Geospiza fortis (medium ground-finch): 102041783
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Entry
102041783 CDS
T03755
Symbol
LRBA
Name
(RefSeq) LPS responsive beige-like anchor protein
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gfr04131
]
102041783 (LRBA)
Membrane trafficking [BR:
gfr04131
]
Endosome - Lysosome transport
Others
Others
102041783 (LRBA)
Endosome - Golgi transport
102041783 (LRBA)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
102041783 (LRBA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Laminin_G_3
Neurobeachin
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR55
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
SUKH_6
IspD
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
102041783
NCBI-ProteinID:
XP_014167378
LinkDB
All DBs
Position
Un
AA seq
2836 aa
AA seq
DB search
MASEGKQVVQPTGDDGGGGAGKEGNAAEGGSVLQPLNPGVPIRGIKMKFAVLTGLVEVGE
VSNRDIVDTVFNLLVGGQFDLEMNFIIQEGEGITCMVDLLDKCDITCQAEVWSMFTAILK
KSIRNLQACTEVGLVEQVLRRIDRADNMIADLLVDMLGVLASYNLTVRELKLFFSKLQGE
KGRWPPHAGKLLSVLKHMPQKYGPDAFFNFPGKSAAAIALPPIAKWPYQNGFTFHTWLRM
DPVNNINVDKDKPYLYCFRTNKGLGYSAHFVGGCLIITSIKSKGKGFQHCVKFDFKPQKW
YMVTIVHIYNRWKNSELRCYVNGELASYGEITWFVNTSDTFDKCFLGSSETADANRVFCG
QMTSVYLFSEALNAAQIFAIYQLGLGYKGTFKFKAESDLFLDEHHKLLLYDGKLSSAIAF
MYNPRATDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVLTHSIQSALHSIGGVQVLFPL
FAQLDYRQYSSDHIDTTVCSTLLAFIMELLKNSIAMQEQMLSCKGFLVIGHSLEKSSKAH
VTRAVLELCLAFSKYLSNLHNGVPLLKQLCDHVLLNPAIWIHIPAQVQLTLYTYLSTEFI
ATVNIYGAIRRVGTVLLVMHTLKYYYWVVNPQDRSGITPKGIDGPRPTQKEILSLRAFLL
MFIKQLVMKDYGIKEDELQAILNYLLTIHEDDNLMDVLQLLVALMSEHPGSMIPAFDQRN
GLQVVYKLLASQSEGIRVQALKVMGYFLKHLSPKRKAEVMLGHGLFSLLAERLMLQTSLF
TMTTYNVLFEILTEQICTQVIHKQHPDPDSTVKIQNPQILKVIAILIRNSPQCPETLEVR
RAFLSDMIKLFNNSRENRRSLLQCSVWQEWMLSLCCFNPKTSEEQKITEMVYTIFRILLY
HAIKYEWGGWRVWVDTLSITHSKVTFEMHKESLSQMYKEYQEKGGEGSGVHSSTPIRTIS
GISKEAETKGKQQSLELKENAAAPSCITDGDAECRTEKKEKENSSDGGQQTHSVSNHKEE
LKGEDLSTTEDLKAVPCVEFSPEPETVKPTVSEISTGIAEAIEDSSKADELVEETVAVTA
ASLAMQTPVEGGTPTSPEGLEKSAVEVEDEDDFVDLKDESSLPLPSDELSEGNKECGSNA
SEVTKQEETTEKQPETGLLKSEGTEGVDGKKQELTLPETVSSAVLEVVTHETKTTVENTN
AHVAEPSGASDKRIAKLDVSSVASDTERLELKSNTCLEAPLPPRSMPEPSRQQVSSGQEL
AAASDGQRRDTRSPVFRIPEFKWSLMHQRLLTDLLFSIETDIQMWRSHSTKTVMDFVNSS
DNVVFVHNTIHLISQVMDNMIMACGGILPLLSAATSATHELENIEPTQGLSVEASLTFLQ
RLINLVDVLIFASSLGFTEIESEKNMSSGGILRQCLRLVCAVAVRNCLECQQHAQMKPIG
ETGRNQKAVQGFIGSVKSPAKSPVDIVTGGISPIRDHDRLLQDMDINRLRAVVFRDIEDS
KQAQFLALAVVYFISVLMVSKYRDILEPQNERRPPNQSQSLKESENENNETAAAVVEKPS
AAPGASTNTEDSENIASMQRRDSGLGEEATLAQTNNSSGAAEAGPLSVSAGPDAVSEVLC
