Geospiza fortis (medium ground-finch): 102042176
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Entry
102042176 CDS
T03755
Symbol
HDAC9
Name
(RefSeq) histone deacetylase 9
KO
K11409
histone deacetylase 9 [EC:
3.5.1.98
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gfr03036
]
102042176 (HDAC9)
Enzymes [BR:
gfr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
102042176 (HDAC9)
Chromosome and associated proteins [BR:
gfr03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
102042176 (HDAC9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
102042176
NCBI-ProteinID:
XP_005418594
LinkDB
All DBs
Position
Un
AA seq
1099 aa
AA seq
DB search
MLQTIYESESCFSSDGVSGREQLLAQQRMHSMISSVDVKSEVPVGLEPISPLDLRTDLRM
MVPMVDPIMREKQLQQELLLIQQQQQIQKQLLIAEFQKQHENLTRQHQAQLQEHIKLQQE
LLAIKQQQELLEKEQKLEQQRQEQELERHRREQQLPPLRGKERGRERAVASTEVKQKLQE
FLLSKSATKDSPANGKNHSMSRHPKLWYTAAHHTSLDQSSPPLSGASPPYKYTLPGAQDA
KDDFPLRKTASEPNLKVRSRLKQKVTERRSSPLLRRKDGNVSSFKKRLFEVTESSVSSSS
PGSGPSSPSNGPTSSATENETSVLPSNIQAEHLVSQQRLLIQDESVNLLSLYTSPSLPNI
TLGLPAIQPQISASSSFKEKQKGETPPLRQGVALAGQYGGNIPPSSTHPHIAMEGKPNSS
HQALLQHLLLKEQMRQQKLLVTGAVPLHPQSPLAAKERVSPGIRASHKLPRHRPLNRTQS
APLPQSTLAQLVIQQQHQQFLEKQKQYQQQIHMNKMLSKSIEQLKQPGSHLEEAEEELHG
DHSMQEERAPASSASVRAESSSAGVDDRIGQQVGAVKVKEEPLDSDEDVQTQQMESGEQA
AFMQQEFLAHQHVHQLQIYQAQMATVGMAGSDKHRPLSRTPSSPTDSTLPHPDMDQPSQH
VYTTGVVYDSLMLKHQCMCGNYANHPEHAGRIQSIWSRLQETGLLNKCERIRGRKASLEE
IQLVHSEHHSLLYGTSPLNRQKLDPRKLLGNVSQKLFSLLPCGGLGVDSDTVWNELHSAG
AARMAVGCNLKASFEVTKGEMGNGFAVVRPPGHHAEESTAMGFCFFNSIAITAKYLRDKL
NIGKILIVDLDVHHGNGTQQAFYADPSILYVSLHRYDEGNFFPGSGAPNEVGSGPGEGYN
INIAWTGGLDPPMGDVEYLTAFRTVIMPAANEFDPEIVLVSAGFDAVEGHDPPLGGYKVT
AKCFGHLTKQLLKLADGRVVLALEGGHDLTAICDASEACINALLGNELEPLPEDIVHQIP
NMNAIASLKKTTEIQSKYWKSVEPYSVPVDCALAESQKQEREETETVSAMASLSVDVEQC
IPQEGSRAAGEPMEEEPAL
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagacaatttacgagagtgaatcgtgtttttcctcagatggggtttctggacgt
gaacagctcttggctcagcaaagaatgcacagtatgatcagctcagtggatgtgaagtcg
gaggttcccgtgggcctggagccgatctctccgttagacttgcggacggatctcaggatg
atggttcccatggtggacccgattatgcgcgaaaagcagctacagcaggagctgctcctg
atccagcagcagcagcagattcagaaacagctgctcattgcagagttccagaagcagcat
gaaaacctgacccgccagcatcaggcccagctccaggagcacattaagttacaacaggaa
ctactagccattaaacaacagcaagaactccttgaaaaagagcagaaactggagcagcaa
agacaagagcaggaactggagaggcatcgcagggagcaacagcttcctcccctccgaggc
aaagaaagaggacgagaaagggcagtggccagtacagaagtgaagcagaaacttcaagag
ttcctgttaagtaaatcagctacaaaagactctccagcaaatgggaagaatcattccatg
agccgtcaccccaagctctggtacacggctgcccaccatacctcactggatcaaagctct
ccacccctgagtggggcctcgccaccatacaaatatactttaccaggagcacaggatgct
aaggatgattttccacttcgtaaaacggcttcagagcccaatttgaaggtacgttcaaga
