KEGG   Geospiza fortis (medium ground-finch): 102042473
Entry
102042473         CDS       T03755                                 
Symbol
MLH1
Name
(RefSeq) mutL homolog 1
  KO
K08734  DNA mismatch repair protein MLH1
Organism
gfr  Geospiza fortis (medium ground-finch)
Pathway
gfr03430  Mismatch repair
gfr03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    102042473 (MLH1)
   03460 Fanconi anemia pathway
    102042473 (MLH1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gfr03400]
    102042473 (MLH1)
DNA repair and recombination proteins [BR:gfr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    MutL homologs
     102042473 (MLH1)
SSDB
Motif
Pfam: Mlh1_C DNA_mis_repair HATPase_c_3 HATPase_c
Other DBs
NCBI-GeneID: 102042473
NCBI-ProteinID: XP_014163760
LinkDB
Position
Un
AA seq 804 aa
MTEAESELPNQHSHLRCPHVKSRTHAPRRRSTSPLRNCSNTQEAPNSSTGMGMGSHPQEA
ATAPAPHQASREQRGGRGQLSPPHPASRTEGLDAKSTSIQVVVKEGGLKFIQVQDNGCGI
RKEDLDIVCERFTTSKLQKFEDLASISTYGFRGEALASISHVAHVTVTTKTADAKCAFRA
TYSDGKIKAPPKPCAGNQGTQITVEDLFYNVNTRRKALKNPNEEYAKILEVVSRYAIHNS
GISFSVKKQGDTVSDVRTLSNASTVDNIRAIFGNAVSRELIEVGCEDANLAFKMKGYITN
ANYSVKKCIFLLFINHRLVESAAMRKAIETVYAAYLPKSTHPFLYLSLEIAPQNVDVNVH
PTKHEVHFLHEDSILERVQQHVESKLLGSNSSRMYFTQTLLPGADCSSNEVVKSAANSSA
VTKGSGDKVYAHQMVRTDSREQKLDAFLQPVNNPLSAGNTEVTAEVNAGTPEGAGRPQDA
EMEEVSDLVEMVDVQEDAVQPGGPGESGHLSPETVPSRKRPREDMDVELEKDDTRKDMTA
ACTPRRRIINLTSVLTLQEEISNQAHAKLQEMLREHSFVGCVSPQWALAQYQTKLYLLNT
TKLSQELFYQILIYDFANFGVLRLSEPAPLYELSMLALEDPESGWTEEDGPKEGLAEYIV
EFLKKKTEMLKDYFSLEIDEDGNLTGLPLLIDNYVPPLEGLPMFILRLATEVNWDEEKEC
FESLSKELAMFYSIRKQYIIEESNPTNSQSEESESGSTTWKWTVEHVLYKAFRTHLLPPK
HFAEDGNILQLANLPDLYKVFERC
NT seq 2415 nt   +upstreamnt  +downstreamnt
atgactgaagctgagtcagagcttcccaaccagcacagccacctccgctgcccacacgtc
aaatcccgcacccacgctcctcgccggcgcagcacgtcccctctccggaactgctccaac
acgcaggaagctcccaacagctccacagggatgggaatgggaagccacccccaagaggcc
gcgactgcccccgcgccgcaccaagcatccagggagcagcgcggggggcgcgggcagctc
agcccgccgcacccggcatcccgcaccgagggtttggatgctaaatctacgagtatccag
gtagtagttaaagaaggtggtctgaagttcatccaggttcaagataacggctgtggtatc
agaaaagaagatctcgacattgtatgtgagagatttactacgagtaaactgcaaaaattt
gaagacttggctagtatttctacatatggttttaggggtgaggccttggctagcatcagt
cacgttgcccatgttacagtaacaaccaaaacagctgatgcaaagtgtgcattcagagct
acttacagtgatggaaaaatcaaagcccctccaaagccctgtgctggaaaccaaggaact
cagatcacagttgaagatcttttttacaatgtaaatacaagaaggaaggctttaaagaat
ccaaatgaagaatatgcaaaaatattagaagttgttagcaggtatgccatccataactca
ggcatcagcttttcagttaaaaagcaaggtgacaccgtgtcagatgttagaaccttatcc
aatgcctcaacagtggacaacatcagggccatctttggaaatgctgttagcagggaactc
atagaagtgggctgtgaagatgcaaatctggcctttaaaatgaaaggttacatcacgaat
gcaaactactctgtgaagaaatgtatatttttgctcttcataaaccatcggttggtagag
tcagccgctatgcgcaaagccatagaaactgtgtacgctgcttatttgccaaaaagcacg
cacccattcctatacttaagcctggaaatagcccctcagaatgtagatgtgaatgtgcat
cctacaaaacacgaggtccattttcttcatgaagacagtattctggagcgtgtgcaacaa
catgtagagagcaagttattgggctctaattcctcaaggatgtacttcactcagacattg
cttccaggggctgactgctcttccaatgaagttgtaaaatcagcagcaaactcttcagcg
gtgaccaaaggaagtggtgataaagtttatgcgcatcagatggtccgcactgattcccga
gagcagaaactggatgcctttcttcagccagtgaacaaccccctgagtgcaggcaacact
gaagtgacagcagaggttaatgcaggaactccagagggtgcaggcaggccccaggatgct
gaaatggaagaagtcagtgacctggttgaaatggttgatgttcaggaggatgcagtgcag
cctggggggccaggcgagagtggacacttgtctcctgagactgtgccttctcggaagaga
ccacgggaagacatggatgtagaattggagaaagatgacaccagaaaggacatgactgct
gcctgcacccctagaagaagaattatcaacttgaccagtgtgttgactctccaggaggaa
attagtaaccaggcccatgcaaaactccaggaaatgctacgtgagcactcatttgttggt
tgtgtcagtccccagtgggctctggcccagtaccagacaaaactgtaccttctcaataca
acaaaactcagccaagaactcttctaccagatacttatttatgactttgcaaactttgga
gtcttaaggttgtctgagccagctcctttatatgagctttcaatgcttgctttagaggat
cccgaaagtggctggacagaagaagatggcccaaaagaagggcttgctgagtacattgtg
gagtttctgaaaaagaagactgaaatgttgaaagattatttctctcttgaaattgatgag
gatggaaatcttactgggttgccacttctgatagacaactacgtcccaccgttggaagga
ctgcctatgtttatcctgcgcttggccacagaggtaaactgggatgaagaaaaggagtgt
tttgaaagcctgagtaaagaactagccatgttctactccatcagaaagcagtatataata
gaggaatccaacccaacaaactctcagagtgaagaatctgagtctggttcaacaacatgg
aaatggactgtggaacatgtgctttacaaagcttttaggactcatcttttacctcctaaa
cactttgcagaagatggcaacattttgcagcttgccaacctgcctgacctgtataaagtt
tttgaaagatgttga

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