TLSLEVNKSQEGRSETGTEESKSVASVPAAKNVNVKDILRSLVSTPADGPAVDAALLPPT
FLGVLGDGAAEQPVQFHSFDRSVVVPTKKSSISSSTAAIGAPTNAVSVVSSLDSAQAPDL
SGESPGRGSSNSKLPSVPAVSSVPEDSASNMSITDRLEHALEKAAPLLREIFVDFAPFLS
RTLLGSHGQELLIEGLVCMKSSSSVVELVMLLCSQEWQNSIQKNAGLAFIELVNEGRLLS
QTMKEHLVRVANEAEFILSRQRAEDINRHAEFESLCAQYSADKREEEKMCHHLITAAKYR
DQVTATQLIQKIINILTDKHGAWGSSAPSRPREFWRLDYWEDDLRRRRRFVRNPLGSTHP
EATLRAAGEHAPDEDILVKGKQSIKSQVLGNQNSESEILLEGDDDIMSFMEEREVENLTG
PVSLSTPAQLVAPSVVVKGTLSITLSELYFEVDEEDPSFKKIDPKILAYTEGLHGKWLFS
EIRSIFSRRYLLQNTALEIFMANRVGVMFNFPDQATVKKVVNCLPRVGIGTIFGLPQTRR
ISLASPRQIFKASNMTQRWQHREISNFEYLMFLNTIAGRTYNDLNQYPVFPWVITNYESE
ELDLTLPSNFRDLSKPIGALNPKRAAFFAERYESWEDDQVPKFHYGTHYSTASFALTWLL
RIEPFTTLFLNLQGGKFDHADRTFSSISRAWRNSQRDTSDIKELIPEFYYLPEIFVNSNN
YNLGVMDDGTVVSDVELPPWAKTPEEFVRINRLALESEFVSCQLHQWIDLIFGYKQQGPE
AVRSLNVFYYLTYEGAVNLSSITDSVLREAVEAQIRSFGQTPSQLLIEPHPPRSSAMQVY
LLLQSPLMFTEQAQQDVIMVLKFPSNSPVTHVAANTQPGLATPAVITVTANRLFAVNKWH
SLPGAVQDQPYQLPVEIDPLIASNTGMHRRQITDLLDQSIQVHSQCFVITSDNRYILVCG
FWDKSFRVYSTDSGKLMQVVFGHWDVVTCLARSESYIGGNCYILSGSRDATLLLWYWNGK
TNIIGDNPRASDFASPRAVLTGHDYEITCAAICAELGLVISGSKEGPCLIHSMNGDLLRT
LEGPERLQGPESCLRPKLIQASREGHCVIYYENGLFCVFSVNGRLQATMETDDKIRAIQL
SRDGQYLLTGGDNGVVMVWQVWDLKRLFAYPGCDAGIRSMALSYDQRCIMTGMASGSIVV
FYNDFNRWHHEYQTRY
NT seq
8511 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtgaaggcaaacaagttgttcagccaacaggtgatgatggaggaggaggagcg
ggaaaagaaggaaatgctgctgaagggggaagtgtgctgcagcctttgaatccaggagtc
ccgatccgaggcattaagatgaaatttgccgtgctgacaggactggtggaagttggtgaa
gtgtccaacagagatatagtcgacaccgtgtttaacctgctcgttgggggccagtttgac
ttggaaatgaactttatcatccaagaaggagagggcatcacctgcatggtggacttactg
gataagtgtgacatcacctgccaggctgaggtttggagcatgttcacagcaatcctgaag
aaaagcatacggaatctccaggcctgcacggaagtggggctcgtggaacaagtgctcagg
aggatcgacagagctgacaacatgattgcagatctcttagtggacatgctgggtgtgttg
gcgagctataacctgacagttcgagagctgaagttattcttcagcaagctgcaaggagaa
aaagggagatggccaccacatgctgggaagttactgtctgtgttgaaacacatgcctcag
aagtatggacctgatgccttcttcaactttccaggaaaaagtgctgcggctattgcctta
cctcctatagccaagtggccctaccagaatggatttactttccacacttggctaagaatg
gatcctgtaaataatattaatgtggataaggataagccttatttatattgttttcgaaca
aacaaaggacttggttattctgctcactttgttggaggctgcttgatcataacgtccata
aaatcaaagggaaaaggtttccagcactgtgtaaaatttgatttcaagccacaaaagtgg
tacatggtgactatagtgcacatctataaccgctggaagaacagcgaactccggtgttac
gtgaacggggaactggcatcttatggggaaataacgtggtttgtcaacaccagtgatacg
tttgataaatgtttcctgggttcttcagaaacagcagatgccaatcgagtgttttgcggg
cagatgacatctgtttacctttttagtgaagctctcaatgctgctcagatctttgccatt
tatcagcttggcctgggatataagggaacgttcaagttcaaggcagaaagtgatctcttc
