Geospiza fortis (medium ground-finch): 102042473
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Entry
102042473 CDS
T03755
Symbol
MLH1
Name
(RefSeq) mutL homolog 1
KO
K08734
DNA mismatch repair protein MLH1
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03430
Mismatch repair
gfr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
102042473 (MLH1)
03460 Fanconi anemia pathway
102042473 (MLH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gfr03400
]
102042473 (MLH1)
DNA repair and recombination proteins [BR:
gfr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
102042473 (MLH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
102042473
NCBI-ProteinID:
XP_014163760
LinkDB
All DBs
Position
Un
AA seq
804 aa
AA seq
DB search
MTEAESELPNQHSHLRCPHVKSRTHAPRRRSTSPLRNCSNTQEAPNSSTGMGMGSHPQEA
ATAPAPHQASREQRGGRGQLSPPHPASRTEGLDAKSTSIQVVVKEGGLKFIQVQDNGCGI
RKEDLDIVCERFTTSKLQKFEDLASISTYGFRGEALASISHVAHVTVTTKTADAKCAFRA
TYSDGKIKAPPKPCAGNQGTQITVEDLFYNVNTRRKALKNPNEEYAKILEVVSRYAIHNS
GISFSVKKQGDTVSDVRTLSNASTVDNIRAIFGNAVSRELIEVGCEDANLAFKMKGYITN
ANYSVKKCIFLLFINHRLVESAAMRKAIETVYAAYLPKSTHPFLYLSLEIAPQNVDVNVH
PTKHEVHFLHEDSILERVQQHVESKLLGSNSSRMYFTQTLLPGADCSSNEVVKSAANSSA
VTKGSGDKVYAHQMVRTDSREQKLDAFLQPVNNPLSAGNTEVTAEVNAGTPEGAGRPQDA
EMEEVSDLVEMVDVQEDAVQPGGPGESGHLSPETVPSRKRPREDMDVELEKDDTRKDMTA
ACTPRRRIINLTSVLTLQEEISNQAHAKLQEMLREHSFVGCVSPQWALAQYQTKLYLLNT
TKLSQELFYQILIYDFANFGVLRLSEPAPLYELSMLALEDPESGWTEEDGPKEGLAEYIV
EFLKKKTEMLKDYFSLEIDEDGNLTGLPLLIDNYVPPLEGLPMFILRLATEVNWDEEKEC
FESLSKELAMFYSIRKQYIIEESNPTNSQSEESESGSTTWKWTVEHVLYKAFRTHLLPPK
HFAEDGNILQLANLPDLYKVFERC
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagctgagtcagagcttcccaaccagcacagccacctccgctgcccacacgtc
aaatcccgcacccacgctcctcgccggcgcagcacgtcccctctccggaactgctccaac
acgcaggaagctcccaacagctccacagggatgggaatgggaagccacccccaagaggcc
gcgactgcccccgcgccgcaccaagcatccagggagcagcgcggggggcgcgggcagctc
agcccgccgcacccggcatcccgcaccgagggtttggatgctaaatctacgagtatccag
gtagtagttaaagaaggtggtctgaagttcatccaggttcaagataacggctgtggtatc
agaaaagaagatctcgacattgtatgtgagagatttactacgagtaaactgcaaaaattt
gaagacttggctagtatttctacatatggttttaggggtgaggccttggctagcatcagt
cacgttgcccatgttacagtaacaaccaaaacagctgatgcaaagtgtgcattcagagct
acttacagtgatggaaaaatcaaagcccctccaaagccctgtgctggaaaccaaggaact
cagatcacagttgaagatcttttttacaatgtaaatacaagaaggaaggctttaaagaat
ccaaatgaagaatatgcaaaaatattagaagttgttagcaggtatgccatccataactca
ggcatcagcttttcagttaaaaagcaaggtgacaccgtgtcagatgttagaaccttatcc
aatgcctcaacagtggacaacatcagggccatctttggaaatgctgttagcagggaactc
atagaagtgggctgtgaagatgcaaatctggcctttaaaatgaaaggttacatcacgaat
gcaaactactctgtgaagaaatgtatatttttgctcttcataaaccatcggttggtagag
tcagccgctatgcgcaaagccatagaaactgtgtacgctgcttatttgccaaaaagcacg
cacccattcctatacttaagcctggaaatagcccctcagaatgtagatgtgaatgtgcat
cctacaaaacacgaggtccattttcttcatgaagacagtattctggagcgtgtgcaacaa
catgtagagagcaagttattgggctctaattcctcaaggatgtacttcactcagacattg
cttccaggggctgactgctcttccaatgaagttgtaaaatcagcagcaaactcttcagcg
gtgaccaaaggaagtggtgataaagtttatgcgcatcagatggtccgcactgattcccga
gagcagaaactggatgcctttcttcagccagtgaacaaccccctgagtgcaggcaacact
gaagtgacagcagaggttaatgcaggaactccagagggtgcaggcaggccccaggatgct
gaaatggaagaagtcagtgacctggttgaaatggttgatgttcaggaggatgcagtgcag
cctggggggccaggcgagagtggacacttgtctcctgagactgtgccttctcggaagaga
ccacgggaagacatggatgtagaattggagaaagatgacaccagaaaggacatgactgct
gcctgcacccctagaagaagaattatcaacttgaccagtgtgttgactctccaggaggaa
attagtaaccaggcccatgcaaaactccaggaaatgctacgtgagcactcatttgttggt
tgtgtcagtccccagtgggctctggcccagtaccagacaaaactgtaccttctcaataca
acaaaactcagccaagaactcttctaccagatacttatttatgactttgcaaactttgga
gtcttaaggttgtctgagccagctcctttatatgagctttcaatgcttgctttagaggat
cccgaaagtggctggacagaagaagatggcccaaaagaagggcttgctgagtacattgtg
gagtttctgaaaaagaagactgaaatgttgaaagattatttctctcttgaaattgatgag
gatggaaatcttactgggttgccacttctgatagacaactacgtcccaccgttggaagga
ctgcctatgtttatcctgcgcttggccacagaggtaaactgggatgaagaaaaggagtgt
tttgaaagcctgagtaaagaactagccatgttctactccatcagaaagcagtatataata
gaggaatccaacccaacaaactctcagagtgaagaatctgagtctggttcaacaacatgg
aaatggactgtggaacatgtgctttacaaagcttttaggactcatcttttacctcctaaa
cactttgcagaagatggcaacattttgcagcttgccaacctgcctgacctgtataaagtt
tttgaaagatgttga
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