Geospiza fortis (medium ground-finch): 102042188
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Entry
102042188 CDS
T03755
Symbol
LRP12
Name
(RefSeq) LDL receptor related protein 12
KO
K20050
low-density lipoprotein receptor-related protein 3/10/12
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gfr04131
]
102042188 (LRP12)
Membrane trafficking [BR:
gfr04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
102042188 (LRP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CUB
Ldl_recept_a
Motif
Other DBs
NCBI-GeneID:
102042188
NCBI-ProteinID:
XP_014163472
UniProt:
A0A6I9ZAN3
LinkDB
All DBs
Position
Un
AA seq
870 aa
AA seq
DB search
MQNKVSPVVAFKKPKAFGTLYSDEDKTDRNAICVAAFSHRNGALAEHSENVHISGVSTAC
GDIPEQIRSPSGTITSPGWPSEYPARINCSWYIHANPGEIITISFQDFDVQGSRRCSSDW
LTIGSYKNIEGFRACGSSIPSPYISSQDHVWIRFHSDDSISRKGFRLAYFAGKSDEPSCD
CDQFHCANGKCIPESWKCNDMDECGDNSDEEICAKANPPTASSFQPCAPNQFQCLSRFTK
LYTCLPESLKCDGNIDCLDLGDEIDCDVPTCGQWLKYFYGTFSSPNYPDFYPPGSNCTWL
IDTGDHRKVILRFTDFKLDGTGYGDYVKIYDGLEENPRRLLRVLTAFDSHAPLTVVSSSG
QIRVHFCADKVNAARGFNATYQVDGFCLPWEIPCGGNWGCYTEQQRCDGYWHCPNGRDET
NCTMCQRDEFPCSRNGVCYPRSDRCNYQNHCPNGSDEKNCFFCQPGNFHCKNNRCVFESW
VCDSQDDCGDGSDEENCPVIVPTRVITAAVIGSLICGLLLVIALGCTCKLYSLRMFERRS
FETHLSRVEAELLRREAPPSYGQLIAQGLIPPVEDFPVCSPNQASVLENLRLAVRSQLGF
TSIRLPIAGRSSNIWNRIFNFARSRHSGSLALVSADGDDVASQSTSREGERNNTHRSLFS
VESDDTDTENERRDTAGAVGGVAATLPQKVPPATAIEATVGACGSSSAQNSSSSSTDGAR
EVTSVEPPSTSPARHQLSSALSRMTQGLRWVRFTLGRSSSVNQNQSPLRQLDNGVSGREE
DDDVEMLIPVSDVASDFDMNDCSRPLLDLSSDQGPGLRQPYSAAHHSVRSCSRDGPCESC
GIVHTAQIPDTCLEATVKNETSDDEALLLC
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgcagaataaagtatcacctgttgtggcatttaaaaaacccaaagcatttgggacactc
tatagtgatgaggacaagaccgacagaaatgccatctgtgtggctgcctttagccacaga
aatggtgctcttgcagaacattctgaaaatgtgcatatttcaggagtgtcaacggcttgt
ggagatattccagaacaaattcgatcaccaagtgggacaatcacaagtccagggtggccc
tctgagtatcctgcccgaattaactgtagctggtacatccatgccaacccaggggagatc
attactataagctttcaagattttgatgttcagggatctcgacgatgcagctcagattgg
ttaacaattggaagctacaagaacattgaaggctttagagcatgtggctcttccattccc
tcaccatacatctcttcacaggatcatgtttggataaggtttcattcagatgatagcatc
tccagaaaaggcttcagattagcctactttgctgggaaatcggatgaaccaagttgcgat
tgtgaccagtttcattgtgctaatgggaagtgtattccagaaagttggaaatgtaatgat
atggatgaatgtggagacaactcggacgaggaaatctgtgccaaagctaatcctccgaca
gcttcttcctttcagccttgtgcacccaatcagttccagtgtctttcccgcttcaccaag
ctttacacttgccttccagaatctttaaaatgtgatggtaacattgattgtcttgacctg
ggagatgaaatagactgtgatgtgccaacatgtggacagtggttaaaatacttctatggt
actttcagttctcccaactatcctgacttctatccacctggcagcaactgcacctggctg
atagacactggtgatcatcgcaaagtaattttgcgattcaccgattttaaacttgatggt
acaggttatggagactatgtcaaaatatatgatgggttggaggagaatccacggagactg
ttgcgtgtactgacagcatttgactctcatgcccccctcacagttgtttcatcctcagga
cagataagagtgcatttttgtgctgacaaagtgaatgctgcaagagggttcaatgcaacg
tatcaagttgatggcttctgtttgccctgggaaatcccatgcggtgggaactgggggtgc
tacacagagcagcaacgctgtgacggctactggcactgtccaaatggaagggatgaaacc
aactgcaccatgtgccaaagagatgagtttccctgctctcgaaatggtgtttgctaccct
cgttcagatcgctgcaactaccagaatcattgccctaatggttcggatgaaaagaattgt
ttcttctgtcagccaggcaattttcactgtaaaaataaccgctgtgtgtttgagagctgg
gtttgtgattctcaagatgattgtggtgatggcagtgacgaagagaactgcccagtcatt
gtgcccactagagtgataactgcagctgtcattgggagtcttatttgtggattgctgctt
gtcattgcactgggatgtacttgtaaattgtactcactcaggatgtttgagcgaaggtca
tttgaaactcatttgtcaagggttgaggctgagctgttaagaagagaagctcctccatcc
tatggacaattaattgcccagggtttaattccaccagttgaagatttccctgtttgttcc
ccaaatcaggcttcagttctggaaaacctcaggctggcagtacgatctcagcttggattt
acctcaatcagacttcctattgctggcagatcaagtaacatttggaatcgaatttttaat
tttgcgaggtcacgtcattctgggtcgttggcattggtctcagcggatggagatgatgtt
gccagccaaagtactagtagagaaggtgaaagaaataatactcacagaagtttgttttca
gttgaatctgatgatacagacacagaaaatgaaagaagagacacagcaggagcagttggt
ggtgttgctgccaccttgcctcaaaaagtccctcctgcaacagcaatagaagcaacagtg
ggagcgtgcgggagttcctctgctcagaacagcagcagcagcagcacggatggtgcaaga
gaagtgaccagtgtagagcccccaagcacaagtcccgcacgccaccagctctcgagcgca
ctaagccgtatgactcaaggcttgcgctgggtacgctttactctagggagatcaagctca
gtgaatcagaaccaaagtcctttgagacagcttgataatggggtaagtggaagagaagag
gatgatgatgttgaaatgttaattccagtctctgatgtagcatcagactttgacatgaat
gactgttcaagacctctacttgatctcagctcagatcaaggaccagggcttagacagcct
tacagtgcagcacatcacagtgtaaggtcatgcagtcgagatggcccctgtgagagctgt
ggcatcgtacacactgcccagatacccgacacttgcttagaggcaacagtgaaaaacgaa
actagtgacgatgaggcattattactctgctag
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