ttaaaacaaaaggtgacagaaaggagaagcagtcctttgctcaggaggaaggatggaaac
gtcagttcattcaagaagcgtcttttcgaggtgacagaatcctcagtcagtagcagctcc
cctggatcaggtcccagttccccaagcaatggtccgaccagcagtgcaacagaaaatgaa
acctcagttttgccatctaacattcaagctgagcacctggtttcccagcaacgccttttg
atacaggatgaatcagtgaacttgttgagtctgtacacatccccttctctgcccaacatt
accttgggacttccagcaatacaacctcaaatcagtgcttcgtcgtcattcaaagaaaag
cagaagggggagaccccaccacttagacaaggagtggccttggctggacagtatggagga
aacattcctccatcatcaactcatcctcacattgctatggagggaaagccaaacagcagc
caccaagctctcttgcagcatctgttactgaaagaacaaatgagacagcaaaaacttctt
gtgactggagcggttcctcttcatccacagtctcctttagcagcaaaggagagagtctca
cctggcataagagcttcccacaaactgcctcgtcacaggccactgaacagaacccagtct
gctcctcttcctcagagtactttggcccagctggtcatccagcagcaacatcagcaattt
ttggaaaagcagaaacagtaccaacagcagatccacatgaataagatgctctctaagtcc
attgagcagcttaagcagcctggcagtcacctggaggaagctgaagaagagcttcatgga
gatcactcaatgcaggaagagcgagctcccgccagcagtgccagcgttagggctgagagc
agcagtgctggtgtggatgacagaataggacagcaggtgggggctgtgaaagtcaaagag
gagccactggacagtgatgaggatgttcaaacccagcaaatggaatctggggagcaagct
gcttttatgcaacaggagttcctggcacatcagcatgtccaccagttgcaaatctaccag
gctcagatggctacagttggcatggcaggatcagataaacatcggccactttccaggacc
ccatcttcccccactgactccacattacctcacccagacatggaccagcccagccagcat
gtctacacaactggtgttgtgtatgacagtctgatgctgaagcaccagtgcatgtgtggg
aactatgccaatcaccccgaacacgctggacgaatccaaagcatctggtcaaggctgcaa
gaaactgggttgctaaacaagtgcgagcgaattcgaggtcgaaaagccagtctggaggaa
atacagctggttcactctgaacatcattcactgctgtatggcaccagcccactgaacaga
cagaagctggaccccaggaaactcctaggaaacgtgtctcaaaaactcttttccttgttg
ccttgtgggggacttggggtggacagtgacaccgtttggaacgagctgcactcggccggc
gcggcacgcatggcggtgggctgcaatttaaaagcaagttttgaggttaccaaaggggag
atgggaaatggctttgctgttgtaaggcccccaggccatcatgctgaagaatcaacagcc
atggggttctgcttttttaattcgattgcaattactgccaaatacttgagagacaagcta
aatataggcaagatattgattgtagatctggatgttcaccatggcaacggtacacagcag
gctttttatgctgaccccagcatcctgtatgtttccctccatcgctatgatgaaggcaac
ttcttccccggcagtggagccccaaatgaggttggaagtggccctggtgaagggtataat
ataaatattgcttggacaggtggcttggatcctcctatgggtgatgttgagtatctcaca
gcgttcaggactgtgatcatgccagctgccaacgagtttgatccagaaattgtcctggtg
tcagcaggattcgatgctgtggaaggccacgaccctccgctgggcgggtacaaagtcacg
gctaaatgttttggtcacctaaccaagcaattgctgaagctggcagacggccgcgtggtg
ctggcactggagggaggacatgaccttactgccatctgtgatgcctctgaagcctgtata
aatgccctcctaggaaatgagctggagcctctcccggaagatattgtgcaccaaatcccc
aatatgaatgcaatagcttctttaaaaaagaccactgaaattcaaagcaagtactggaag
tcagtggagccatactctgtgccagtggattgtgctctggctgagtctcagaagcaagag
agggaggagacagaaacagtatcagctatggcctctctttcagtggatgttgagcagtgt
attcctcaggaaggcagcagagctgctggtgagcccatggaagaagagccagccttgtga
DBGET
integrated database retrieval system
