Geospiza fortis (medium ground-finch): 102042424
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Entry
102042424 CDS
T03755
Symbol
AP3B1
Name
(RefSeq) adaptor related protein complex 3 beta 1 subunit
KO
K12397
AP-3 complex subunit beta
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
102042424 (AP3B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gfr04131
]
102042424 (AP3B1)
Membrane trafficking [BR:
gfr04131
]
Endosome - Lysosome transport
Others
AP-3 complex
102042424 (AP3B1)
Endosome - Golgi transport
102042424 (AP3B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP3B1_C
AP3B1_C_2
Cnd1
SEEEED
HEAT_2
INTS1_R4
HEAT_GCN1
MOR2-PAG1_C
Motif
Other DBs
NCBI-GeneID:
102042424
NCBI-ProteinID:
XP_005427334
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Position
Un
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AA seq
1050 aa
AA seq
DB search
MLESSKDSAKLDAMKRIVGMIAKGKNASELFPAVVKNVASKNIEIKKLVYVYLMRYAEEQ
QDLALLSISTFQRALKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEASSDLSPYVRKN
AAHAIQKLYSLDPEQKEMLIEVIEKLLKDKSTLVAGSVVMAFEEVCPDRIDLIHKNYRKL
CNLLVDVEEWGQVVIIHMLTRYARTQFLSPWKEVDEVVDEYSENNFYESDEEQKEKDQKL
KTTYTMDPDHRLLLRNTKPLLQSRNAAVVMAVAQLYWHLAPKSEAGIVSKSLVRLLRSNR
EVQYIVLQNIATMSIQRKGMFEPYLKSFYVRSTDPTMIKTLKLEIMTNLANEANISTLLR
EFQTYVRSQDKQFAAATIQAIGRCATNITEVTDTCLNGLVCLLSNRDEIVVAESVVVIKK
LLQTQPAHHGEIIKHMAKLLDNITVPVARASILWLIGEYCERVPKIAPDVLRKTAKSFTN
EDDLVKLQILNLGAKLYLTNSKQTKLLTQYVLNLGKYDQSYDIRDRTRFIRQLIVPNEKS
GALSKYAKKIFLAQKPAPLLESPFKDRDHFQLGTLSHTLNSRATGYLELSDWPEVAPDPS
VRNVDVAESAKEWTGILGKPKKEKPTEKFYSESEEEEDESASTSSSGKWSGSDSESEKED
KEEGSSDESSGSSSPSEESTDSESDSKESAAKKTCRAVNESDSEDIKKKAEGISNKRSTS
SSSDTEYTSSDECSSGSKSESDSKSDSESGKSRNEKEEKTVQDRKTPKNQDMFLLDLDDF
CPVTTPVAVPTAAVLSPSLAADLEGLSLSSSSVIDVTMQVSVPTQTHELLHRMSGKGLAA
HYHFSRQPGIFGDRMVPVQVTVTNTTDQKIENIHIGEKKLPPGMRMHEFDPIECLEPGGS
ITATMGIDFCDSTQTASFQLCTKDDHFNVNIQPPVGELLLPVTMSEKDFKKEQGMLTGMN
ETSTTIAVAPQNSTRLVIIERVVKAANLGVVPSGQDNIHRFAAKTVHSGSLMLVTVELKE
SSTAQLIINTEKTVIGSVLLQELKPVLSQG
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgttggaaagcagtaaagattctgcaaagctggatgcaatgaaaaggattgttgggatg
attgcaaagggaaaaaatgcttctgagctgtttcctgctgttgtgaagaatgttgccagt
aaaaatattgagataaaaaagcttgtgtatgtttatctgatgcgctatgcagaggagcag
caagatctagcattattgtccatcagtactttccagcgtgctttgaaagatcctaatcag
ttaatccgtgcaagtgctttaagagttttatccagtatacgtgtcccaattattgttcct
attatgatgcttgctattaaggaggcctcttctgatttatctccttatgtgagaaaaaat
gcagcccatgcaatccaaaaactgtacagtcttgatccagagcaaaaggaaatgttgatt
gaagtgatagaaaagcttttgaaggataaaagtacgctggtagctgggagcgtggtgatg
gcgtttgaggaagtgtgtccagatagaatagatctgattcacaagaactaccgaaagctc
tgtaacttgctggttgatgtggaagagtggggtcaagttgttataatccacatgttaact