ctcgatgaacatcacaaattgttgctatatgatggcaaactctccagtgctattgctttt
atgtacaatccaagggctacagatgcacagctgtgtcttgagtcatcccctaaggataac
ccttctatttttgttcattcaccacatgccctcatgctgcaggatgtgaaagcagtcttg
acgcactccatccaaagtgccctgcactccattggaggagtgcaggtgcttttccctctc
tttgcacagttggactataggcaatattcctctgaccacattgacacaactgtttgttct
actttactggcattcatcatggagttgttgaagaactctattgctatgcaagaacagatg
ctttcctgtaaaggcttccttgtgataggacacagcctagaaaagtcttccaaagctcac
gttaccagagctgtgctagaactttgccttgccttctcaaaatacctgagcaatttacac
aatggggtacccctgctgaagcagctgtgtgatcatgttctcctgaatcctgcaatatgg
attcatatcccagcacaggttcagctgaccctgtacacttacctgtctaccgagttcatt
gccactgttaacatttatggagcaatccggcgggttgggacagttcttctggtcatgcac
accctcaagtattattactgggtggtgaaccctcaggatcgcagtgggataactcccaag
ggcatagatggtccacggcctactcagaaggagattttatccctgcgagcatttttgttg
atgttcattaaacagctagtcatgaaggactatggaataaaagaagatgaattgcaggct
atcctcaattacctgcttactatacatgaggatgacaatctaatggatgtcttgcagttg
ctggttgctctgatgtcagagcatcctggttctatgattcctgcatttgatcagaggaat
ggattacaggttgtctacaagcttttagcatcacaaagtgaaggcatcagagtgcaagct
ctgaaagtgatgggatatttcttaaagcatctttctccgaagaggaaagctgaagtcatg
cttggacatggattgttctctttgttggctgaaaggctgatgcttcagacaagcttattc
accatgaccacatacaatgtcctgtttgagattctgactgaacaaatttgcactcaagta
atacataaacaacatcctgacccagattcaacggtgaagatacaaaatcctcagattttg
aaggttattgcaatcctgatccgtaattctccacagtgtccagaaactctggaggtccgg
cgagcctttctctcagatatgattaaactgtttaataacagcagagaaaacaggaggagt
ttgttgcagtgctctgtctggcaggagtggatgctttccctttgttgttttaatccaaag
acttctgaggagcagaagataactgagatggtgtacaccatatttcggattttgctgtac
catgcaataaaatatgagtggggtggctggcgtgtgtgggtggatacactgtcaatcaca
cattcaaaggtcacttttgaaatgcacaaagagagtctttcccaaatgtacaaggagtac
caagagaaaggaggtgaagggagtggagtacattcttcaacaccaattagaacaatctct
gggattagcaaagaagctgaaaccaagggaaaacaacagtctttggagttaaaagaaaat
gctgctgctccttcctgcattactgatggtgatgcagagtgcagaactgaaaaaaaagag
aaagaaaactcatcagatggtggccaacaaactcattcagtgtctaatcataaggaggaa
ttaaagggggaggatttgagtactacagaggatttaaaagcagtgccttgtgtggaattt
tctccagaaccagaaacagtaaagcccactgtctcagaaatcagtactggaatagctgaa
gcaattgaagattctagcaaagctgatgagcttgtggaagaaacagttgctgtcactgct
gcttctttagccatgcaaactcctgtggaaggaggaactcccacaagtccagaaggattg
gaaaaatcagcagtagaggtggaagatgaagatgacttcgttgatttgaaagatgaaagt
agtttgcctttgccttcagacgagctttcagaagggaacaaggaatgtggctctaatgca
agtgaagtgacaaagcaggaagaaacaacagagaagcaacctgaaactgggcttttaaaa
tctgagggtactgaaggtgtggatgggaagaaacaagaactgactttaccagagacagtg
agttctgcagttctagaagttgtaactcatgaaaccaaaacaactgtggaaaacacaaat
gcacatgtggcagagccctctggagcctctgataaaagaattgccaagcttgatgtctcc
