KEGG   Geospiza fortis (medium ground-finch): 102042339
Entry
102042339         CDS       T03755                                 
Symbol
LARP1
Name
(RefSeq) La ribonucleoprotein domain family member 1
  KO
K18757  la-related protein 1
Organism
gfr  Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gfr03019]
    102042339 (LARP1)
Messenger RNA biogenesis [BR:gfr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     102042339 (LARP1)
SSDB
Motif
Pfam: LARP1_HEAT La
Other DBs
NCBI-GeneID: 102042339
NCBI-ProteinID: XP_014167706
LinkDB
Position
Un
AA seq 1036 aa
MCRLVFSLPHIPLPFSFVLDLCPVLHCLFRARRLGNAAQLLGADSLALVAGLQCLLLLQL
PVPDCQPRDIFPADGQSELTTPAKVVRAANPRQRKGSKVGDFGDATNWPTPGEIAHKSVQ
QPHKAPSLRKVPVKKDMKEQEKGDGSDGKESLKTKSDESGEEKNGDDDNQKSAQKKKGNK
HKWVPLQIDMKSEVPRDKTASRNNRQNEQHRHPSNNRSELKGWHPDNKHERSWQDHDETS
SVKSEGGAVRGTFRGRGRGRGRGRGRGRGGHFDYQYGYRKFEGSDGSRTQKYASNITYYF
DNISSAELYSVDQELLKDYIKRQIEYYFSVDNLERDFFLRRKMDSEGFLPITLIASFHRV
QALTTDISLIIKALKDSKVVEIVDEKIRRKEQPEKWALPGPPMADYTQTDFSQFINCPEF
VPRQSFQKETESAPGSPRPASPVPTKTEEVSNLKTMPKGLSTSLPDLDSETWIEVKKRPR
PSPARPKKPEESKTPQQQKQKDQDEPEELDFLFDEEMEQMDGRKNTFTDWSDEDSDYEID
DRDVNKILIVTQTPPYLRRHPGGDRTGNHTSRAKMSSELAKVINDGLYYYEQDLWTEQFE
PEYSQIKQEVENFKKVNMISREQFDTLTPEPPVDPNQEVPPGPPRFQQVPTDALANKLFG
VPEPSTIARSLPTTVPESPNYRNARTPRTPRTPQLKDPTQTPRFYPVVKEGRTIDAKVGP
GWAGGQELGXSQLGPEEEGSTSVMLRVLQTPRKRKTRHSSNPPMECHVGWVMDSREHRPR
TASISSSPSEGTPAVGSYGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRRRCLNERKRL
GIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLAVEDGKEGYRYGLECLFRYYSYGLEK
KFRPDIFKDFQEETIKDYEAGQLYGLEKFWAFLKYSKAKNLDINSKLQEYLSKFKRLEDF
RVDPPMGEEGGHKRYPTTSGGDGRKRYPSQSSSKTVSQCPSSQAHASPSQPAQEDAKNLS
QQSPAPSAAESQTVGK
NT seq 3111 nt   +upstreamnt  +downstreamnt
atgtgccgcttagtgttttccctcccccacatacctttgcccttcagctttgtgctggac
ctttgccctgttctgcactgtttgtttcgggcaagaaggctggggaatgcagcgcagctc
ctgggagctgactcactggccctggttgctgggcttcagtgcctgcttctgctgcaactt
ccagttccagattgccagcccagggatatatttccagctgatggccagtctgaacttaca
actccagcgaaagtggtgagggctgccaacccgagacagaggaaaggaagcaaggttggt
gactttggtgatgccacaaattggccaacacctggagaaatagcccacaagagtgtgcag
cagccacacaaagcgccgtcccttcggaaggtgcctgtcaagaaagacatgaaagagcag
gaaaagggagatgggagcgatggcaaggagagcctgaaaaccaaatctgatgagtctggg
gaggagaagaatggtgatgatgacaaccagaagtcagcccagaagaagaaaggcaacaaa
cacaagtgggtccctctgcagatagacatgaagtcagaggtgcccagggacaaaacagcc
tctcggaacaaccggcagaacgagcagcacaggcacccctccaacaaccgcagcgagctc
aaaggctggcaccctgacaacaagcacgagcgcagctggcaggaccacgacgagacgtcc
