Geospiza fortis (medium ground-finch): 102042427
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Entry
102042427 CDS
T03755
Symbol
ARHGEF28
Name
(RefSeq) Rho guanine nucleotide exchange factor 28
KO
K21072
A-kinase anchor protein 28
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gfr04131
]
102042427 (ARHGEF28)
Membrane trafficking [BR:
gfr04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
102042427 (ARHGEF28)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
PH_16
C1_1
C1_2
Ank_2
Motif
Other DBs
NCBI-GeneID:
102042427
NCBI-ProteinID:
XP_014165496
LinkDB
All DBs
Position
Un
AA seq
1661 aa
AA seq
DB search
MCEGLETLRLWVAPPGTITNSAKMRLCSQSLTWVRLVRLDVAYGDVEEVLLPAGQVTIRA
KFDKDIYLPVDAEFYLIYDGSLKRHIVVAERLSDNTLQSIAPGHGYQEAVSVSVLMYMVG
FSPVVLGSCPITYRENLSCKLPRFLVDCTECVTASSHKMLLDKFGLRMKDLQYLDNDLMM
AVAYEKLPSTWNILGSCPEKPKQRETVLHLVMKLGLVKLSLFLAAQPGGSSALALPIEDG
AAPLDLALQNGHSKLVEIFTNFQGSQSLDISRAEISKGACIQFVHSSVALALTFSHTAHR
LPESDIKLFRKYFWDRPLLYQSFNSNEVETVEGPKMPCGTTRFVEGPVSLASDELSQGDT
KPFXDSGGPSKENEDSVFLAIEHRHSTLDILRKLKSPPTFFAATRLSPMLSGSDEVYANC
MVVDQAGDLKPNYIHGDGVSSEMCLNPTNSVSMDMSSSSLSLEENDQFMYLPNEESQRPV
KKEENTGLRHGISPSHLYVADSYLPFKTHGFIKDRGQIYADMKRRSSSLDDLEVDNGSGG
VSDRSHVHYRPLSSSAAMASSRDGLDLPTSLQPKEFAVFGVRSRSYSYSSSKGVVGRPRI
PRGFGAGDSNGERAYSLPEQCREQRYECVSRRAGSRIQEEGWNKYVVPSKNESEKYKVSR
TFSFLMNRMTSTRNKGKTKNKDTKDKEKPTRHNFTNGTFPGVVPCMVCEKALLGKESLQC
SYCSVIVHKSCKECAPVCTKKSQEKYHSKNKVQVGVTYSLPGDISQMVLSSVHPSFSVPI
GLSPGKREASQQPYLLSKSIPGASLERRATQFSGQDSETSTWKSKSQSEEMLQALGTFSS
MDAFMMEDDVDLSQWTDLCTDAEEFEADSWSLVVDPMFCSKQEKDVVKRQDVIFELMQTE
VHHIHTLFIMSEIFRKGMKEELQLDHSIVDRIFPCLDELLEVHRQFFCRMKDRRQESCTA
GSERNFVISRIGDILVQQFSEENATKMEKIYGEFCSHQKEAVNLFKELQQNKKFQNFIKL
RNSNLLARRRGIPECILLVTQRITKYPVLVERILQYSKEGTEEHKDLCKALRLIKDIIAT
VDLKVNEYEKKQKLLEILCRTENKTYTKLKNGHVFRKQDLMRKERILLHEGLVYWKTATG
RFKDTLALLLTDVLLFLQEKDQKYIFAAVDQKPSVISLQKLIVREVANEERGMFLISASS
VGPEMYEVHTSSKCPKQMGCCCPEEEEEVVKMSESDEDRRTAEAKAYRIQKYQESLSNQD
QQICSYLEEKLRIYAELGDMCGFEDVHVEPHLLIKPDSGETPQAASLLAAALREVESLHT
AVTTSQVSEIDRSPEESTEELSVKHRFATNEILESVLGDAERKEIEESPEIDLSVEKEMA
GADLEDKGANMNFSESTGTEIVQAIQNLTRLLYSMQAALAIQDSHKELHRLLLQENEKTS
RSHGSRLNLVLEQEKYQNLEKQRMELANIHKTKQQFQQEQQRWLRECDQRQREQEARVGR
LEQREDNVKMQKKLVWHWKHGQQNNLFSHTGDYEIMGHNQLDSLHGENAFYFNEAVVCVS
LRRINRSNSSLVYEDGVYGMNISNSDVAGTSENQVDLKMDTSCQPALSSALWKSTSPYQQ
MSFSCKSNKDSFNNVVKFRRRGMAMLQQCLSSHFGAVGSAE
NT seq
4986 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgagggcctggagactctcagactttgggtagctccaccaggcaccatcactaat
tcagcaaaaatgaggttgtgttcccagagtctgacatgggtcagattagtgcggctggat