agtgttgcatcagatacagaaagactggagttgaaatctaacacatgtctagaagcacct
ctgccccccagatccatgcctgagccctcaaggcagcaggtttcctcaggacaggagctg
gctgctgcatcggatgggcagaggagggacacgaggtcacctgtgttccgtattcccgag
ttcaagtggtccctgatgcaccagcgcctgctcacagacctgctcttctccatagaaaca
gatatccagatgtggagaagccattctacaaaaactgtgatggactttgtgaatagcagt
gacaatgtggtgtttgtgcacaacacgatccacctcatctctcaagtgatggacaacatg
atcatggcctgtggtggtatcttgccgttgctttctgctgccacatctgctactcatgaa
ttggagaatattgagccaactcaagggctttcagtagaagcatctttaacatttctccag
agattaatcaaccttgtggatgtgctaatttttgcaagctctcttggtttcactgaaatt
gagtctgagaaaaatatgtcatctggaggaattctgcgacaatgtcttcgtctggtatgt
gcagtagcagtaagaaattgcttggagtgtcagcagcatgcacagatgaagcctattgga
gagactgggaggaaccaaaaagcagtgcaaggctttataggatcagtaaagtctccagca
aagagtccagtggacattgtgactggtggcatttctccaatacgggaccatgacagactt
ctgcaggatatggatattaatcgcctccgagcagtagtgttcagagatatagaggatagt
aaacaggctcagtttttggctttggctgttgtatattttatttctgtgctcatggtttca
aaatacagagatatactggaacctcagaatgaaagacgaccaccaaaccaaagccagtca
ctcaaggaatcagaaaatgaaaataatgaaactgctgctgcagttgtggaaaagccatct
gctgctcctggtgcttcaaccaatactgaagattcagaaaatatagcatctatgcaaaga
agggattctggtcttggggaggaagcaactctagcacaaacaaacaattcgagtggtgct
gctgaagcagggcctctgagtgttagtgcaggcccagatgcagtcagtgaagtcctgtgc
acgctctcattagaagtcaataaatctcaggagggcagaagtgagacaggaactgaagag
agtaaatctgtggcttctgtgccagctgcaaaaaatgtcaatgtgaaggacatcttgaga
agcctggtgagcacgccagctgatggccctgcagtggatgctgctcttctgcccccaacc
ttccttggagttcttggtgatggagctgctgagcagcctgtgcagttccattcctttgac
aggagtgttgttgtaccaacgaagaaatcaagtatttcctcttctacagctgctattggt
gctcctacaaatgctgtcagtgtggtttcttctttagattcagcccaagccccagatttg
tcaggagaatctcctggaagaggatcatctaattcaaaattgccatctgttcctgcagtt
tcttcagtgcctgaggattctgcctccaatatgagtattacagacaggcttgagcatgct
ttggaaaaagctgccccactgctgagagagatttttgtggattttgctccctttctttct
cggactcttttgggcagccatgggcaggagttgctgatagaaggtcttgtgtgcatgaaa
tcaagcagttcagttgtggagctggtgatgctcctttgctctcaggaatggcaaaactct
atacagaagaatgctggcctggcctttattgagcttgttaatgaaggaaggttgctgagt
caaaccatgaaggagcatctggtacgagtggctaatgaagcagagtttatcctgagcaga
cagagggcagaggacattaaccgccatgctgaatttgagtcactgtgtgcccagtactct
gcagacaaacgggaagaagaaaaaatgtgtcatcacttgatcacagcagccaagtaccgg
gaccaggtgactgcaacacaactaatacagaaaattatcaacatcctgacagacaagcat
ggagcctggggaagctctgcaccaagtcgtcctcgtgagttctggcgcctcgactactgg
gaagatgacttgcggcgccggcgacgatttgtgcgtaaccccctcggatcgacacatcct
gaagcgacactcagggcagccggagagcatgctcccgatgaggatatacttgtcaaagga
aagcagtccatcaagagtcaagttttaggaaaccagaactcagaaagcgagattctcttg
gaaggtgatgatgatatcatgtcattcatggaggaaagagaagtggagaacttgacaggt
