Geospiza fortis (medium ground-finch): 102042172
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Entry
102042172 CDS
T03755
Name
(RefSeq) serine/arginine-rich splicing factor 5-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03040
Spliceosome
gfr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102042172
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
102042172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gfr03041
]
102042172
Spliceosome [BR:
gfr03041
]
Common components
Common spliceosomal components
SR proteins
102042172
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
Nup35_RRM_2
SET_assoc
OB_RNB
Motif
Other DBs
NCBI-GeneID:
102042172
NCBI-ProteinID:
XP_005417585
UniProt:
A0A6I9HCV3
LinkDB
All DBs
Position
Un
AA seq
277 aa
AA seq
DB search
MSGCRVFVGHLSSRARERDVEKFFKGYGRIREIHLKNGFGFVEFEDHRDADDAIYELNGK
ELCDERVTIEHARARRGRGRFSQRFSYYQSQSGSSRYGPPVRTEHRIIVENLSSRISWQD
LKDVMRKAGEVTYVDAHRNNRNEGVVEFASYSDMKSALEKLDGTELNGRRIKLTEDHRRH
RSRSRSRSYSRSRSRSRSTGSSRSDSRSRSRSRSRSRSRSRSRSRSRSRSRSRSRSRTPK
KSYSHKSHRSSLIASSPSPSSSKRKSRSRSSSAHSRS
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgagtggctgccgtgtctttgttggacacttgagctcccgtgctcgtgaacgggatgta
gagaagttcttcaagggatatggtcgcatacgagaaatccatctgaaaaatggatttggc
tttgtggaattcgaagaccacagggatgctgatgatgcaatttatgaactaaatggtaaa
gagctatgtgatgaaagggtcacaattgaacatgctcgagcccgaagaggaaggggaaga
ttctcacaacggttcagttattaccagtcgcagagtggatctagccggtatgggcctcct
gttcgtactgaacacaggatcattgttgaaaacctttcatcccgtatcagctggcaggac
ttgaaagatgtcatgagaaaggcaggagaggtcacctatgtggatgcacacagaaacaac
aggaatgaaggggttgtggagtttgcatcttacagtgacatgaagagtgctctggaaaaa
ctggatggcactgagctgaatggacgcagaattaaactgactgaagaccacagaaggcat
agaagcagatctcgatcaaggagttactcaagatctcgcagcaggtccaggtctacagga
tcttccagatcggacagccggtcccgctcccgctccaggtcccgctccaggtccaggtct
cgctctcgatcccgctctcgctctcgatcccgctctcgttctcgcagtcgtactcctaaa
aagagttactcccacaaaagccaccgctccagcttgatagcttcttccccctctccctct
tcttctaaaagaaaatctcgttctaggtcgagctctgctcacagccgtagttaa
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