
triple functional domain protein [EC:
2.7.11.1
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
gfr01001
]
102041742 (TRIO)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gfr04131
]
102041742 (TRIO)
Enzymes [BR:
gfr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
102041742 (TRIO)
Protein kinases [BR:
gfr01001
]
Serine/threonine kinases: CAMK group
Trio family [OT]
102041742 (TRIO)
Membrane trafficking [BR:
gfr04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
102041742 (TRIO)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH3-RhoG_link
RhoGEF
Pkinase
Spectrin
PK_Tyr_Ser-Thr
I-set
PH
Ig_3
SH3_1
ig
CRAL_TRIO_2
SH3_2
PH_10
CRAL_TRIO
IQ_SEC7_PH
Ig_2
SH3_9
PH_19
PH_13
V-set
Motif
Other DBs
NCBI-GeneID:
102041742
NCBI-ProteinID:
XP_005422622
LinkDB
All DBs
Position
Un
AA seq
3040 aa
AA seq
DB search
MNPLLASRRFRKNDEMKAMEVLPILKEKVAYLSGGRDKRGGPILTFPARSNHDRIRQEDL
RRLISYLACIPSEEVCKRGFTVIVDMRGSKWDSIKPLLKILQESFPCCIHVALIIKPDNF
WQKQRTNFGSSKFEFETNMVSLEGLTKVVDPSQLTPEFDGCLEYNHEEWIEIRVAFEDYI
SNATHMLSRLEELQDILSKKEMPQDLEGARNMIEEHSQLKKKVIKAPIEDLDVEGQKLLQ
RIQSSDSFPKKNSGSGNADLQNLLPKVSTMLDRLHSTRQHLHQMWHVRKLKLDQCFQLRL
FEQDAEKMFDWITHNKGLFLNSYTEIGTSHPHAMELQTQHNHFAMNCMNVYVNISRIMSV
ASRLIESGHYASQQIKQIASQLEQEWKAFAAALEERSTLLDMSSIFHQKAEQYMSNVDSW
CKACGEVELPSELQDLEDAIHHHQGIYEHITLAYSEVSQDGKSLLDKLQRPLTPGSSDSL
TASANYSKAVHHVLDVIHEVLHHQRQLENIWQHRKVRLHQRVSVCLSSVPQVLDWIENHG
EAFLSKHTGVGKSLHRARALQKRHEDFEEVAQNTYTNADKLLEAAEQLAQTGECDPEEIY
QAAHQLEDRIQDFVRRVEQRKILLDMSVSFHTHVKELWTWLEELQKELLDDVYAESVEAV
QDLIKRFGQQQQTTLQVTVNVIKEGEDLIQQLRDSAISSNKTPHNSSINHIETVLQQLDE
AQSQMEELFQERKIKLELFLQLRIFERDAIDIISDLESWNDELSQQMNDFDTEDLTIAEQ
RLQHHADKALTMNNLTFDVIHQGQDLLQYVNEVQASGVELLCDRDVDMATRVQDLLEFLH
EKQQELDVAAEQHRKHLEQCVQLRHLQAEVKQVLGWIRNGESMLNAGLITASSLQEAEQL
QREHEQFQHAIEKTHQRTLQFQQKAEAMLQANHYDMDMIRECAEKVASHWQQLMLKMEDR
LKLVNASVAFYKTSEQVCSVLESLEQEYKREEDWCGGADKLGPNSETDHVTPMISKHLEQ
KEAFLKACTLARRNADVFLKYLHRNSVNMPGMVTHIKAPEQQVKNILNELFQRENRVLHY
WTMRKRRLDQCQQYVVFERSAKQALEWIHDNGEFYLSTHTSTGSSIQHTQELLKEHEEFQ
ITAKQTKERVKLLIQLADGFCEKGHAHATEIKKCVTAVDKRYRDFSLRMEKYRTSLEKAL
GISSDSNKSSKSLQLDIIPASVPGSEVKLRDAAHELNEEKRKSARRKEFIMAELIQTEKA
YVRDLRECMDTYLWEMTSGVEEIPPGIVNKEHIIFGNMQEIYEFHNNIFLKELEKYEQLP
EDVGHCFVTWADKFQMYVTYCKNKPDSTQLILEHAGAYFDEIQQRHGLANSISSYLIKPV
