Geospiza fortis (medium ground-finch): 102042421
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Entry
102042421 CDS
T03755
Symbol
NVL
Name
(RefSeq) nuclear VCP-like
KO
K14571
ribosome biogenesis ATPase
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
102042421 (NVL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gfr03009
]
102042421 (NVL)
Ribosome biogenesis [BR:
gfr03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
102042421 (NVL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_16
AAA_22
AAA_5
AAA_2
AAA_14
TIP49
AAA_28
Mg_chelatase
AAA_33
nSTAND3
RNA_helicase
Vps4_C
NPHP3_N
AAA_17
ABC_tran
NACHT
Viral_helicase1
AAA_18
Rad17
AAA_3
IstB_IS21
TsaE
Zeta_toxin
Sigma54_activ_2
ATPase
Parvo_NS1
Cytidylate_kin2
Sigma54_activat
DUF815
DUF7366
Motif
Other DBs
NCBI-GeneID:
102042421
NCBI-ProteinID:
XP_005427081
UniProt:
A0A6I9HP15
LinkDB
All DBs
Position
Un
AA seq
739 aa
AA seq
DB search
MNSSLLSLYKKGNPDSVPSTPKNEPVETSPRVRTAPQTSTLTPESRGDRPVSDGGWFIDK
TPDGKDFFIDLSEDGEGEEKKLISEKSTDFSVLESERKKTKGRRVKRKKGEFPDVDGEIE
SMLLKKVRNKGSELYHPSVKFEDVGGNDETLKEICKMLLHIRHPEVYTHLGVVPPRGFLL
HGPPGCGKTLLAQAIAGELELPMLKVAATEIVSGVSGESEQKLRELFEQAVSSAPCVLFI
DEIDAITPKREVASKDMERRIVAQFLTCMDDLNNVAATTQVLVIGATNRPDSLDPALRRA
GRFDREICLGIPDEGAREKILPTLCRKLKLPESFEFRHLARLTPGYVGADLMALCREAAM
GTVSRVLITSEEHRNKHTHSGGSTAEGSPGIGADIVEEEGTNQPELPPKDELQRLLDLLK
EQAPLPEEQLQKLCIEMNDFIVALSSVQPSAKREGFVTVPDVTWADIGALEDVREELTMA
ILAPVRNPEQFKALGLTTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYV
GESERAVRQVFQRARNSAPCVIFFDEVDALCPRRSDRESGASVRVVNQLLTEMDGLQNRQ
QVFIMAATNRPDIIDPAILRPGRLDKTLYVGLPPPEDRLAILKTITKDGTRPPLDSDVSL
EEIAYSEHCDCYTGADLSALVREASICALRQEMALQNTQSKKEIKISRKHFEEAFRKVKS
SVSKQDQIMYEELQKSLCR
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgaacagttccctgctgagcttgtacaagaaaggaaatcctgattctgttccatccact
ccaaaaaatgagccagtggagacctctcctcgtgtgagaacagcacctcaaacaagcacc
ctcacaccagaatccagaggtgacagaccagtctctgatggtggctggttcattgataaa
actcctgatgggaaagacttcttcattgacctttctgaggatggagaaggagaggaaaag
aaactgatttctgagaaatcaacagacttttctgtcttggagagtgaaagaaagaagaca
aagggcaggagagtaaaaaggaaaaaaggagaatttccagatgtagacggagaaattgaa
tccatgttacttaagaaagtgagaaataaggggtcagagctttaccacccttcagtgaag
tttgaggatgtaggaggcaatgatgaaacattaaaggaaatctgcaagatgctccttcac
atccgtcatcctgaggtctacacccacttaggggtggttccacctcggggcttccttttg
catgggccccctgggtgtgggaagacactgctggcacaggcaattgctggggagctggag
ctcccaatgttgaaggtggcagcaacagagattgtgtctggagtgtcaggggaatctgag
cagaaactgagggagctctttgagcaggctgtgtccagtgctccttgtgtcctgttcatt
gacgagatcgatgcgatcacccccaagagagaggttgcatccaaggacatggagaggagg
attgtagctcagttcctgacttgtatggatgacttgaataatgtggctgccactacccag
gtccttgttattggagcaacaaacagacctgactccctggaccctgccctgaggagagct
gggagatttgacagagaaatttgtttagggatcccagatgaaggggcaagagagaaaatt
cttccgactctgtgtcgcaagctgaagctcccggagtcgtttgagttccgccacttggcg
cggctgactccgggctacgtgggggctgatctgatggccctgtgcagggaggcagccatg
ggcacggtcagcagggtcctcataacatctgaggagcacaggaataagcacacacactct
ggggggagcactgctgaaggaagcccagggataggagcagacatcgtggaggaagagggc
accaaccaaccagaacttccacctaaggatgaattgcagagacttttggatttgctgaag
gagcaagcccccttgcctgaggagcagctgcagaagctgtgcattgagatgaatgatttt
attgttgcactgtcatcagtgcagccctctgccaagagagaaggctttgtcacagtccct
gatgtgacatgggcagacattggagccctggaggatgttcgggaggagctgactatggca
atattggcacctgtgagaaacccagagcagttcaaagctctgggcctgactactccagct
ggtgtcctgcttgcagggcctccagggtgtggcaaaacactgttagctaaggctgtggca
aacgagtctggactgaacttcatatctgtgaaaggtcctgagctgctaaatatgtacgtg
ggtgaaagtgagcgtgccgtacgccaggtgttccagcgggcccggaattctgccccctgt
gtgattttctttgatgaagttgatgctttgtgccctcggaggtctgaccgtgagtcagga
gccagcgtgcgggtggtgaaccagctcctcaccgagatggacgggctgcagaatcgacag
caggttttcattatggctgctacaaacaggccagatatcattgacccagctatcctgcgt
cctggtaggctggataaaacactctatgtgggtttgccaccacctgaagatcgacttgct
attctaaaaaccatcaccaaagatggcaccaggcctcccctggacagtgatgtgagcctg
gaggaaattgcttacagtgagcactgtgattgttacacaggggcagacctttcagctctg
gtgcgtgaggcttccatttgtgccttgagacaggaaatggccctgcagaatactcaaagc
aaaaaggaaatcaagatttctcgtaaacactttgaagaagctttcaggaaagtgaagtct
tcagtgtccaaacaggatcaaataatgtatgaagagctgcagaagtcactgtgcaggtga
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