Geospiza fortis (medium ground-finch): 102042379
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Entry
102042379 CDS
T03755
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gfr04054
]
102042379
Pattern recognition receptors [BR:
gfr04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
102042379
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
TIR
TIR_2
LRR_5
LRR_14
LRR_9
LRR_LRWD1
LRR_6
Motif
Other DBs
NCBI-GeneID:
102042379
NCBI-ProteinID:
XP_005431278
LinkDB
All DBs
Position
Un
AA seq
998 aa
AA seq
DB search
MCTPPLVTLVTLVMVPAGVFPYNCIQAPWDPGLFRCIQRFLSTVRAAVGDLPSTATSLNL
SVNILRQVPPSAFAHLPQLYTLDLTHNQLELLAPGAFSGLSALAHLDLAHNNISVLATGV
FTGLGNLSTLRLDHNPLQKVAPRAFQPLPAPSRLWLRGGRLSALEPVAMAVGNLTHLDVL
DLCDNMLSTLGPGLPPTLRVLYLCNNSLGALSGATPEVIPPGLRVLDLSYNNISDPALLS
HLCLNNLTHLHLAGNLLDVVQLLRVAGISPRQVDVSGLQVNTSGLEYLCKQLRGQRLQKL
QLQRMNITSMPNRALAKCPVLGALDVSGNRLRDLGCIGPLRQLRLDVNGLARLHRAALRG
LRNLRHLRLDNNLLTDLLPGSFADLHQLEDLNLRNNRVAVLFPGTFKGLDRLQTLDLGGN
KLRHLAAKAFQGLPRLCRLYLDRNRLLEVRVAASQPVQVTLGVLDLRANALRYLSRHLRQ
LPPFRYLRNLYDLKLQAQQPYGMRVVPQRFFQGLSALRSLYLSQNSLSAIPADAFDDLAQ
LRYLTLADSSNGMGHLPAGIFKNLSQLRSLNLESAGLRSLGPEVFGNLTRLKELRLAKNE
LRTLDVTLATHLPALRYLDLRKCPLSCSCANAWLPAWLARGPVQVVYLYNYTCGEVGGAS
TYLHCFDTFVCYLDMGRYLFAGTAPAVLLLLVLPLLHHRGYWRLRYQLFLLRAWARGHWR
REQRRYTYDTFVSYNSGDERWVLEELVPELERGALRLCLHHRDFRPGRAIVDNIVDAVYN
SRHTVCVVSRGYLRSEWCSLEIQMASYRLFDELRDVLVLIFLEDIPEAELSAFHRMRRVL
LRRTHLRWPSEPPAQPLFWAKLRCALSGGEEEEERERGDREEGPATSGTPGEVLPQERNL
LPQNHCFLSEEGVLWSGADGSKEEEENEERKMGDREGGCPDSTGTTVELLREVRDVGDQP
AVVALHLFTPHGLITMRKNRKVWLNGVPTPCPRSSRDR
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgtgcactccaccgctggtgacactggtgacactggtgatggtgcctgcaggggtcttt
ccctacaattgcatccaggcaccatgggaccctgggctgttccgctgcatccagcgcttc
ctgagcaccgtgagggctgcagtgggcgacctcccctccactgccacatccctcaacctc
tctgtcaacatcttgcgccaggtgccccccagtgcctttgcccacctgccgcagctctac
acccttgatctgacccacaaccagctggaactcctggccccaggggctttctcagggctg
tcagcactggctcacctagacctggcccacaacaacatctcagtgctggccacaggtgtg
ttcaccgggctgggcaacctgagcacactgcggctggaccacaatccgctacagaaggtg
gccccgagggctttccagccgctgcctgcccccagcaggctctggctgcggggtggccgg
ctcagcgcactggagcctgtggccatggctgtggggaatctgacacacctagacgtgctc
gacctgtgtgacaacatgctgtcaacactgggcccggggctgccgcccacactgagggtc
ctgtacctctgcaacaactccctgggagctctttcaggggccactcctgaggtgataccc
ccagggctgcgtgtgctcgacctgtcctacaacaacatctcggaccctgccctgctctct