QRITKYQLLLKELLTCCEEGKGEIKDGLEVMLSVPKRANDAMHLSMLEGFDENIESQGEL
ILQESFQVWDPKTLIRKGRERHLFLFEMSLVFSKEVKDSSGRSKYIYKSKLFTSELGVTE
HVEGDPCKFALWVGRTPTSDNKIVLKASSIENKQDWIKHIREVIQERTIHLKGALKEPIH
IPKTAPTTKQKGRRDGEDLDSQGDGSSQPDTISIASRTSQNTLDSDKLSGGCELTVVIHD
FTACNSNELTIRRGQTVEVLERPHDKPDWCLVRTTDRSPAAEGLVPCGSLCIAHSRSSME
MEGIFNHKDSLSVSSNDASPPASVTSLQPHMIGAQSSPGPKRPGNTLRKWLTSPVRRLSS
GKADGHVKKLAHKHXRXXXXXXXXXXXXXXXDSAATPQDETVEERGRNEGLSSGTLSKSS
SSGMQSCGEEEGEEGADAVPLPPPMAIQQHSLLQPDSQDDKTSSRLLVRPTSSETPSAAE
LVSAIEELVKSKMALEDRPSSLLVDQGDSSSPSFNPSDNSLLSSSSPIDEMEERKSSSLK
RRHYVLQELVETERDYVRDLGYVVEGYMALMKEDGVPDDMKGKDKIVFGNIHQIYDWHRD
FFLGELEKCLEDPEKLGSLFVKHERRLHMYIVYCQNKPKSEHIVSEYIDTFFEDLKQRLG
HRLQLTDLLIKPVQRIMKYQLLLKDFLKYSKKANLDTTELEKAVEVMCIVPKRCNDMMNV
GRLQGFDGKIVAQGKLLLQDTFLVTDQDAGLLPRCKERRVFLFEQIVIFSELLDKKKGFS
MPGFLFKNSIKVSCLSLEENVDSDPCKFALTSRTGDVTETFILHSASPGVRQLWIHEINQ
ILENQRNFLNALTSPIEYQRNHSSGGGGGGSGSANSGGPSSCTGIPSSSRSRPSRIPQPV
RHHSPVLVSSAASAQAEADKMSGMSIHNHSLPHYNTSLETGLSQPDRHPPSAEPDGPQRE
AEQIPKMKVIESPRKTAGNISGSADGAQKDSRGISEDSRTRNSIGSLTLGKPRPGAISPM
NSPLSTTFPSPFGKETFPPSSPLQKGSFWSSIPASPASRPGSFTFPGDNDPLQRQVHRHS
SHSKDTDRMSTCSSTSEQSVHSTQSNGSESSSSSNISTMLVTHDYTAVKEDEINVYQGEV
VQILASNQQNMFLVFRAATDQCPAAEGWIPGYVLGHTSAIIIDNPDGTIKKSTSWHTALR
LRKKSEKKDKDGKREGKLENGYRKSREGLANKVSVKLLNPNYIYDVPPEFIIPLSEVTCE
TGETIVLRCKVCGRPRASVTWKGPDHNTLSNDGHHSISYSDLGEASLKIVGVTAEDDGIY
TCIAANDMGSVSSSASLRVLGPGSDGIMVIWKDNFDSHYSEVAELGRGRFSVVKKCDQKG
TKRAVATKFVNKKLMKRDQVTHELGVMQNLQHPQLIGLLDTFETSTNYILVLEMADQGRL
LDYVVRWGNLTEGKIRLYLGEILEAVQYLHNHRIAHLDLKPENILVDQSSTKPTIKLADF
GDAVQLNTTYYIHQLLGNPEFAAPEIILGNPVSLTSDVWSIGVLTYVLLSGVSPFLDESV
EETCLNICRLDFSFPDDYFKGVSQKAKDFVCFLLQDDPAKRPSAALALQEQWLQLGNGKS
AESIDISRLTSFIERRKHQNDVRPIRSIKNFLQSRLLPRV
NT seq
9123 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctttacttgcatccagaaggtttcgcaaaaatgatgaaatgaaggctatggaa
gtattgccaattttaaaggaaaaagttgcatacctttcaggtggcagagataagcgtgga
ggtcccattctaacatttccagctcgtagtaatcacgacagaatacggcaagaagacctt
agaagactaatttcgtatctagcgtgtattcctagtgaggaagtatgtaaacgaggattc
accgtcattgtagatatgcgtgggtcaaaatgggactccataaagcctctgctgaagatt
ttacaggaatcctttccatgttgtattcatgttgcactgataatcaagccagacaatttc
tggcagaaacagaggactaactttggcagctctaagtttgagtttgagacaaatatggtg
tctctggaaggccttaccaaagtagttgatccttctcagctaaccccagaatttgatggc
