Geospiza fortis (medium ground-finch): 102042132
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Entry
102042132 CDS
T03755
Symbol
TRMT13
Name
(RefSeq) tRNA methyltransferase 13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gfr03016
]
102042132 (TRMT13)
Enzymes [BR:
gfr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
102042132 (TRMT13)
Transfer RNA biogenesis [BR:
gfr03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
102042132 (TRMT13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRM13
zf-U11-48K
Methyltransf_32
OrgC
DUF1192
Motif
Other DBs
NCBI-GeneID:
102042132
NCBI-ProteinID:
XP_005422197
LinkDB
All DBs
Position
Un
AA seq
435 aa
AA seq
DB search
MAQPHGHEEEQNDRKRIPCPLDPKHTVYEDQLQKHLKKCNSREKPKPVYFVQDINAGLKD
VAEIPEKQVPLSSLSIEELQNLITRLKKASNGLELHLKEEILSHQALQEALSDPKNGESA
FKHLKQQASILGNMERLHLLGPGRCFVEFGAGRGKLSHWVDIALENVEGVQFLLVERATT
RFKVDGKHKRRDSIFERLQVDIQHLCLNKVPILEKKKLPVVGIGKHLCGAATDLALRCLV
ESYTTCCDGKNEEPAPKRCRAAQTEVAPHKSAGNESTTEDHKPVAGIVIALCCHHKCDWT
HYVGREFFKSVGLGPVEFHYFQRMSSWATCGMQETTGKASTSEDTEDQTHDTEEHEHTLS
RTASGSDTLQGILSVEERKELGCLCKRLIDHGRIEYLQQQGYKAALQYYTESAVSLENVL
LTAVPNPSVIPEPTI
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaccccacgggcacgaggaggaacaaaatgacagaaaaagaattccgtgccct
cttgatccaaaacacactgtatatgaagaccaactacaaaagcacttaaaaaaatgtaac
tcaagagagaagccaaagcctgtctactttgttcaagatattaatgctggtttaaaagat
gtagcagaaataccagaaaaacaagttcctctatcttctctatctatcgaagagctgcag
aatttaattaccaggttgaaaaaagcaagtaatggcctggaactccatcttaaggaagaa
atattgtcccaccaggctttacaagaagccttaagtgatccaaagaatggggaatctgct
ttcaaacacctgaaacaacaggcttctattttaggtaacatggaaagattgcatttactt
ggtccgggaaggtgttttgttgagtttggagctgggcgaggaaagctgtctcattgggtt
gatattgccttagagaacgttgaaggtgttcagtttttgcttgtggagagggcaaccaca
agattcaaggtggatggaaaacacaaaaggagagattctatatttgagaggcttcaagta
gacattcagcacttatgtttaaataaggtacctattttggagaagaaaaagttaccagtg
gtaggaattgggaagcatttgtgtggtgctgcaacagatcttgctttgagatgcttggtt
gaaagttacaccacttgctgtgatggaaaaaatgaagagcctgcaccaaaacgctgcaga
gctgctcagacagaggtggctcctcacaaatctgctggtaatgaaagcaccacagaagac
cataagcctgtagctggaattgttattgctctgtgttgccatcacaagtgtgactggaca
cattatgtaggcagagagttctttaaatcagtaggactaggaccagtagaattccattat
tttcagagaatgagtagttgggccacttgtggcatgcaagaaaccacaggcaaagcttct
acaagtgaagacactgaagatcaaactcatgacacagaagaacatgagcacacgctcagc
aggacagcaagtggttctgatactttacaagggatactgagtgttgaggagcggaaggag
ctgggctgcctctgcaaacggctgattgatcacgggcggattgagtatttacaacagcaa
ggatacaaggctgcactgcagtattatacagagtctgctgtgtccttggagaatgtcctg
ttgacagctgtcccaaatccttctgtgataccagagccaactatatga
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