Geospiza fortis (medium ground-finch): 102042311
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Entry
102042311 CDS
T03755
Symbol
LINGO2
Name
(RefSeq) leucine rich repeat and Ig domain containing 2
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gfr04131
]
102042311 (LINGO2)
Membrane trafficking [BR:
gfr04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
102042311 (LINGO2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
Ig_2
LRRNT
V-set
LRR_9
LRR_LRWD1
Ig_C17orf99
LRRCT
C2-set_3
C2-set_2
Motif
Other DBs
NCBI-GeneID:
102042311
NCBI-ProteinID:
XP_005425066
LinkDB
All DBs
Position
Un
AA seq
606 aa
AA seq
DB search
MRHTALSCWQLFLGLAVLLVFTSPTAGCPARCECSAQNKSVSCHRRRLMSIPEGIPIETK
ILDLSKNRLKSVNPEEFTSYPLLEEIDLSDNIVSNVEPGAFNNLFNLRSLRLKGNRLKLV
PLGVFTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLE
QLTLERCNLTAVPTEALSHLHNLISLHLKQLNINALPAYAFKRLFRLKDLQIEAWPLLDM
LPANSLYGLNLTSLSITNTNLSAVPYSAFKHLVYLTHLNLSYNPISTIEAGMLSDLVRLQ
ELHMVGAQLRTIEPHAFQGLRFLRVLNVSQNLLETLEENVFHSSKSLEVLCINNNPLACD
CRLLWILQRQPTLQFGGEPPMCAGPDSVRERSFRDFHSTALSFYFTCKKPKIQDKKLQYL
VVEEGQTVQLMCNADGDPQPTISWVTPRRRLITTKSNGRATVLGDGTLEIRFAQDQDTGI
YVCIASNAAGNDTYSASLTVKGFTSDRFLYANRTPMYMTDSNDTSSNGTNANSYSLDLKT
ILVSTAMGCFTFLGVVLFCFLLLFVWSRGKGKHKTSIDLEYVPRKNNGAVVEGEVSGPRR
FNMKMI
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcacacagctctatcatgctggcagctgttcctgggtctggctgtgctgcttgtc
ttcacaagccccactgcgggctgcccagcccgctgtgaatgctcagcgcagaacaagtct
gtcagctgtcaccgaagacgtctgatgtccatcccagaaggcatccccattgagaccaaa
atcttggacctcagcaagaaccgactgaaaagcgttaaccctgaggaattcacatcatac
ccgttgctggaggagattgacctcagcgacaatattgtctccaatgttgagcctggagct
tttaacaatctcttcaacttgcgctccttgaggctgaaaggaaaccgtctgaagctggtt
ccccttggggtgttcactgggttgtcaaacttaacaaagcttgatataagtgaaaacaag
attgtcattttgctggactacatgtttcaagatctacataacctaaaatccctggaggtt
ggggacaatgatttggtgtatatatcacacagggccttcagtgggctgcttagcctggag
cagctcaccctggagagatgcaacctcacagccgtaccaacagaagctctttctcacctc
cacaacctcatcagcctgcatttgaaacagctcaacattaatgctttgccagcgtacgcc
tttaaaagactgtttcgcctgaaggacctgcagatagaggcctggcccctcctggacatg
ctgcctgccaacagtctgtatggtctcaacctgacttctctatccatcacaaacaccaac
ctgtctgcagtaccttactctgcttttaaacatctggtttacctgacacatctcaacctc
tcttacaaccccatcagcaccatcgaggcaggcatgctgtcggatttagtgcgcctgcag
gagctccacatggtgggggcacagctgcgaaccattgaaccacatgcattccaagggctc
agattcttacgtgtgcttaacgtgtcccaaaacctgttagaaaccctagaagagaatgta
ttccattcctccaaaagcctggaggtcctctgcattaacaacaaccctctggcctgtgac
tgtcgtcttctttggattttgcagcggcagcccaccttgcagtttggtggtgagccacca
atgtgtgctggcccagacagtgtcagagagaggtcattcagagacttccacagcacagct
ctctccttttatttcacctgtaagaagcccaagatacaagacaagaagttgcagtacctg
gtagtggaggaaggacagaccgtgcagctgatgtgcaatgctgatggggacccacagcct
accatctcctgggttactccacgcaggaggctgatcacaactaaatcaaatggtagagcc
actgtgctgggagatggcactctggagatccgatttgcccaagaccaggacactgggatc
tatgtctgtattgcaagtaacgcagctgggaatgacacctactcggcctccctgacagta
aaggggtttacttcagaccgtttcctttatgccaacaggacccctatgtatatgacggac
tccaacgacacaagttctaacggaactaatgcaaacagctactctctggaccttaagaca
atattggtgtccacagctatgggctgtttcacattccttggagtggttttattttgtttc
cttcttctttttgtgtggagccgagggaaaggcaaacacaaaaccagcattgaccttgaa
tatgtccctcgcaaaaacaatggtgctgtggttgaaggggaggtttctggaccacgaagg
ttcaatatgaaaatgatttga
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