tgtttggagtacaaccatgaggagtggatagaaatcagagttgcctttgaggactacatt
agcaatgcaacccatatgctgtccagactggaggagctgcaagatatattgtcaaaaaag
gaaatgcctcaggacctggaaggtgctcgcaatatgatagaggagcattcacaattaaaa
aagaaggtcattaaggcccctatcgaggaccttgatgtggaaggacaaaagctgctccag
aggatacagagcagtgatagctttcccaaaaagaactctgggtcagggaatgcagactta
cagaaccttttacccaaagtgtccaccatgctggacaggctgcactcaacacggcagcat
ctgcatcagatgtggcatgtgcggaaattgaaattggaccaatgctttcagctcaggctg
tttgagcaggatgctgaaaagatgtttgactggatcacacacaacaaaggtctgttcctg
aacagctacacagagattggaaccagtcacccccacgcgatggagcttcagacacagcac
aatcactttgccatgaactgcatgaatgtgtatgtaaacataagccgcatcatgtcagta
gcaagccgcctgattgagtctggtcattacgcttcacagcaaatcaaacagattgccagt
cagctggaacaggaatggaaggcatttgctgcagccttggaagaacgtagcacattactg
gacatgtcctccatcttccatcaaaaagccgaacagtacatgagcaatgtggactcatgg
tgcaaagcctgtggtgaggtggagcttccatcagagctgcaagatttagaagatgctatc
catcatcatcaagggatatatgagcacattactttggcttactctgaggtgagccaagat
gggaagtcactccttgataaacttcagagacctttgactcctgggagctctgattccctc
accgcatctgccaactactccaaagcagttcatcatgtcctggatgtcatccatgaagtg
ttgcatcaccagcgccaactagaaaacatctggcagcatcgaaaggtccgcttgcaccag
cgggtttctgtgtgtctttcttctgtaccacaggtgttggattggattgaaaaccatgga
gaagcttttcttagcaaacacactggagtgggaaaatccctgcatcgggccagagctttg
cagaaacgccatgaagacttcgaagaggttgcgcagaacacatatacgaatgcagataag
ctcctagaagcagcagagcagcttgctcagactggggagtgtgacccagaggaaatttat
caagctgcccatcagctcgaagaccggatacaggatttcgtcaggcgagtggagcagcgc
aagatcctgctggacatgtctgtgtcctttcacactcacgttaaagagctatggacgtgg
cttgaagagctgcagaaagaacttcttgatgatgtctatgctgagtctgtggaggctgtc
caagacctgattaaacgttttggtcaacagcaacagaccactctgcaggttacagtcaat
gtcataaaagaaggtgaagatctcatccagcaactaagggattctgccatttctagtaac
aagaccccccataacagctcgatcaaccatatagagactgtcctgcagcagctggatgag
gcccagtctcagatggaggagcttttccaagaacgcaagatcaaactggagctgtttctg
cagctccgcatatttgaaagagatgcaatagatattatttcagaccttgagtcttggaat
gatgagctctctcagcagatgaatgactttgacactgaagatcttacaatagcagaacag
aggctccagcatcatgcagacaaagccctgaccatgaataacttgacctttgatgtcata
caccaagggcaggatctgctgcagtatgtcaatgaagtgcaggcatctggtgtggagctg
ctgtgtgacagagacgtggacatggccactcgtgtgcaggacctgctggagttcctgcac
gagaagcagcaagagctggacgtggcggctgagcagcaccgcaagcacctggagcagtgc
gtgcagctgcggcacctgcaggctgaggtcaaacaggttttgggctggattcgaaatgga