gttgcttatggtgatgtggaagaggtgttgctgccagctggacaagtgactatacgtgca
aaatttgacaaagacatttacctcccagtggatgctgagttttacttgatttatgatgga
tccctgaagagacacatagtggttgctgagcgacttagtgacaacactcttcagtccata
gctccaggccatggataccaagaagcagtttctgtgtctgtgttaatgtacatggtgggt
ttctcacctgtggtcctcggcagctgtcccatcacttacagagagaatctgtcatgcaag
ttgcctcgctttctggttgattgcacagaatgtgtcactgccagtagtcacaagatgttg
ctggataagtttgggttaaggatgaaagatctgcagtacctggataatgatttgatgatg
gctgttgcttatgaaaagttgccttcaacctggaacatccttggaagctgcccagaaaag
cctaaacaaagagaaactgttctccatcttgtgatgaagttgggcttggttaagctttcc
ctgttcttggcagcccagcctggagggtcatcagccttagcattacctattgaggatgga
gcagcacccttagatttggctttacagaatggacactccaaacttgttgagatctttaca
aacttccagggcagtcagtcgcttgacatttcaagagcagagatcagcaagggtgcctgc
atacagtttgttcattcatctgtagctctggcactgacgttcagtcacactgcgcatcgc
ttgccagagtcagacattaagctcttcagaaaatacttctgggacagacctcttctttac
cagagttttaattcaaatgaagttgagactgtggaaggtccaaaaatgccctgcggtaca
acacgctttgtagaaggtcctgtgagcttggcttctgatgagttgtcccagggtgataca
aagcctttctgagactctgggggtccttctaaagaaaatgaagatagtgtctttttggcc
atagagcacagacactctacccttgatattcttaggaaattgaagtctccccctactttc
tttgctgcaaccagactttctcccatgctgagtggaagtgatgaagtatatgcaaactgc
atggtagtagaccaggctggagacttaaagcctaactacattcatggagatggtgtcagc
agtgaaatgtgtctgaaccctaccaactcagtctcgatggatatgagctcttcatctctc
tcccttgaggagaatgatcaatttatgtatctcccaaatgaagaaagtcaaaggccagta
aaaaaagaagaaaacacaggattaagacatggcatttcaccttctcatctgtatgtagca
gattcatatcttccattcaagacccatggatttattaaggatcggggccaaatttatgct
gacatgaaaagaagaagttcaagtctcgatgaccttgaagtagacaatggaagtggaggt
gtgtcggacagatcccatgttcactaccgtcccctcagctcttcagcggccatggcttct
agcagagatggactggacttacctaccagtctgcagcccaaggaattcgcagtgtttggg
gttcggtcacgctcctattcctactcctcatccaaaggcgtagtgggaagacctcgcatt
cctcgcggctttggagctggggattcaaatggagagcgcgcgtacagcctgcccgagcag
tgccgggagcaaaggtatgagtgcgtgtcacggagagccggcagcaggattcaggaagag
ggatggaataaatatgttgtaccctcaaaaaatgagtctgaaaaatataaagtgagtcgg
actttcagctttctgatgaacaggatgaccagcacacggaataaaggcaagacaaaaaat
aaagataccaaagataaggagaaaccaaccaggcacaattttacaaatgggactttccca
ggagttgtcccatgtatggtctgtgaaaaggccctcctaggaaaggagtcactgcaatgt
tcttattgcagtgtgattgtgcataaaagctgcaaggagtgcgctcctgtgtgcaccaag
aaatcccaggagaaataccatagtaaaaacaaggtccaggttggtgtaacatattccctg
cctggagacatttcacagatggtgctgtcctcagtgcatccttctttctcagtgcctatt
ggactgtctcctggaaagagggaagcctcacaacagccctacctcttgtccaaaagtatc
cccggtgccagtttggaaagaagagctacacaattttctggacaagactctgagactagc
acctggaagtccaagtcacagtctgaagagatgttacaagcattagggaccttttcttca
atggatgcttttatgatggaagatgatgtggatttgtctcagtggactgatctctgcaca