ccagtgtccctcagcacaccagctcagcttgtggcaccctccgtagtagtgaaaggcacc
ctttccatcactctttctgagctctactttgaggtggatgaagaagatcctagttttaag
aaaatcgacccaaagattctggcatatacagaaggactccatggaaaatggctcttctca
gagattcggtctatcttttcccgacgttacctcttgcaaaatacagcactggaaatattc
atggcaaatagagtgggtgtcatgttcaacttccctgaccaagcaacagtaaagaaagtg
gttaactgtctacctcgggttggtattggtaccatctttggattaccccagaccagacgc
atttctttggctagtccacgacagatcttcaaagcttccaacatgacccagcgatggcag
caccgagagatttccaactttgaatacttgatgtttctaaacactatagcaggtcgaact
tacaatgatttgaatcagtaccctgtcttcccttgggttatcaccaactatgagtcagag
gagttggaccttacgcttcctagcaacttcagggatttgtcaaagcctattggagctttg
aacccaaagagagcagcgttctttgccgagagatacgaatcatgggaagacgatcaggtc
ccgaaatttcactatggcactcattattcaacagcaagttttgcactcacgtggttgtta
aggattgagcccttcacaacacttttcctaaatctgcaaggtgggaagtttgatcatgca
gataggactttttcgtctatttcaagagcgtggcgcaacagtcagcgtgacacttctgac
atcaaggaattgattcctgaattttattacctcccagagatatttgtcaacagcaacaat
tacaatctgggagtgatggatgatggaacagtggtgtctgatgttgaacttccaccatgg
gccaaaaccccagaagaatttgttcgcataaacagactggcattagaaagtgagtttgtc
tcctgccagcttcaccagtggattgatctgatttttggctacaaacagcaagggccagag
gctgttaggtccctgaatgtgttctactatttgacttatgaaggagctgttaatttaagt
tcaataacggattctgtactgagagaggctgtggaagctcaaatacgaagttttggacag
accccttcccaactgctcatagaaccacatcctccgagaagttctgccatgcaggtgtat
ctcctcctgcagagccccttgatgttcacagagcaagcccagcaggatgttatcatggtc
ctcaagttcccatccaactccccggtcactcacgtggctgccaacacccagcctggcctg
gccactcccgctgtgatcacggtcactgccaacaggctctttgctgtgaacaagtggcac
agcctccctggtgctgtacaagaccagccttaccagctgccagtggaaatcgatcctctc
atagccagcaatacaggtatgcacaggaggcaaatcactgaccttttagaccaaagcatt
caggtgcattcccagtgttttgtcatcacctctgacaatcgttacatcttggtctgtggc
ttctgggacaagagtttccgtgtttactctactgactcaggtaaactgatgcaagtagtg
tttggccactgggatgttgtgacctgtctggcccgttccgagtcctacattggagggaat
tgttacatcctctcaggatcccgggatgcaaccttgctgctctggtactggaatggcaaa
accaacattatcggtgataacccaagagctagtgattttgcatctcctcgagctgttctg
acaggacatgactatgagatcacctgtgctgccatttgtgctgagcttggtctggtaata
agtggttcaaaagaaggaccatgtctcatacattctatgaatggagatctactgaggacg
ttagaaggtcctgaaagattacaaggtcccgaaagctgcctgagaccaaaacttattcaa
gcttccagagaaggccactgtgtcatatattatgaaaatggcctcttctgtgtgttcagt
gtgaatgggaggctgcaggccacgatggaaaccgatgacaagataagggccattcagctg
agtcgggatggacagtatctgctcacaggtggagacaacggggttgtcatggtctggcag
gtgtgggacctcaaacggctctttgcttacccaggctgcgatgctgggatccgatccatg
gccctgtcctatgaccaaaggtgtataatgactggaatggcgtccgggagcatcgtggtt
ttttacaatgatttcaatcgctggcaccatgagtaccaaaccaggtactga
DBGET
integrated database retrieval system