gagtcaatgttaaatgctgggctcatcactgctagctctttgcaggaggcagagcagtta
cagagggagcatgagcagtttcaacatgcaatagagaaaacacatcaaagaaccctgcag
tttcagcagaaggcagaggcaatgctgcaggctaatcactacgacatggacatgatccgg
gagtgcgcagagaaggtcgcttcccactggcaacagctgatgctgaagatggaggatcgt
ctcaagcttgtgaatgcctctgttgccttctataaaacttctgagcaggtgtgcagtgtg
ctggaaagcctggagcaagaatataagcgagaagaagattggtgtgggggagcagacaaa
ctgggccccaactctgaaacagatcacgttactcccatgataagcaaacacctggagcag
aaggaagcatttctgaaggcctgcacactggctcggaggaatgctgatgtcttcctgaaa
tacctgcacaggaacagtgtcaacatgccagggatggtgacacacatcaaagcacctgaa
cagcaagtgaaaaatatcttgaatgagctcttccagagggagaaccgtgtgctgcattat
tggaccatgcgtaaaaggcgtcttgatcaatgccagcagtacgtggtgtttgaaagaagt
gccaaacaggctctggaatggattcatgacaatggagagttttatttatccacacatact
tccactggttccagtatccagcacactcaagagttgttaaaagaacatgaagagtttcag
atcacagcaaagcaaaccaaagagagggtgaagttgttgatacagctggctgatggcttt
tgtgaaaaagggcatgctcatgcaacagagattaaaaaatgtgtcacagcagtggataag
aggtacagagacttttccctgcgcatggagaaatacaggacctctttagagaaagctctg
ggtatttcctcagattccaataaatcgagcaaaagcttgcagctggatataatcccagcc
agtgtccctgggtcagaggtgaaactgcgcgatgctgctcatgagcttaacgaagaaaaa
cgaaagtctgcccgcaggaaagagttcattatggctgagctaattcagacagaaaaggct
tacgtaagagacctccgggaatgcatggatacatatctatgggaaatgacaagtggagtt
gaggagatcccacctggtattgtaaacaaagaacacattatctttggaaacatgcaggaa
atttatgagttccacaataatatatttctcaaggagttggaaaaatatgaacagttacca
gaagatgttggacattgcttcgttacttgggcagacaaattccagatgtatgttacctac
tgtaaaaataagccagattccactcagctgatattagaacatgcaggagcatactttgat
gagatacaacaacgacatggactggccaactctatctcctcttaccttatcaaacctgtc
caaaggataacaaaataccagcttcttttaaaggagctgctcacatgctgtgaagaaggt
aaaggtgagattaaggatggcctggaggtgatgcttagtgtgccaaagcgagccaatgat
gctatgcacctcagcatgctggaaggctttgatgaaaatatagaatctcagggagagctt
atccttcaagaatccttccaagtgtgggacccaaaaactctgattcgaaagggaagagag
aggcaccttttcctttttgagatgtccttggttttcagtaaagaagtgaaggactcgagc
ggaaggagcaagtacatttacaagagcaaactgtttacttctgaactgggtgtcacagaa
catgtagaaggagacccctgcaagtttgctctgtgggttggaaggacaccaacttcagac
aacaaaattgttctcaaggcatccagtatagagaataaacaggactggatcaaacacatc
cgggaagtgatacaagaaaggactattcatctgaaaggagcattgaaagagcccatccac
attcccaaaactgcaccaacaacaaaacagaaaggaagaagagatggcgaggacctggac
agtcagggagatggcagcagccagcctgatactatttcaattgcctcgcgaacctcccag