agcgtgaagagcgagggaggcgccgtgcgaggaaccttccggggccggggccgcggccgg
ggcaggggcaggggccgtggcagaggagggcactttgactaccagtatgggtaccggaaa
ttcgagggctcggacggctcccgcacccagaagtacgccagcaacatcacctactacttt
gacaacatcagcagtgctgagctctacagcgtggaccaggagctgctcaaggactacatc
aagaggcagatagaatattacttcagcgtggacaacctggagcgggatttcttcctgcgg
cgcaagatggactcggaggggttcctgcccatcacgctgatcgccagcttccaccgcgtg
caggcactcaccactgacatcagcctcatcatcaaggctctgaaggacagcaaggtggtg
gaaatcgtggatgagaagatcaggagaaaagagcagccagaaaaatgggctctgcctggc
cctcctatggcagactacacacagacagacttctcacagttcatcaattgccccgagttt
gtgccccggcagagcttccagaaggagactgagtctgctccaggctccccacgtcctgcc
agcccagtccccaccaaaacagaggaggtcagtaacctgaagacaatgcccaagggtttg
tccacaagtctgccagacctggattcagagacatggattgaagtgaagaagagaccccga
ccttccccagccaggcccaagaaaccagaggagtcaaagacaccgcagcagcagaagcaa
aaggaccaagatgagcctgaagagctcgacttcctctttgatgaggagatggagcagatg
gacgggcgcaagaacaccttcactgactggtcagacgaggactctgattacgagatcgac
gaccgcgacgtgaacaagatcctcattgtgacccagacccccccgtacctgcgccgccac
cccggcggggacaggactggcaaccacacctccagggctaaaatgagctcagagctggcc
aaggtgatcaatgatgggctctactactacgagcaggacctgtggacagagcagtttgag
ccggagtattcgcagatcaagcaagaggtggagaacttcaagaaggtgaatatgatcagc
agggagcagtttgacaccctgaccccagagccccccgtggatccaaaccaggaagttcct
cctggtccccccaggttccagcaagtacctacagacgctttggccaacaagctcttcgga
gtccctgagccctccaccatcgcccgctctttgcccacgaccgtcccagaatcgcccaac
taccgcaacgcccggacgccgcgcacaccgcgcacgccgcagctcaaggaccccacgcag
acgccccgcttctaccccgtggtgaaagagggcaggacgatagatgccaaggtgggacca
ggctgggctgggggacaggagctggggnnctcccagctggggcctgaggaggaagggagc
acatctgtgatgctccgtgtcttgcagactccacggaagaggaagacgaggcacagttcg
aaccctcccatggagtgccacgtgggctgggttatggactccagggagcacaggcccagg
actgcctccatcagctccagcccctcggaggggaccccagctgttgggagctatggctgc
accccgcagtccctgcccaagttccagcatccctcccacgagctgctcaaggagaacggc
ttcacacaacacgtctaccacaagtaccggcggcgctgcctcaacgagcgaaaacgactg
ggcattggtcagtcccaggagatgaacacgcttttccggttctggtccttcttcctccga
gatcacttcaacaagaaaatgtatgaggagttcaagcaactggctgtggaggatgggaag
gagggatacaggtacggtctggagtgccttttcagatactacagctacgggctggagaag
aaattccggccagacatatttaaggacttccaagaagagaccatcaaggattatgaagct
gggcagctctatgggctggaaaagttctgggccttcttaaaatattccaaagccaaaaat
ctggacattaacagcaaactgcaagaatacctcagcaagttcaagcgcctcgaggacttc
cgagtagatccacccatgggggaggaaggtggacacaagagataccctacgacgtcaggg
ggagatggcaggaagcgctacccatcccagtcttccagcaaaacggtcagccagtgccca
tccagccaagcccacgcctcacccagccagcctgcacaagaggatgccaaaaacctgagc
cagcaatcccctgccccatcagctgcagagtcgcagacagtggggaagtag

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