Geospiza fortis (medium ground-finch): 102042248
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Entry
102042248 CDS
T03755
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6-like
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gfr04121
]
102042248
Enzymes [BR:
gfr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102042248
Ubiquitin system [BR:
gfr04121
]
Ubiquitin ligases (E3)
U-box type E3
102042248
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
102042248
NCBI-ProteinID:
XP_014164541
LinkDB
All DBs
Position
Un
AA seq
1369 aa
AA seq
DB search
MCLIFCEQIDDSSASISLAQLTKTANLAEANASEEDKIKAMMTQSGHEYDPVNYMKKPVG
PPPPSYTCFRCGKPGHYIKNCPTNGDKNFESVPRIKKSTGIPRSFMMEVKDPNTKGAMLT
NTGKYAIPTIDAEAYAIGKKEKPPFLPEEPSSSSEEDDPIPDELLCLICKDIMTDAVVIP
CCGNSYCDECIRTALLESEEHTCPTCHQTDVSPDALIANKFLRQAVNNFKNETGYTKRLR
KIQQQQQQQQQPGRPKSNCQPLMRPAMARQQDPLMIPLASLASRSALSSLGPGPSMAAGL
PVNPSSVVVSDLPPAVSLSLRGEKPDGPFRDADAVLPPALMTAAELSKSSPLSISSLLEE
KGYQVPVLRQPAIPSLLGPQGQSIPTTGHPMRAGALRRPGWELSNRGRPHSDRAQRTQAP
SLPASAPVFVPVPPPPLYPPPPHALPLPPGVPPPQFPPQFPPGQPPSAGYTVPPPGYPPA
PANMSSAWVPTAVPAAHSNTIPTTQAPPLSREEFYREQRRLKEESKSPYSASSYSRSSYT
YSKSRSGSSRSRSYSRSFSRSHSRSYSRSPPYQRRGKGKSRNSRSRSPPYRRYHSRSRSP
VFRGQSPTKRTVPQGEAEREYFNRYREVPPYDMKAYYGRSVDFRDPFEKERYREWERNYR
EWYEKFYKGYAVGAQPRPPVNRENFSPERFGPPGTRRENSPYARGRREEYPAGQSHRNRN
VAGNYPEKPGRESHGIKDPTKSKEKEVENPLGDGKGNKHKKHRKRRKGDENEGFPNVELL
EGARKPREPVPTEDAKTDSLFMLPSRDDATPVRDEPMEADSIAFKPVSEKEKKEKDKPKA
KVEKTKRKVEVAAAPKKDSVAKPAKASQEKVDPDREKSPRTEPPVKKVKEELPKTDSVKT
SSSQKDEKALGTPRKAHPKVTKDHPETRPAKEEKAKKEHPKEAKAEKPSGKEEKSKKPAE
KSKLSDAKLEKRKRKAEEKADKEHEATSAKAYKPESAELKTSPKGKAEPEGEKGERTPEK
DKAAFLNNPSKKIKLNRETGKKIVSGENVPPGKEAVEKPEPSSSKVKAEKTKGKARRKVT
AADGASSTLVDYTSTSSTGGSPVRKPEEKSDTKRTVIKTLEEYNNDITAPAEDVIIMIQV
PQSKWDKDDFESEEEDIKSTTQVPPAVGKPTSVIKPVSAKAPNPLKHTEKETEPLEKIQK
AAKETSYESTQHDAKSSKSSVSSEKGKTKDRDHSLSDKDSSEKRKSSVQPEKEHSERTAE
QGNGKTVSQSSKDGRSSEKHDSGRGSAAKDFTPNRDKKSDHDGSREHSSSKRRDEKSESA
RRKDSPSRIRDSTAGQKSKPREERAEPPKKGPAEAKRSSYSPPRERKPA
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttaattttttgtgaacagattgatgactcttctgcatctatttctctggcccag
cttactaagactgccaatctggctgaagccaatgcttccgaggaggataaaataaaagct
atgatgacacagtctggccatgaatatgatccagtcaattacatgaagaaacccgtgggg
ccacctccaccctcctacacctgttttcgctgtggcaaacctgggcactacataaagaac
tgtccaacaaatggggacaaaaatttcgagtctgttcccagaattaaaaaaagcacagga
attccaagaagttttatgatggaggtgaaggaccccaacacaaagggtgccatgctgacc
aacactgggaaatacgcaattccaaccatagatgcggaagcttatgctataggaaagaag
gagaagcctcccttcctacctgaggagccatcctcctcctcagaagaagatgatcctatt
ccagatgagctgttgtgtctcatttgtaaggatataatgacggatgcggttgttattccc
tgctgtggaaacagttactgtgatgaatgtattagaacagcactgctggagtccgaggaa
cacacatgccccacctgccatcagacagatgtttctcctgatgctttaatcgccaacaag
tttctgcgccaggctgtcaacaacttcaaaaatgaaaccggttacacaaaaaggctccgt
aagattcagcagcagcagcagcaacagcagcagcctgggaggcccaaatctaactgccag
ccgctgatgcggccggccatggcccggcagcaggacccgctcatgatcccgctggcctcg
ctggcctcccgctccgccctctcctccctgggccccgggccgtccatggcagctgggctg
cccgtcaatccgtcttctgtggttgtctccgatctccctccagcagtgtccctctctctc
cgtggggaaaagccagatggaccttttcgtgatgccgatgctgttttgcctcctgctctg
atgactgctgctgagctttccaaatcttcccctttgtcaatcagcagtttgttggaagag