aacacgctagacagtgataagttgtctggtgggtgcgagctgacagtggtgatccatgac
ttcactgcctgcaacagcaacgagctgaccatccgccgtgggcagaccgtggaggtcctg
gagaggccccatgacaagcccgactggtgcctggtgcgaaccacggatcgctccccagct
gcggaaggcctggtcccctgtggctccctctgcatcgcccactctcgcagcagcatggag
atggagggcatttttaaccacaaagactccctttcagtctccagcaatgacgccagtcct
cccgcttccgtaacatcacttcagccccacatgatcggtgctcagagctccccgggcccc
aagcgccctggcaacaccttgaggaagtggctcaccagtcctgtgaggcgcctgagcagt
gggaaagcagatgggcacgtcaaaaagctggcccacaagcatnnaagaannnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngacagcgccgcaaccccacaagatgaa
actgttgaagagaggggtcggaacgaggggctgagcagtggcactctctccaagtcatcc
tcttcaggcatgcagagctgcggggaggaggaaggcgaagagggagcagatgctgtgcca
ctgcctcctcccatggcaatccagcagcacagtctgctccagcccgactcgcaggatgac
aagacatcttctcgattgctggtgcggccgacaagctctgagacgcccagtgctgcagaa
ctcgtcagtgccattgaagagctcgtcaaaagtaaaatggctctggaggaccgtccaagt
tccctgttggtagatcaaggtgacagcagcagtccatccttcaacccttcagataactcc
cttctatcctcctcgtcacccatagatgagatggaggaaaggaaatccagctccttaaaa
agacggcactatgtcttacaggaattagtggagacagagcgagattatgtgcgagatctg
ggctatgtagttgagggttatatggcacttatgaaggaagatggtgtacctgatgatatg
aaaggcaaggacaagattgtatttggaaacattcaccagatttatgactggcacagagac
ttctttttaggagagttggagaagtgccttgaagatccagaaaagctgggatccctgttt
gttaaacatgagagaaggttgcacatgtacatagtttactgccaaaacaaaccaaagtct
gagcacattgtctcagaatacattgatacattttttgaggatctaaagcaacgcctgggc
cacagacttcagctcacagacttgctaataaaacctgtgcagagaattatgaaataccag
ctgttactaaaggacttcctcaagtattctaagaaagctaatcttgacacaacagaacta
gagaaagctgtagaggtcatgtgtatagtaccaaaacggtgtaatgacatgatgaatgtt
ggccgcctgcaaggatttgatggtaaaattgtagcccagggtaagctcctgctccaggac
acatttttggttacagaccaggatgcaggacttctgccacgctgcaaggagagacgggtc
ttcctgtttgagcagattgtcattttcagtgagctgctagataaaaagaaaggtttctcc
atgccgggattcttgtttaaaaacagtatcaaggtgagttgcctttctctggaggaaaat
gtggacagcgatccatgtaaatttgcactaacatcaagaacgggtgatgtcacggagacc
tttattttgcattctgccagtccgggagtccgccagttatggatccatgaaattaaccaa
attttggaaaaccagcgcaactttttaaatgccttgacgtccccgatcgagtaccagagg
aaccacagcagtggtggaggcggcggcgggagcggcagcgctaacagcggcggccccagc
agctgtactggcatccccagctccagccgtagccggccatcccggatcccccagcctgtc
agacaccattccccagtcctggtctcctctgcagcctcggcccaagcagaggcagacaag
atgtcaggtatgtccattcacaatcactccctgccacactacaacacctctttagaaact
