Geospiza fortis (medium ground-finch): 102042342
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Entry
102042342 CDS
T03755
Symbol
CAPN3
Name
(RefSeq) calpain 3
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102042342 (CAPN3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gfr01002
]
102042342 (CAPN3)
Enzymes [BR:
gfr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
102042342 (CAPN3)
Peptidases and inhibitors [BR:
gfr01002
]
Cysteine peptidases
Family C2: calpain family
102042342 (CAPN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Calpain_u2
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_5
EF-hand_8
CAPN13-like_C_EFh
EH
Motif
Other DBs
NCBI-GeneID:
102042342
NCBI-ProteinID:
XP_005419457
LinkDB
All DBs
Position
Un
AA seq
809 aa
AA seq
DB search
MPTAINAAVAQRTAAGSVPSTTAGTTEGAGGGTGGIYSAIISRNQPIIHVKEKTYEELHK
KCLEKNILYEDPDFPANESSLFYSQKSPVKFEWKRPREICENPRFIIGGANRTDICQGEL
GNCWFLAAIACLTLNKKLLCRVIPHDQSFIQNYAGIFHFQFWRYGDWVDVVIDDCLPTYN
NQLVFTKSSQRNEFWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFYEIKDAPK
DIYKIMKHAIDRGSLMASSIDDDLGFCYGSAPRSNIGELIARMVKNQENAQMTQSTVDYQ
GIEERPAWTIMPMQYETRMSCGLVKGHAYSVTAVEETVFKGEKIRLVRLRNPWGQVEWNG
AWSDKSEEWDSVNEEEKIRLQHKVVEDGEFWISFQDFMRHFTKLEICNLTPDALEVDKFQ
TWTVSVNEGRWVRGCSAGGCRNYPDTFWTNPQYRLKLLEEDDDPEDEEVICSFLVALMQK
NRRKERKLGANLYTIGFAIYEVPKEMHGTKHHLQKDFFLYNASKARSKTYINMREISERF
RLPPSEYVIIPSTYDPHQEGEFILRVFSEKRSLSEEVENMIEAERPLKKKGKPIIFVSDR
ANSNKELTADENSGKDGEKTQADEKKRSSTKAHEESEEQKQFRNIFRQIAGDDMEINAEE
LRNVLNNVVKKHKDLRSEGFELESCRSMIALMDTDGSGKINFDEFRHLWDKIKSWQKIFK
RYDTDHSGTINSYEMRNAVNDAGFRLNNQLYDIITMRYADKNMNIDFDSFICCFVRLDAM
FRAFHAFDKDGDGIIKLNVLEWLQLTLYA
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccgccataaatgcagcggtggctcagcgaacagctgctgggtcagtccccagc
accactgctggcactacggagggggcaggagggggcacagggggcatttattctgccatt
ataagtcgcaatcagcctattatccacgtaaaggagaagacatatgaagagcttcacaag
aagtgtctggagaaaaacatcctctatgaagatcctgatttccctgcaaatgagtcgtcc
cttttctacagccagaaaagccctgtcaagttcgaatggaaaagaccacgtgaaatctgt
gagaatccacggtttatcattggtggagccaacagaacagatatctgccaaggagaatta
ggtaactgctggtttctggctgccattgcttgcctgacactgaataaaaaactactctgt
agagtcattcctcatgaccagtcctttatacaaaactatgccggtatctttcacttccag
ttctggcgctatggagactgggtggatgtcgtcatcgatgactgcttacccacctacaac
aaccagctggtctttaccaagtcctcccagcgcaacgagttctggagcgccctcctggaa
aaggcctatgcaaaactccatgggtcatatgaagctttgaagggaggcaacaccactgaa
gccatggaggatttcaccggaggagtcacagagttctatgagataaaggatgcccctaaa
gatatctataaaatcatgaaacatgccattgacagaggatccctcatggccagttccatt
gatgatgacctaggcttttgctatggatcagctcctcggagcaacattggggaactgatt
gctcgcatggtgaagaatcaagaaaatgcacagatgactcagtccactgtagactaccag
ggcatcgaggagaggccagcctggaccataatgccgatgcagtacgagacacggatgtcc
tgcgggcttgtcaaagggcacgcctactctgtgacggccgtggaagagacagtatttaaa
ggggaaaaaatacgtctggtaaggctgagaaacccctggggccaggtggaatggaatgga
gcctggagtgacaagtcagaggagtgggactctgttaacgaagaagagaaaatccgcctg
cagcacaaggttgtggaggatggggagttctggatatcatttcaagatttcatgaggcac
ttcacaaagcttgagatctgtaacctcacacctgatgctctggaagtcgataaattccag
acctggaccgtgtcagttaatgaaggacgctgggtgagaggctgctcagctggaggctgc
cgcaattatccagatacattttggaccaatccccagtatcgcttgaagctcctggaggaa
gatgatgatcctgaggatgaagaggttatctgcagcttccttgtcgcactcatgcagaaa
aacaggaggaaagagcgcaagctgggagccaacctgtacaccattggctttgccatctat
gaggtgcccaaagagatgcatggtactaagcaccacttgcagaaggattttttcctctac
aatgcctccaaagctagaagtaagacctacataaacatgcgagaaatctctgagcgcttc
cggttacctcccagcgagtacgtcatcatcccatcgacatatgacccccaccaggaggga
gaattcatcctcagggtcttctcagagaaaagaagtctttcagaggaggttgaaaacatg
attgaggcagaacgtccattgaagaaaaagggcaagcctatcatcttcgtttctgacaga
gcaaacagcaataaggagctgacagcagatgaaaattctggcaaagatggtgaaaaaacc
caagcagatgagaaaaagcgttcttcaacaaaagctcatgaggagagtgaagagcaaaaa
cagttcaggaatattttccgacagattgcaggggatgacatggagatcaatgctgaggaa
cttaggaatgttctcaataatgtcgtaaaaaaacataaggacctaaggtcagaagggttt
gaattggaatcctgccgcagcatgattgctttaatggatacggatggctcagggaagata
aactttgatgaatttcgacatctctgggacaagattaaaagctggcagaaaattttcaag
cgctatgacacagatcattcaggaaccattaacagctacgagatgcgcaacgcagtcaat
gatgcagggtttcggctgaacaaccagctctacgacatcatcaccatgcgctatgccgac
aagaacatgaacattgattttgacagcttcatctgctgcttcgtgcgcctggacgccatg
ttccgggcattccacgcctttgacaaagatggagatggcatcattaagctcaatgtcttg
gagtggctgcagctcacgctctatgcgtaa
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integrated database retrieval system
