Geospiza fortis (medium ground-finch): 102041984
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Entry
102041984 CDS
T03755
Symbol
GTF2H1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03022
Basal transcription factors
gfr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102041984 (GTF2H1)
09124 Replication and repair
03420 Nucleotide excision repair
102041984 (GTF2H1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gfr03021
]
102041984 (GTF2H1)
03400 DNA repair and recombination proteins [BR:
gfr03400
]
102041984 (GTF2H1)
Transcription machinery [BR:
gfr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
102041984 (GTF2H1)
DNA repair and recombination proteins [BR:
gfr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
102041984 (GTF2H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
102041984
NCBI-ProteinID:
XP_005427245
LinkDB
All DBs
Position
Un
AA seq
562 aa
AA seq
DB search
MERDWSKVLLIVATMATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTVSHM
YADIKCQKISPEGKAKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRK
ANKELEEKNRMLQEDPVLFQLYKDLVVSQVISAEEFWANRLSLNAGDNSAAPSKQDVGIS
AAFLADVRPQTDGCNGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEREFWTRFFQS
HYFHRDRLNTGSKDLFAECAKLDEKGLKAMVSQGVKNPLIDLTALEDKTLDEGYGVASVA
STSNASKSARESSNAAIIKRFNHHSAMVLAAGLRKQEAQNDHYSETSSTDGNSRDSDFFQ
PPLKKVKLQEAIEYEDLSKNNSVKTIALNLKKSDRYYHGPTPIQSQQYATSQDIINSFQS
IRQEMEAYVPKLTQVLSSGDAASTIAVLSPGGALMQGGTQQAINQMVPNDIQSELKHLYV
AVGELLRHFWSCFPVNTPFLEEKVVKMRSNLERFQVTKLCPFQEKIRRQYLSTNLVSHIE
EMLQTAYNKFHTWQSRRMLKKT
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggaaagagactggagtaaagtgctgctcattgtagccacaatggcaacatcatctgaa
gaagtgctgctgatagtgaagaaggtgcgtcagaagaagcaggatggggccctgtacctg
atggccgaacgcattgcctgggctcccgagggcaaggaccgcttcaccgtcagccacatg
tatgcagacatcaaatgccagaaaatcagtccagaaggtaaagctaaaattcagctgcag
ctggtattgcatgcaggggacacaaccaacttccacttctccaatgaaagcacagcagtg
aaggagcgagatgcggtcaaggatcttcttcaacagctcttgcccaagttcaaaaggaaa
gctaataaagaacttgaggagaagaacagaatgctgcaagaagatcctgttttgtttcag
ctctataaagaccttgttgtgagccaagtaatcagtgctgaagaattctgggccaaccgt
ttaagcctgaatgcaggggataattctgcagcacctagtaagcaggatgtgggcatctct
gcagcattcctggctgatgtacggcctcagacagacggctgcaatgggctgaggtacaac
ttgacttcggatattattgaatccatatttcggacgtaccctgcagtaaaaatgaaatat
gcagagaatgttccacataacatgactgagagggaattctggacacgattttttcagtct
cattattttcatcgggacaggctcaatacaggctcaaaagacctctttgcagaatgtgcc
aaactggatgagaaaggcttaaaagcaatggtgtctcaaggagtgaaaaaccctctgata
gacttaacagctttggaagataaaacattagatgaaggctatggtgttgcttctgtggcc
tctacatcaaatgcctcaaagtctgctagagaaagcagcaatgctgccatcataaaacgc
tttaatcatcatagtgccatggtccttgcagctggcctcaggaaacaagaagcacaaaat
gaccattacagtgagaccagcagtacggatggaaactccagggattcagatttctttcag
ccaccactgaaaaaggtaaaactgcaggaggccattgaatatgaagatttatcaaagaat
aatagcgttaaaactattgcactaaacttaaagaagtctgataggtattaccatggtcca
actccaattcaatcacagcaatatgcaactagtcaggatataattaattcatttcagagt
attagacaagaaatggaagcatatgtacccaaactaactcaggttctttcaagtggtgat
gctgccagcactattgcagtcctgtcacctggaggagcacttatgcagggtggaacacag
caagccataaaccagatggtgccaaatgacattcagtctgaactaaaacatttgtatgtg
gcagtaggggaactgctacgacacttctggtcctgcttccccgttaacacgccattccta
gaagaaaaggttgtgaaaatgaggagcaacttggaaagatttcaggttacaaagctctgc
ccattccaagaaaagattcggagacaatatttaagcacaaatttggtaagtcatatagaa
gagatgctgcagacagcctacaataagttccacacgtggcagtcccggcgcatgctgaag
aagacgtga
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