cacctgtgcctgaacaacctgacacacctgcacctggctgggaacctgctggacgtagtg
cagctgctgcgcgtggctggaatctccccacgtcaggtggatgtgtcagggctacaggtg
aacacaagtggcctagaatacctgtgcaagcagcttagaggacagaggctgcagaagctg
cagctgcagcgcatgaacattacatcaatgcccaacagggctctggccaagtgtccagtg
ctgggtgccctggatgtgtctggcaatcggctgcgggatttgggctgcataggacccctg
cggcagctgcggctggatgtgaatgggctggcacggctgcaccgcgcagcactgcgtgga
ctccgcaacctgaggcacctgcgccttgacaacaacctgctcactgacctcctgcctggc
tcctttgctgatctgcaccagctggaagacctcaacctgcgcaacaaccgtgtggccgtg
ctcttccctggcaccttcaagggacttgaccgtctgcagacccttgacctgggcgggaac
aagctgcggcacttggcagccaaggcattccagggcctcccgcggctttgccggctttac
ctggaccgcaaccggctgctggaggtgagggtggctgcatcccagccggtgcaggtgaca
ctgggcgtgctggacctgcgtgccaatgcgctgcgctacctgagccgacacctgcggcag
ctgccacctttccgctacctgcgtaatctctatgacctgaagctgcaggcgcagcagcca
tatgggatgcgtgtggtcccacaacgcttcttccagggcctcagtgccttgcgctcactc
tacctgtcacagaactcactctcagccatccctgctgatgccttcgatgacctggcacag
ctgcggtacctgacgctggctgacagcagcaacgggatgggccacctgcctgccggcatc
ttcaagaacctgagccaactgcgcagcctgaacctggagagcgcaggactgcgcagcctt
ggccctgaggtctttggcaacctgacacgactgaaggagctgcgcctggccaagaacgag
ctgcgtacattggatgtgactctggccacccacctccctgccctgcgctatctggacctg
cgcaagtgcccactgagttgcagctgtgccaatgcctggctgcctgcctggctggcacgt
gggccggtgcaggtggtctatctgtataactacacatgtggtgaggtgggtggggcctcc
acatacctgcactgctttgacacgtttgtgtgctacctggacatggggcggtacctgttt
gcagggacagcaccggctgtgctgctgctgctggtgctgccactgctgcaccaccgtggg
tactggcggttgcgctaccagctgttcctactgcgtgcctgggcacgtgggcactggcgg
cgggagcaacggcgctacacatacgacacctttgtgtcctacaactccggggatgagcgg
tgggtgctggaggagttggtgcctgagctggagcgtggagccttgcggctctgcctgcac
caccgtgactttcgccccggccgcgccatagtggacaacatcgtggacgctgtgtacaac
agccggcacacggtgtgtgtggtgagccgcgggtacctgcgcagcgagtggtgttcactg
gagatccagatggccagctatcgcctcttcgatgagctgcgcgatgtccttgtcctcatc
ttccttgaggacatccctgaggccgagctctcggccttccatcgcatgcgccgtgtgctg
ctgcggcgcacacacctgcgctggccctctgagccccctgcacagcccctcttctgggca
aagctcaggtgtgccctgagcgggggggaggaggaggaggagagggagaggggggacagg
gaggaaggccctgccacatctgggacacccggggaagttctccctcaggaaagaaacctt
ctgccccagaatcactgctttttatctgaggaaggtgtcctgtggagtggggctgatggc
agcaaggaggaagaggagaacgaggagaggaagatgggggacagggagggaggctgccct
gacagtactggaaccactgtggagttgctgagggaggtcagggatgttggggaccagccg
gcagtagtggcacttcacctcttcaccccccacggcctcatcaccatgcggaagaacagg
aaggtctggctcaacggggtccccaccccctgcccgcggagttcccgggaccgttga
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