KEGG   Geospiza fortis (medium ground-finch): 102042379
Entry
102042379         CDS       T03755                                 
Name
(RefSeq) toll-like receptor 13
  KO
K18808  toll-like receptor 13
Organism
gfr  Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:gfr04054]
    102042379
Pattern recognition receptors [BR:gfr04054]
 Membrane-bound pattern recognition receptors
  Toll-like receptors
   102042379
SSDB
Motif
Pfam: LRR_8 LRR_4 LRR_1 TIR TIR_2 LRR_5 LRR_14 LRR_9 LRR_LRWD1 LRR_6
Other DBs
NCBI-GeneID: 102042379
NCBI-ProteinID: XP_005431278
LinkDB
Position
Un
AA seq 998 aa
MCTPPLVTLVTLVMVPAGVFPYNCIQAPWDPGLFRCIQRFLSTVRAAVGDLPSTATSLNL
SVNILRQVPPSAFAHLPQLYTLDLTHNQLELLAPGAFSGLSALAHLDLAHNNISVLATGV
FTGLGNLSTLRLDHNPLQKVAPRAFQPLPAPSRLWLRGGRLSALEPVAMAVGNLTHLDVL
DLCDNMLSTLGPGLPPTLRVLYLCNNSLGALSGATPEVIPPGLRVLDLSYNNISDPALLS
HLCLNNLTHLHLAGNLLDVVQLLRVAGISPRQVDVSGLQVNTSGLEYLCKQLRGQRLQKL
QLQRMNITSMPNRALAKCPVLGALDVSGNRLRDLGCIGPLRQLRLDVNGLARLHRAALRG
LRNLRHLRLDNNLLTDLLPGSFADLHQLEDLNLRNNRVAVLFPGTFKGLDRLQTLDLGGN
KLRHLAAKAFQGLPRLCRLYLDRNRLLEVRVAASQPVQVTLGVLDLRANALRYLSRHLRQ
LPPFRYLRNLYDLKLQAQQPYGMRVVPQRFFQGLSALRSLYLSQNSLSAIPADAFDDLAQ
LRYLTLADSSNGMGHLPAGIFKNLSQLRSLNLESAGLRSLGPEVFGNLTRLKELRLAKNE
LRTLDVTLATHLPALRYLDLRKCPLSCSCANAWLPAWLARGPVQVVYLYNYTCGEVGGAS
TYLHCFDTFVCYLDMGRYLFAGTAPAVLLLLVLPLLHHRGYWRLRYQLFLLRAWARGHWR
REQRRYTYDTFVSYNSGDERWVLEELVPELERGALRLCLHHRDFRPGRAIVDNIVDAVYN
SRHTVCVVSRGYLRSEWCSLEIQMASYRLFDELRDVLVLIFLEDIPEAELSAFHRMRRVL
LRRTHLRWPSEPPAQPLFWAKLRCALSGGEEEEERERGDREEGPATSGTPGEVLPQERNL
LPQNHCFLSEEGVLWSGADGSKEEEENEERKMGDREGGCPDSTGTTVELLREVRDVGDQP
AVVALHLFTPHGLITMRKNRKVWLNGVPTPCPRSSRDR
NT seq 2997 nt   +upstreamnt  +downstreamnt
atgtgcactccaccgctggtgacactggtgacactggtgatggtgcctgcaggggtcttt
ccctacaattgcatccaggcaccatgggaccctgggctgttccgctgcatccagcgcttc
ctgagcaccgtgagggctgcagtgggcgacctcccctccactgccacatccctcaacctc
tctgtcaacatcttgcgccaggtgccccccagtgcctttgcccacctgccgcagctctac
acccttgatctgacccacaaccagctggaactcctggccccaggggctttctcagggctg
tcagcactggctcacctagacctggcccacaacaacatctcagtgctggccacaggtgtg
ttcaccgggctgggcaacctgagcacactgcggctggaccacaatccgctacagaaggtg
gccccgagggctttccagccgctgcctgcccccagcaggctctggctgcggggtggccgg
ctcagcgcactggagcctgtggccatggctgtggggaatctgacacacctagacgtgctc
gacctgtgtgacaacatgctgtcaacactgggcccggggctgccgcccacactgagggtc
ctgtacctctgcaacaactccctgggagctctttcaggggccactcctgaggtgataccc
ccagggctgcgtgtgctcgacctgtcctacaacaacatctcggaccctgccctgctctct