gatgcagaagagtttgaggcagactcctggagtcttgttgtggatccaatgttctgtagc
aagcaagaaaaggatgtcgtcaagcggcaggatgtcatatttgagctgatgcaaacagaa
gtacatcacatccataccctgttcattatgtctgaaatattcaggaaagggatgaaggaa
gaactgcagcttgaccacagcatagtggacagaatattcccctgcttagatgagctactg
gaggtgcacaggcaattcttctgcagaatgaaggacaggcggcaggaatcgtgtacggca
gggagcgagcgtaattttgtcatcagcagaattggggacatccttgtgcagcagttttca
gaggaaaatgcgactaaaatggaaaaaatatacggagagttttgtagccatcagaaagaa
gctgttaatctcttcaaagagctgcaacaaaacaagaagttccagaattttattaaactg
agaaatagcaacctgttggcacgacgccgaggaatccctgaatgcattttgctcgtcacc
cagcgaatcaccaaataccctgttctggttgaaaggatattgcaatactcaaaagaagga
acagaagaacataaagacttgtgcaaagcccttcgtctaattaaggatataatagcaaca
gtagatttgaaagtgaatgagtatgagaaaaagcaaaagctgttggaaattctctgtaga
actgaaaacaaaacatacacaaaactgaaaaatggccatgtttttaggaaacaagacttg
atgaggaaagagaggatacttcttcatgaaggcttagtgtattggaagacagccactggt
cggttcaaagacaccttagctctgcttctaactgatgtactactgttcttacaagaaaag
gatcaaaaatacatctttgcagctgttgaccagaagccttcagttatctcccttcagaag
ctcattgtaagagaagtagccaacgaagaaagggggatgtttctgatcagtgcttcatct
gtggggcctgagatgtatgaggttcataccagctccaaatgtccaaagcagatgggatgt
tgttgtccagaggaagaagaagaagtagtaaaaatgagtgaatctgatgaggacaggcgt
actgctgaggccaaggcatacagaattcagaaatatcaagaatcactgagtaaccaggac
cagcaaatctgcagttatttagaagaaaagttgcgtatctatgcagaactgggagatatg
tgtgggtttgaagatgtccatgtagaacctcacctgcttatcaaacctgattccggagaa
actccacaggctgcttcactgctggcagcagcactcagagaagttgaaagtctccacact
gctgtaacaacatcacaagtgagtgaaatagacagatcaccagaggaaagtactgaggaa
ttaagtgtgaagcatagattcgctaccaatgaaatactggaatctgttctgggtgatgca
gaaagaaaagaaattgaagaatcaccagaaattgatctcagtgttgaaaaggaaatggca
ggtgctgatcttgaggataagggagcaaatatgaatttttcagaatctacagggacagag
attgtacaagcaatccagaacttaacccgtctcttatacagcatgcaggcagcactggct
atccaggacagccacaaagagctccataggttactcctgcaagagaatgagaagaccagt
cggagccatggttctcggctgaacctcgttttggaacaagagaaataccagaatctggaa
aaacaaaggatggaactggccaacatacacaaaacgaagcagcagtttcagcaagagcag
cagcggtggctgcgagaatgtgaccagcggcagcgggagcaggaggcgagggtgggccgg
ctggagcagcgggaagacaatgtgaaaatgcagaagaaactcgtatggcactggaagcat
ggtcagcaaaacaacctgttttcacacacaggggactatgagataatgggacataatcaa
ttggacagcttacatggtgaaaatgcattctacttcaatgaagctgtagtgtgtgtgtct
ctaagaagaatcaacagatcaaattcttctctcgtttatgaggacggtgtctatgggatg
aatatctcaaattctgatgtagcagggactagtgaaaatcaggtggacctcaaaatggac
acttcttgtcagccagcattaagtagtgcactgtggaaatccactagtccttaccagcag
atgtctttttcctgcaaaagcaacaaggattcctttaataatgttgtgaaattcaggaga
cgtggcatggcgatgctgcagcagtgcctgagctcccattttggtgcagttggcagtgca
gaatag
DBGET
integrated database retrieval system
