Geospiza fortis (medium ground-finch): 102042149
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Entry
102042149 CDS
T03755
Symbol
RHBDL3
Name
(RefSeq) rhomboid like 3
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gfr01002
]
102042149 (RHBDL3)
Enzymes [BR:
gfr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
102042149 (RHBDL3)
Peptidases and inhibitors [BR:
gfr01002
]
Serine peptidases
Family S54: Rhomboid family
102042149 (RHBDL3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
EF-hand_1
EF-hand_6
DUF5580_M
EF-hand_11
EF-hand_8
AIF-1
EF-hand_9
Motif
Other DBs
NCBI-GeneID:
102042149
NCBI-ProteinID:
XP_014164427
LinkDB
All DBs
Position
Un
AA seq
442 aa
AA seq
DB search
MKKDVGNGIKXFGYFSVXIYFYSLLHVNVIALIPSFTLFPPLCXASQHWKALFDQKGSCS
SRQALKQQESSWDGAEVRKQAEMFDPDNTGYISTEKFRSLLQRHGSELDPHKLEVLLALA
DSNSEGRICYQDFVNLMSNKRSNSFRQAILQGNRRLCSKALLEETGLSLSQRLIRHVAYE
TLPREIDRKWYYDSYTCCPPPWFMITITIVEVAFFLYNGVVLDRFVLQVSHPLYLKNALL
YHPQLRAQAWRYLTYIFMHAGIEHLGLNVVLQLLVGVPLEMVHGAARISFVYVAGVVAGS
LAVSVADMRAPVVGSSGGVYALVSAHLANIVMNWSGMKCQFKLLRMAVALICMSFEFGRA
VWLRFHPSAYPPCPHPSFMAHLGGVMVGITLGVIILRNYEQRLQDQTLWWIFLSIYVIFV
LFAIFWNIFAYSLLDLKLPPPP
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggatgttggaaatggcattaaataatttggttatttctctgttngaatatac
ttctacagtttactgcatgttaatgtcattgctcttataccttcttttactctttttcct
cccttatgcnntgcctctcagcactggaaagccctatttgatcagaaaggtagctgttcc
agcaggcaggcactaaagcaacaggaaagcagctgggatggagcagaagtcaggaagcag
gctgaaatgtttgatcctgacaacactggctacatcagcacggagaagttccgctccctc
ctccagaggcacggctcggagctggacccccacaagctggaggtcctgctagccctggca
gacagcaactctgaggggaggatctgctaccaggacttcgtcaacctgatgagcaacaaa
aggtcaaacagtttccgccaggccatcctgcaggggaacaggaggctgtgcagcaaggcc
ctgctggaggagacggggctgagcctctcgcagaggctgatccggcacgtggcctacgag
accctcccgcgggagatcgaccgcaagtggtactatgacagctacacctgctgccccccg
ccctggttcatgatcaccatcaccattgtggaggttgccttttttctttacaatggagtg
gtcttagacagatttgtgctgcaagtcagccaccccttgtacctgaagaatgcattactg
taccatccccagcttcgggcccaggcttggaggtacctaacctacatattcatgcatgca
gggatagaacaccttgggctcaatgttgtccttcagctcttggttggggttcctctggaa
atggtgcacggagctgcgaggatcagttttgtgtacgttgcaggagttgtggcagggtcc
ctggcagtgtcagtggctgacatgagggcgccggtggtgggctcctctggaggtgtgtat
gctcttgtctctgctcacctggccaatattgtgatgaactggtcaggaatgaagtgccaa
ttcaaactgctgcgcatggctgttgccttgatctgtatgagctttgaatttggaagagcc
gtgtggctgcggttccacccctccgcttaccccccctgcccccaccccagcttcatggct
cacctgggaggggtgatggttggaatcacccttggtgttatcatcctgaggaactatgag
cagagactccaagatcagactttatggtggatcttcctttctatttacgtcatttttgtc
ttgtttgccatcttctggaatatttttgcctacagtctgttggatctaaagctacctcct
cctccttga
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integrated database retrieval system