aagggctatcaggttcctgtactgagacagccagcgataccaagtcttctgggccctcaa
ggacaatcaatacctacaactggtcatccaatgagagctggtgcacttcgcaggccaggc
tgggagctttcaaatcgaggacgcccgcacagtgaccgtgcccaaaggactcaggcccca
tcactgccagcatcagcaccagtctttgtgcctgtgcctccacctcccttgtatcctcca
ccaccccatgctcttcctcttcctccgggggtaccaccaccacagtttcctcctcagttt
ccacctgggcagcctccatccgctgggtacactgtcccccctcccggatatcccccagct
cctgcaaacatgtcatcagcttgggtcccaacagcagtgccagcggctcattcaaacacc
atcccaacgacacaagcacctcctctctctagggaggagttttacagagagcaacggagg
cttaaagaggagtccaagtctccctatagcgcttcatcttactctagaagctcatacacc
tactccaagtcacgctcaggttcgtcgcgctcccgctcctactcgcgctccttcagccgc
tcccactctcgctcctactcgcggtcgccgccctatcagagacgaggcaaagggaagagt
cggaactcccgctcccgctcgcccccgtacaggcgctaccactcccgctccaggtctccg
gtgttccggggccagtcccccaccaaacggacggtcccgcagggcgaggccgagcgcgag
tacttcaaccgctaccgagaggtgcccccgtacgacatgaaggcctactatggccgctcg
gtggacttcagagacccctttgagaaggagaggtacagagaatgggagaggaactacaga
gagtggtacgagaagttttacaagggctatgctgtgggcgctcaaccacggcctccagtg
aacagagagaacttctctccagaacggtttggcccacctgggacccgacgagagaattca
ccgtatgctcggggacggagggaggagtatcctgctgggcagagccacaggaatcgtaat
gtagctggaaactaccctgaaaagcctgggagagagagccatggcatcaaagatcctaca
aaatcaaaagagaaggaggtggaaaatccactgggggatggaaaaggcaataaacataaa
aaacaccggaagagaagaaaaggggatgagaatgaaggatttcccaatgttgagctgtta
gaaggggcaagaaaaccaagagagccagttccaacagaagatgctaaaacagactctcta
ttcatgctgccaagcagggatgatgccacccctgtaagggatgagcccatggaagcggat
tccattgctttcaaaccagtgtctgaaaaggagaaaaaagagaaggataagccaaaagca
aaggttgagaaaacaaagcggaaagtagaagtggcagctgctccaaagaaagacagcgta
gcaaagccagctaaagcttcccaggaaaaggtggaccccgaccgcgaaaaatctcctcga
acggaacctcctgtgaaaaaagtcaaggaagagctgccaaaaacagacagtgttaaaacc
tcttcctctcagaaggatgagaaggctcttggtacaccacggaaggctcatcccaaagtg
acaaaggaccacccagaaaccagaccagccaaggaggagaaggcaaagaaagaacatcct
aaagaagccaaggcagagaagccctccggcaaggaggagaagtcaaagaaacctgctgag
aaaagcaaactttctgatgccaaacttgagaaaaggaaaagaaaagcagaggaaaaggct
gataaagaacatgaggccacttctgcaaaggcctataaacctgaaagtgcagaattgaaa
acatcacccaaggggaaggctgagcctgagggggagaaaggagaacggaccccggaaaag
gataaagctgcttttcttaataacccgtccaaaaagattaaacttaaccgagaaactgga
aaaaagattgtgagtggagaaaacgtgccacctggaaaagaagctgtggagaaacctgag
cccagcagcagcaaagttaaagcggaaaagacaaagggaaaagcaaggaggaaagtgaca
gcagctgatggcgctagctcaactcttgtggattacaccagcacgagttccactggggga
agccctgtcaggaagcctgaggaaaagtcagacaccaaacgaactgtcattaagaccctg
gaggagtataacaatgacataacagcccctgctgaggatgtcattatcatgatccaggtc
cctcagtccaagtgggataaagatgactttgagtctgaagaggaagacatcaaatccacc
acccaggtgcccccagctgtaggaaaacccaccagtgttatcaaacctgtgagtgcaaag
gcaccaaaccccctcaaacacactgaaaaggagacagagcctctggagaaaatacagaag
gctgcaaaagagacaagttatgaaagtacccaacacgatgccaagagttcaaaaagttcc
gtgtcgagcgaaaaaggtaaaaccaaagaccgggatcattctttgtcagacaaggacagt
tctgagaagaggaagagcagtgttcagccagaaaaagagcactcagaacgcacagctgag
caaggaaatggaaaaactgtatctcagtcttctaaagatggcagatcttcagagaagcat
gacagtggccgtggctctgctgcgaaggacttcactcccaaccgggacaagaagtctgac
catgatggcagcagggagcattcaagttccaagcgcagagatgagaagagtgaatcagca
cggaggaaagactccccatcccggatcagagactccacagcagggcagaagagcaaacca
agagaggagcgtgcggagccacccaagaagggccctgcagaggccaagcggagcagctac
agccccccgcgggagcgcaagcccgcc
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integrated database retrieval system
