Geospiza fortis (medium ground-finch): 102042488
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Entry
102042488 CDS
T03755
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03030
DNA replication
gfr03410
Base excision repair
gfr03420
Nucleotide excision repair
gfr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102042488 (RFC5)
03410 Base excision repair
102042488 (RFC5)
03420 Nucleotide excision repair
102042488 (RFC5)
03430 Mismatch repair
102042488 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gfr03032
]
102042488 (RFC5)
03036 Chromosome and associated proteins [BR:
gfr03036
]
102042488 (RFC5)
03400 DNA repair and recombination proteins [BR:
gfr03400
]
102042488 (RFC5)
DNA replication proteins [BR:
gfr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
102042488 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
102042488 (RFC5)
Chromosome and associated proteins [BR:
gfr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
102042488 (RFC5)
DNA repair and recombination proteins [BR:
gfr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
102042488 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
102042488 (RFC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
DNA_pol3_delta2
RCF1-5-like_lid
AAA
AAA_assoc_2
DNAX_ATPase_lid
DEAD
Gp44_lid
Thioredoxin_6
Hydantoinase_B
Motif
Other DBs
NCBI-GeneID:
102042488
NCBI-ProteinID:
XP_005428498
UniProt:
A0A6I9HSW9
LinkDB
All DBs
Position
Un
AA seq
260 aa
AA seq
DB search
MWIHTIPFQLNASDDRGIDIVRGPILSFASTRTIFKKGFKLVILDEADAMTQDAQNALRR
VIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLQHVIQEEGVDVTED
GMKALVTLSSGDMRRALNILQSTSMAFGKVTEENVYTCTGHPLKSDIANILDWMLNQDFS
TAYRKIMELKTLKGLALQDILTEIHLFVHRVDFPPSIRIQLLIKLADIEYRLAAGTSEKI
QLSSLIAAFQVTRDLVVAEA
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgtggatccacaccattcccttccagctcaacgcctccgatgaccggggcatcgacatc
gtccgagggcccatcctgagctttgccagcaccaggaccatctttaagaaaggcttcaag
ctggtcatcctggatgaagccgatgccatgacccaggatgctcagaacgccctgaggaga
gtgatcgagaagttcacagagaacacccggttctgcctcatctgcaactacctctccaag
atcattcccgccctgcagtcccgctgcacccgcttccgcttcgggcccctgacccccgag
ctgatggtgccgcggctccagcacgtcatccaggaggagggggtggacgtgaccgaggac
gggatgaaggctctggtgaccctctcgagcggggacatgcgcagggccctcaatatcttg
cagagcacctccatggcctttgggaaggtgacagaggagaacgtttacacctgcacggga
catcccctcaagtctgacatcgccaacatcctcgactggatgctgaaccaggatttttcc
actgcctaccgcaaaatcatggagctgaagacgctgaagggcctggccctgcaggacatc
ctcactgagatccatctcttcgtgcacagagtcgacttccccccctccatccgcatccag
ctgctgatcaagctggcagacatcgagtaccgcctggctgctggcaccagcgagaagatc
cagctgagctccctcattgctgccttccaggtcaccagggacctggtggtggctgaagcc
tga
DBGET
integrated database retrieval system