Geospiza fortis (medium ground-finch): 102042153
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Entry
102042153 CDS
T03755
Symbol
NTN1
Name
(RefSeq) netrin 1
KO
K06843
netrin 1
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
102042153 (NTN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
gfr00536
]
102042153 (NTN1)
Glycosaminoglycan binding proteins [BR:
gfr00536
]
Heparan sulfate / Heparin
Axon guidance molecules
102042153 (NTN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
DUF7630
Motif
Other DBs
NCBI-GeneID:
102042153
NCBI-ProteinID:
XP_005427923
LinkDB
All DBs
Position
Un
AA seq
567 aa
AA seq
DB search
MFRHLTGADLGKDPSPPEAGQGRGWLWLVLHDRKIKFELEHGLPRRCIPDFVNSAFGKEV
KVSSTCGKPPSRYCVVTEKGEEQVRTCHLCNASDPKRAHPPSFLTDLNNPHNLTCWQSDS
YVQYPHNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIHKSMDYGKTWVPFQFYSTQCRKM
YNKPSRAAITKQNEQEAVCTDSHTDVRPLSGGLIAFSTLDGRPTAHDFDNSPVLQDWVTA
TDIRVTFSRLHTFGDESEDDSELARDSYFYAVSDLPDGPRAKPFHYDRPWQRATAREANE
CVACNCNLHARRCRFNMELFKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDLSKPISH
RKACKECDCHPVGAAGQTCNQTTGQCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPAA
PPTTAASSAEEPADCDSYCKASKGKLKINMKKYCKKDYAVQIHVLKAEKNADWWKFTVNI
ISVYKQGSNRIRRGDQTLWIHSKDIACKCPKIKPMKKYLLLGNNEDSPDQSGIIADKTSL
VIQWRDTWARRLRKFQQREKKGKCKKA
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgttccggcatctcaccggggctgacttgggcaaggatccgtcccctcccgaggcagga
cagggccggggctggctgtggctggtgcttcatgacaggaaaatcaaattcgagttggag
cacgggctgccccgccgctgcatccccgacttcgtcaactcggccttcgggaaggaggtg
aaggtgtccagcacctgcgggaagccgccgtcgcggtactgcgtggtgacggagaagggc
gaggagcaggtccgcacctgccacctctgcaacgcctccgaccccaagcgcgcccacccg
ccctccttcctcaccgacctcaacaacccgcacaacctgacctgctggcagtccgacagc
tacgtccagtatccccacaacgtcaccctcaccctgtccctcggcaagaaattcgaggtg
acctacgtcagcctgcagttctgctcgccgcgccccgagtccatggccatccacaagtcc
atggactacggcaagacctgggtgcctttccagttctactccacgcagtgccgcaagatg
tacaacaagccgagccgcgccgccatcacgaagcagaacgagcaggaggcggtgtgcacc
gactcgcacaccgacgtgcggcccctctccggcggcctcatcgccttcagcaccctggac
ggccgccccaccgcccacgacttcgacaactcgcccgtgctgcaggactgggtgacggcc
accgacatcagggtgaccttcagccgcctgcacaccttcggcgacgagagcgaggacgac
tccgagctggcccgcgactcctacttctacgccgtgtccgacctccccgacggcccccgc
gccaagcccttccactacgaccggccctggcagcgagcgacggcccgggaggccaacgag
tgcgtggcctgcaactgcaacctgcacgcgcggcgctgccgcttcaacatggagctgttc
aagctgtcggggcgcaagagcggcggcgtgtgcctcaactgccggcacaacacggcgggc
aggcactgccactactgcaaggagggcttctaccgcgacctcagcaagcccatctcccac
cgcaaggcctgcaaagagtgcgactgtcaccccgtgggtgccgccggccagacctgcaac
cagaccacgggccagtgtccctgcaaggacggcgtcaccggcatcacctgcaaccgctgc
gccaagggctaccagcagagccgctcccccatcgccccctgcataaagatcccggccgcg
ccgcccaccacggccgccagcagcgccgaggagcccgcagattgtgactcgtactgcaaa
gcctccaaggggaagctgaagatcaacatgaagaagtactgtaagaaggactatgctgtc
cagatccatgttctgaaggcagagaagaacgcggactggtggaagttcacggtgaacatc
atctccgtctacaagcagggcagcaaccgcatccggcgcggcgaccagaccctgtggatc
cactccaaggacatcgcctgcaagtgccccaaaatcaagcccatgaagaagtatttgctg
ctgggcaataacgaggactctcccgaccagagcggcatcattgcagacaaaaccagcctg
gtgatccagtggcgggacacgtgggcccggcggctccggaagttccagcagcgggagaag
aaggggaagtgtaagaaagcctaa
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