ggcctgagccagccagacaggcaccctcccagtgcagagccggatggtcctcagagagaa
gctgaacagattcccaagatgaaagttattgaaagtcccaggaagacagcaggaaacatt
tctggctcagctgatggagcccagaaagactcacgtggaatctcagaggacagtcgaaca
agaaacagcataggatcactgacgcttgggaagccaaggccaggagccatctctccaatg
aactctcctctgtccacgactttcccttctccttttggcaaggaaacctttccacccagc
agccccctgcagaagggctccttttggagctccatcccagcatcccctgccagccgccct
ggctccttcactttccctggggacaatgaccccctccagcggcaggtccaccgccactct
tcacacagcaaggacacagaccgcatgagcacatgctcctcgaccagcgagcagtcagtt
cactccacccagagtaatgggagtgaaagtagcagcagtagcaatatctccaccatgctg
gtgacacacgattacacggcagtgaaggaggatgagataaatgtctaccaaggagaggtc
gtgcagattctagccagcaaccaacagaacatgtttttggtgttcagagccgccaccgat
cagtgccccgcagccgagggctggattcccggctatgtcttggggcataccagtgcaatc
atcattgacaaccctgatggaaccatcaagaagtcaacgtcttggcacacagcactccga
ttaaggaagaaatctgagaaaaaagataaagacggcaaaagggaaggcaagctagaaaat
ggttatcgcaaatcccgagaaggacttgccaacaaagtttctgtaaaacttctcaacccc
aattacatttatgatgttcccccagagtttataattccattgagtgaggtaacatgtgag
acaggagagaccatcgtgcttaggtgtaaagtctgtggtcgccccagggcttcagttact
tggaaaggtcctgatcataatacactgagcaatgacggtcatcacagcatttcctacagt
gacctgggagaggcgtcgctgaaaatcgtaggcgtcactgcggaagacgatggtatctac
acgtgcatagctgcaaacgacatgggttcggtttcatcctccgccagtctgcgagtttta
ggtcctggaagtgatgggatcatggtaatctggaaagacaactttgattcccactatagt
gaagtggctgagcttggcaggggcagattttctgtcgttaagaagtgtgaccagaaggga
accaagcgagcagtagccactaagtttgtgaataagaagttgatgaagcgagaccaggtt
acccatgaacttggagtcatgcagaatctccagcatccccagctcattggccttcttgac
acctttgagacctccaccaactacatactagtgttagaaatggctgaccagggtcgcctt
ctggactatgtcgtgcgatggggaaacctcacagaagggaagatcagactctacctggga
gagattctggaagctgtgcagtatcttcataaccacagaatagcgcatttggacctaaag
cctgaaaatattttggtggaccagagttccactaagccaacaataaaactggctgacttt
ggagatgcagtccagctcaataccacatattatatccaccagttacttggaaacccagag
tttgcagctcctgaaattattcttggaaatcctgtttcactcacttcagatgtttggagc
attggagtgctcacttatgtccttcttagtggcgtctctcctttcctggatgaaagcgta
gaggaaacttgcctgaatatttgccgcttagactttagtttcccagatgactacttcaaa
ggagttagccagaaggccaaagattttgtatgcttcctacttcaggatgacccagctaag
cgtccctcggctgcactggccctccaggagcaatggctgcagctggggaatggcaaaagt
gctgagagcattgatatatccagactgacttcattcattgagcggcgaaaacaccagaat
gatgttcgacccatccgtagcattaaaaacttcttacagagcaggctcttgccaagagtt
tga
DBGET
integrated database retrieval system