cacctgtgcctgaacaacctgacacacctgcacctggctgggaacctgctggacgtagtg
cagctgctgcgcgtggctggaatctccccacgtcaggtggatgtgtcagggctacaggtg
aacacaagtggcctagaatacctgtgcaagcagcttagaggacagaggctgcagaagctg
cagctgcagcgcatgaacattacatcaatgcccaacagggctctggccaagtgtccagtg
ctgggtgccctggatgtgtctggcaatcggctgcgggatttgggctgcataggacccctg
cggcagctgcggctggatgtgaatgggctggcacggctgcaccgcgcagcactgcgtgga
ctccgcaacctgaggcacctgcgccttgacaacaacctgctcactgacctcctgcctggc
tcctttgctgatctgcaccagctggaagacctcaacctgcgcaacaaccgtgtggccgtg
ctcttccctggcaccttcaagggacttgaccgtctgcagacccttgacctgggcgggaac
aagctgcggcacttggcagccaaggcattccagggcctcccgcggctttgccggctttac
ctggaccgcaaccggctgctggaggtgagggtggctgcatcccagccggtgcaggtgaca
ctgggcgtgctggacctgcgtgccaatgcgctgcgctacctgagccgacacctgcggcag
ctgccacctttccgctacctgcgtaatctctatgacctgaagctgcaggcgcagcagcca
tatgggatgcgtgtggtcccacaacgcttcttccagggcctcagtgccttgcgctcactc
tacctgtcacagaactcactctcagccatccctgctgatgccttcgatgacctggcacag
ctgcggtacctgacgctggctgacagcagcaacgggatgggccacctgcctgccggcatc
ttcaagaacctgagccaactgcgcagcctgaacctggagagcgcaggactgcgcagcctt
ggccctgaggtctttggcaacctgacacgactgaaggagctgcgcctggccaagaacgag
ctgcgtacattggatgtgactctggccacccacctccctgccctgcgctatctggacctg
cgcaagtgcccactgagttgcagctgtgccaatgcctggctgcctgcctggctggcacgt
gggccggtgcaggtggtctatctgtataactacacatgtggtgaggtgggtggggcctcc
acatacctgcactgctttgacacgtttgtgtgctacctggacatggggcggtacctgttt
gcagggacagcaccggctgtgctgctgctgctggtgctgccactgctgcaccaccgtggg
tactggcggttgcgctaccagctgttcctactgcgtgcctgggcacgtgggcactggcgg
cgggagcaacggcgctacacatacgacacctttgtgtcctacaactccggggatgagcgg
tgggtgctggaggagttggtgcctgagctggagcgtggagccttgcggctctgcctgcac
caccgtgactttcgccccggccgcgccatagtggacaacatcgtggacgctgtgtacaac
agccggcacacggtgtgtgtggtgagccgcgggtacctgcgcagcgagtggtgttcactg
gagatccagatggccagctatcgcctcttcgatgagctgcgcgatgtccttgtcctcatc
ttccttgaggacatccctgaggccgagctctcggccttccatcgcatgcgccgtgtgctg
ctgcggcgcacacacctgcgctggccctctgagccccctgcacagcccctcttctgggca
aagctcaggtgtgccctgagcgggggggaggaggaggaggagagggagaggggggacagg
gaggaaggccctgccacatctgggacacccggggaagttctccctcaggaaagaaacctt
ctgccccagaatcactgctttttatctgaggaaggtgtcctgtggagtggggctgatggc
agcaaggaggaagaggagaacgaggagaggaagatgggggacagggagggaggctgccct
gacagtactggaaccactgtggagttgctgagggaggtcagggatgttggggaccagccg
gcagtagtggcacttcacctcttcaccccccacggcctcatcaccatgcggaagaacagg
aaggtctggctcaacggggtccccaccccctgcccgcggagttcccgggaccgttga

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