Geospiza fortis (medium ground-finch): 102042008
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Entry
102042008 CDS
T03755
Symbol
SS18
Name
(RefSeq) SS18, nBAF chromatin remodeling complex subunit
KO
K15623
protein SSXT
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102042008 (SS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gfr03036
]
102042008 (SS18)
Chromosome and associated proteins [BR:
gfr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
102042008 (SS18)
GBAF(ncBAF) complex
102042008 (SS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
102042008
NCBI-ProteinID:
XP_005418346
UniProt:
A0A6I9HEM5
LinkDB
All DBs
Position
Un
AA seq
395 aa
AA seq
DB search
MLDENNHLIQCIMDYQNKGKTSECSQYQQMLHTNLVYLATIADSNQNMQSLLPAPPTQNM
PMGPGGMSQSGPPPPPRSHNMSSDGMVGGGPPAPHMQNQMNGQMPGPNHMPMQGPGPNQL
NMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNYGPRPNMNMQPNQG
PMMHQQPPSQQYNMPQAGGQHYQGQQPPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQQ
YSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYYE
GGNSQYGQQQDAYQGPPQQQGYPPQQQQYPGQQGYPGQQQGYGPSQSGPGPQYPNYPQGQ
GQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgctggatgaaaacaaccatcttatccagtgtataatggactatcagaataagggaaag
acttctgaatgctctcaataccagcagatgctgcatacaaacttggtttacttagccact
atagctgactccaaccagaacatgcagtctctactaccagcaccacccacacagaatatg
cctatgggtccgggcgggatgagtcagagcggccctcccccacccccgcgctcacacaac
atgtcttcagatggtatggtaggtgggggccctcctgcaccacacatgcagaaccagatg
aacggccagatgcctggacccaaccatatgcctatgcaaggacctggacccaaccagctc
aatatgacaaatagttccatgaatatgccttcaagtagccacggatccatgggtggctat
aatcactcagtgccatcgtcacagagcatgccagtgcagaatcagatgacaatgagccag
ggtcagccgatgggcaactatgggcccagaccaaacatgaatatgcaaccaaaccaaggt
ccaatgatgcaccagcagcctccctcccagcaatacaacatgccacaggcaggtggccag
cattaccaggggcagcagccaccgatgggaatgatgggccaagttaaccaaggaaatcac
atgatggggcagagacagattcctccatacaggccaccacagcaaggcccaccacagcag
tactcaggccaggaagactattatggggaccaatacagtcatggtggacaaggtcctcca
gaaggcatgaaccagcaatattaccctgatggtcataatgattacggttatcagcaaccg
tcgtatcctgaacaaggctacgataggccttatgaggattcctcacaacattactacgaa
ggaggaaattcgcaatatggtcagcagcaagatgcatatcaaggaccaccccagcagcag
ggttatccaccacagcagcagcaatatcccggccaacaaggctatccaggacaacagcag
ggttatggtccttcccagagtggtccagggcctcagtatcctaattatccacagggacaa
ggacaacagtatgggggatacagacccacgcagccggggccaccacaaccaccacagcag
aggccttatggatatgaccagggtcaatatggaaattaccaacagtga
DBGET
integrated database retrieval system