cggtatgcgcgtacgcagtttttaagtccatggaaggaggttgatgaagtggtggatgaa
tacagtgaaaataatttctatgaatctgatgaagaacagaaagagaaggatcagaaattg
aaaaccacctatactatggacccggatcacaggctgctgttacgaaatacaaagcccctg
cttcagagccgaaatgctgctgtggtaatggcagttgcacagctttactggcatttggca
ccaaaatctgaagctggtattgtttctaagtcattggtgcgtttactccgtagtaacaga
gaggtgcagtatattgtcctgcaaaatattgccactatgtcaattcagagaaagggcatg
tttgaaccttatctgaagagtttctatgttagatcaactgatccaactatgatcaaaaca
cttaagcttgaaataatgacaaatttagcaaatgaagccaacatatcaactctgcttcga
gaatttcagacttacgtgaggagccaagacaagcagtttgctgcagctacgattcaggca
ataggcagatgcgctactaacatcactgaagtgactgacacgtgcctcaacggcctcgtc
tgtttgctgtccaacagggatgaaattgtagttgctgaaagtgttgttgtcattaagaaa
ctgctgcaaactcagccggcacaccacggtgaaattattaagcatatggccaaactcttg
gataacattacagttccagtagccagagccagtatcctctggctcatcggtgagtactgt
gaacgggttccaaagatcgcacctgatgttctgaggaagacagccaagagcttcacgaat
gaagacgaccttgtaaagttgcagatcttaaatttgggtgcaaaactctacttaacaaat
tcaaagcagacaaaattgcttacccagtatgtattaaatctcggcaagtatgatcaaagc
tacgacatcagagaccgtacaagatttattaggcagcttattgttccgaatgagaagagt
ggagctttaagcaaatatgcaaaaaaaatatttctggcacagaaacctgccccattgctt
gagtctccttttaaagatcgggatcatttccagcttggcaccttgtctcacacactgaat
agccgagccactggttacctggagctgtccgactggccagaggtggcacctgacccctct
gtccgaaatgtcgacgtggctgagtcggcaaaggaatggactggaattctaggcaagcca
aagaaggagaaacctactgaaaagttctactctgaatcagaagaggaggaagatgagtct
gccagtaccagttcatcaggtaagtggagtgggtctgacagtgaaagtgagaaggaagat
aaagaggaaggcagcagtgatgagagtagtgggagttcctctcccagtgaagaatcaact
gacagtgagtcagacagcaaagaaagtgctgctaagaaaacatgtagggctgtcaatgaa
agtgattcagaggatataaaaaagaaagcagaggggatttccaacaagagaagcacatcc
agttcctctgatacagagtacacttcatcagatgaatgttcttcaggatccaagtcagaa
tctgactctaaaagtgactctgagtctggaaaatctagaaatgagaaagaagaaaaaaca
gtacaagatagaaagactccaaaaaaccaagacatgtttctcttagatttagatgatttt
tgtcctgtaacaactcctgtggcagttcctacagcagctgttttgtccccaagtttagca
gcagacctagagggattaagtctgtcgagttcatcagtcattgatgtcactatgcaagtc
tctgtgccaacacaaacacatgaactgcttcatcgaatgagtgggaaaggattagcagct
cactatcacttctcaagacagccaggcatttttggtgatcgtatggtacctgtgcaagtg
acagtaacaaatacaactgatcagaagatagagaacattcacattggagagaagaaatta
cctccaggcatgaggatgcatgagtttgatccaatagagtgccttgagcctggaggatcc
attactgctaccatgggtattgacttctgtgattctacccagacagccagtttccagttg
tgcacaaaggatgatcacttcaatgttaacattcaaccccctgttggagaactgctcctg
cctgtcactatgtcagagaaagattttaagaaggagcaaggaatgctgacaggaatgaat
gagacatccactacaatagctgttgctccacagaactctactagacttgtaataattgag
agagtagtgaaagcagctaacctgggtgtagttccttctggtcaagataacatacacagg
tttgcagctaagactgtgcacagtgggtcactgatgctagtcacagtggagctgaaggag
agctctacagcacagctcatcataaacactgagaaaactgtgattggttctgttctgctg
caggagctgaagcctgtcctgtcccaggggtaa
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